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The map label for this gene is yfhC [C]

Identifier: 119386848

GI number: 119386848

Start: 1299595

End: 1300044

Strand: Direct

Name: yfhC [C]

Synonym: Pden_4143

Alternate gene names: 119386848

Gene position: 1299595-1300044 (Clockwise)

Preceding gene: 119386846

Following gene: 119386849

Centisome position: 75.12

GC content: 70.22

Gene sequence:

>450_bases
ATGGATTTTGCCTCGCACATGCCCACCGCGCTCGATGAGGCCCGTGCCGCCGCCCGGCGCGGCGAGGTGCCGGTCGGCGC
CGTCCTGGTGGGTGCCGACGGCGCCGTGCTGGCCCGCGCCGