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The map label for this gene is phaC [H]

Identifier: 119386912

GI number: 119386912

Start: 1367233

End: 1369002

Strand: Direct

Name: phaC [H]

Synonym: Pden_4207

Alternate gene names: 119386912

Gene position: 1367233-1369002 (Clockwise)

Preceding gene: 119386911

Following gene: 119386927

Centisome position: 79.03

GC content: 69.38

Gene sequence:

>1770_bases
ATGACGCATAAGGTGAACACCCCCGAAGCCGGCCCCGCCGGGACCGATACCGCCCCGTATCGCACCATCGACCGGCTGCG
CGAGGCGATGGCCGCCGGATTCGGCACCGGCGTCTCGCCGCTGGCGCTTGGCATGGCGCTGATCGACTGGTCGGCGCATC
TGGCCGCCGCGCCGGGCAAGCGGCTGGAACTGGCCGACCGGGCCGCGCGCGAGACGGCCGAGCTTATGGCCCATATCGCC
GCGCTGGCCACGGACCCCAAGGCCGAGCCGGTGATCCGCCCCGGCCCGCAGGACCGGCGATTTGCCGCCGCGGCCTGGCA
GAACCCGCCCTTCAGCATCTGGGTCCAGGGCTTCCTGCTGGCGCGGCAATGGTGGCACGAGGCCACCCATGACGTGCCCG
GAACCGATCCGCATTACGAAAACCTGCTTTCGGCAATGGTGCGGCAATGGCTCGACATGGCCTCTCCGGCGAACCTGCCC
TTCACCAATCCCGAGATCATCGCCCGCAGCATGCAGACCGCCGGGCTGAACCATCTGGCCGGCATGCGCAACTGGTGCGA
GGACATGGCACGGCTCGCCGCCGGCAAGCCCCCGGTCGGAACCGAGCGGTTCCGCGTCGGTTACGAGGTCGCGGCGACGC
CCGGCAAGGTGGTGTTCCGCAATCACCTGATCGAGCTGATCCAATACGCCCCCGCGACCGAAACCGTGCTGGCCGAGCCG
GTGCTGCTGATCCCGGCCTGGATCATGAAATACTATATCCTGGACCTATCGCCGGAAAACTCGCTGGTCCGGCATCTGGT
CCAGGCCGGGCATACGGTCTTTTGCCTGTCCTGGCGCAATCCCACGGCCGACGACCGCGACCTGACGCTGGACGACTACC
GCCGCCTGGGGGTCATGGCGGCGGTCGAGGCGATCAATGCCATCCTGCCCGGGCGGGGCATCCATGCGGCGGGCTATTGC
CTGGGCGGCACGCTGCTGGCCATCGCGGCGGCGGCCATGGCCGGGGCGCGGGACGACCGGCTGGCCAGCGTCTCGCTTCT
GGCGGCGCAGACGGATTTCACCGAGCCGGGGGATCTGGCGCTGTTCGTCGACCACGACCAGCTGCACAGCCTGGAAAATG
CGATGCGGCAGCGCGGCTACCTGACGGCCGAGCAGATGCTGGGCGCCTTTCGCTTCCTGCGCTCGAACGACCTGGTCTGG
TCGCGCATGGTGCACGCCTATCTGATGGGCGAGCGCGAGCCGATGACCGACATCCTTGCCTGGAGCAGCGATTCCACCCG
CATGCCCTATCGCATGCAGGACGAATACCTGCGCCGGCTCTATCTGGAAAACGCGCTGGCCGGCGACCGGCTGCGGGCGG
ACGGCCGTCCCGTGGCGCTGCGCAACCTTCGCGCACCGATCTTTGCAGTCGGCACCGAAGAGGATTACGTCGCCCCCTGG
CGATCGGTCTATCAGCTGCATTGCCTCAGCGATGCCGAGCTGACCTTCGTGCTGGCGGACAAGGATCATCTGGCGGGCAT
CATCTTCGACCCCTCGCAGCCGGGCAGCCATTACCGCATCGCCACCCGCGGCCCGGACGATACCTGCCTGCCCCCCGAGG
ACTGGCTGCGCGCCGCCGCATGGCGCGAGGGCTCATGGTGGCCGGCCTGGAGCGGTTGGCTGGCGCGGCATTCCGCCGCC
GAGCGGGTGGCGCCCCCGGGCATCGGCGCCGCCGCCGCGGGCTATCCGGCGCTGGAGGATGCCCCGGGCAGCTATGTCCG
CCAGCGCTAG

Upstream 100 bases:

>100_bases
GCGCGCCGGCCGTTTCGACGGCGCGGCCGTGCTGGTGCCCTGAGCCGCCCGCCGGGCGCGGTGGCGCCCGGCCCATGCCT
TTCCTGCCGGGATCCCTGCC

Downstream 100 bases:

>100_bases
GCCAGCAGCGCGGCGGCCTCCATCGCCATCATGCATTCCTCGTTGGCGGGGATGACCAGCGTGGCGAAATCGCCCAGCGG
CGCCATGTGGCGCAGGATCG

Product: poly-beta-hydroxybutyrate polymerase domain-containing protein

Products: NA

Alternate protein names: PHA polymerase; PHA synthase; Polyhydroxyalkanoic acid synthase [H]

Number of amino acids: Translated: 589; Mature: 588

Protein sequence:

>589_residues
MTHKVNTPEAGPAGTDTAPYRTIDRLREAMAAGFGTGVSPLALGMALIDWSAHLAAAPGKRLELADRAARETAELMAHIA
ALATDPKAEPVIRPGPQDRRFAAAAWQNPPFSIWVQGFLLARQWWHEATHDVPGTDPHYENLLSAMVRQWLDMASPANLP
FTNPEIIARSMQTAGLNHLAGMRNWCEDMARLAAGKPPVGTERFRVGYEVAATPGKVVFRNHLIELIQYAPATETVLAEP
VLLIPAWIMKYYILDLSPENSLVRHLVQAGHTVFCLSWRNPTADDRDLTLDDYRRLGVMAAVEAINAILPGRGIHAAGYC
LGGTLLAIAAAAMAGARDDRLASVSLLAAQTDFTEPGDLALFVDHDQLHSLENAMRQRGYLTAEQMLGAFRFLRSNDLVW
SRMVHAYLMGEREPMTDILAWSSDSTRMPYRMQDEYLRRLYLENALAGDRLRADGRPVALRNLRAPIFAVGTEEDYVAPW
RSVYQLHCLSDAELTFVLADKDHLAGIIFDPSQPGSHYRIATRGPDDTCLPPEDWLRAAAWREGSWWPAWSGWLARHSAA
ERVAPPGIGAAAAGYPALEDAPGSYVRQR

Sequences:

>Translated_589_residues
MTHKVNTPEAGPAGTDTAPYRTIDRLREAMAAGFGTGVSPLALGMALIDWSAHLAAAPGKRLELADRAARETAELMAHIA
ALATDPKAEPVIRPGPQDRRFAAAAWQNPPFSIWVQGFLLARQWWHEATHDVPGTDPHYENLLSAMVRQWLDMASPANLP
FTNPEIIARSMQTAGLNHLAGMRNWCEDMARLAAGKPPVGTERFRVGYEVAATPGKVVFRNHLIELIQYAPATETVLAEP
VLLIPAWIMKYYILDLSPENSLVRHLVQAGHTVFCLSWRNPTADDRDLTLDDYRRLGVMAAVEAINAILPGRGIHAAGYC
LGGTLLAIAAAAMAGARDDRLASVSLLAAQTDFTEPGDLALFVDHDQLHSLENAMRQRGYLTAEQMLGAFRFLRSNDLVW
SRMVHAYLMGEREPMTDILAWSSDSTRMPYRMQDEYLRRLYLENALAGDRLRADGRPVALRNLRAPIFAVGTEEDYVAPW
RSVYQLHCLSDAELTFVLADKDHLAGIIFDPSQPGSHYRIATRGPDDTCLPPEDWLRAAAWREGSWWPAWSGWLARHSAA
ERVAPPGIGAAAAGYPALEDAPGSYVRQR
>Mature_588_residues
THKVNTPEAGPAGTDTAPYRTIDRLREAMAAGFGTGVSPLALGMALIDWSAHLAAAPGKRLELADRAARETAELMAHIAA
LATDPKAEPVIRPGPQDRRFAAAAWQNPPFSIWVQGFLLARQWWHEATHDVPGTDPHYENLLSAMVRQWLDMASPANLPF
TNPEIIARSMQTAGLNHLAGMRNWCEDMARLAAGKPPVGTERFRVGYEVAATPGKVVFRNHLIELIQYAPATETVLAEPV
LLIPAWIMKYYILDLSPENSLVRHLVQAGHTVFCLSWRNPTADDRDLTLDDYRRLGVMAAVEAINAILPGRGIHAAGYCL
GGTLLAIAAAAMAGARDDRLASVSLLAAQTDFTEPGDLALFVDHDQLHSLENAMRQRGYLTAEQMLGAFRFLRSNDLVWS
RMVHAYLMGEREPMTDILAWSSDSTRMPYRMQDEYLRRLYLENALAGDRLRADGRPVALRNLRAPIFAVGTEEDYVAPWR
SVYQLHCLSDAELTFVLADKDHLAGIIFDPSQPGSHYRIATRGPDDTCLPPEDWLRAAAWREGSWWPAWSGWLARHSAAE
RVAPPGIGAAAAGYPALEDAPGSYVRQR

Specific function: Unknown

COG id: COG3243

COG function: function code I; Poly(3-hydroxyalkanoate) synthetase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PHA/PHB synthase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010963
- InterPro:   IPR010941 [H]

Pfam domain/function: PF07167 PhaC_N [H]

EC number: NA

Molecular weight: Translated: 65013; Mature: 64881

Theoretical pI: Translated: 6.24; Mature: 6.24

Prosite motif: PS00092 N6_MTASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTHKVNTPEAGPAGTDTAPYRTIDRLREAMAAGFGTGVSPLALGMALIDWSAHLAAAPGK
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCC
RLELADRAARETAELMAHIAALATDPKAEPVIRPGPQDRRFAAAAWQNPPFSIWVQGFLL
CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEHHHCCCCCHHHHHHHHHH
ARQWWHEATHDVPGTDPHYENLLSAMVRQWLDMASPANLPFTNPEIIARSMQTAGLNHLA
HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCHHHHH
GMRNWCEDMARLAAGKPPVGTERFRVGYEVAATPGKVVFRNHLIELIQYAPATETVLAEP
HHHHHHHHHHHHHCCCCCCCCHHEEECEEEECCCCHHHHHHHHHHHHHHCCCCHHHHHCH
VLLIPAWIMKYYILDLSPENSLVRHLVQAGHTVFCLSWRNPTADDRDLTLDDYRRLGVMA
HHHHHHHHHHHHHEECCCCHHHHHHHHHCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHH
AVEAINAILPGRGIHAAGYCLGGTLLAIAAAAMAGARDDRLASVSLLAAQTDFTEPGDLA
HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHEEECCCCCCCCCEE
LFVDHDQLHSLENAMRQRGYLTAEQMLGAFRFLRSNDLVWSRMVHAYLMGEREPMTDILA
EEECHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHE
WSSDSTRMPYRMQDEYLRRLYLENALAGDRLRADGRPVALRNLRAPIFAVGTEEDYVAPW
ECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEHHCCCCCEEEECCCCCCHHHH
RSVYQLHCLSDAELTFVLADKDHLAGIIFDPSQPGSHYRIATRGPDDTCLPPEDWLRAAA
HHHHHHEECCCCCEEEEEECCCCCEEEEECCCCCCCCEEEEECCCCCCCCCHHHHHHHHH
WREGSWWPAWSGWLARHSAAERVAPPGIGAAAAGYPALEDAPGSYVRQR
CCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHCCCCCCCCCCCHHHCCC
>Mature Secondary Structure 
THKVNTPEAGPAGTDTAPYRTIDRLREAMAAGFGTGVSPLALGMALIDWSAHLAAAPGK
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCC
RLELADRAARETAELMAHIAALATDPKAEPVIRPGPQDRRFAAAAWQNPPFSIWVQGFLL
CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEHHHCCCCCHHHHHHHHHH
ARQWWHEATHDVPGTDPHYENLLSAMVRQWLDMASPANLPFTNPEIIARSMQTAGLNHLA
HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCHHHHH
GMRNWCEDMARLAAGKPPVGTERFRVGYEVAATPGKVVFRNHLIELIQYAPATETVLAEP
HHHHHHHHHHHHHCCCCCCCCHHEEECEEEECCCCHHHHHHHHHHHHHHCCCCHHHHHCH
VLLIPAWIMKYYILDLSPENSLVRHLVQAGHTVFCLSWRNPTADDRDLTLDDYRRLGVMA
HHHHHHHHHHHHHEECCCCHHHHHHHHHCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHH
AVEAINAILPGRGIHAAGYCLGGTLLAIAAAAMAGARDDRLASVSLLAAQTDFTEPGDLA
HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHEEECCCCCCCCCEE
LFVDHDQLHSLENAMRQRGYLTAEQMLGAFRFLRSNDLVWSRMVHAYLMGEREPMTDILA
EEECHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHE
WSSDSTRMPYRMQDEYLRRLYLENALAGDRLRADGRPVALRNLRAPIFAVGTEEDYVAPW
ECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEHHCCCCCEEEECCCCCCHHHH
RSVYQLHCLSDAELTFVLADKDHLAGIIFDPSQPGSHYRIATRGPDDTCLPPEDWLRAAA
HHHHHHEECCCCCEEEEEECCCCCEEEEECCCCCCCCEEEEECCCCCCCCCHHHHHHHHH
WREGSWWPAWSGWLARHSAAERVAPPGIGAAAAGYPALEDAPGSYVRQR
CCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHCCCCCCCCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7763712 [H]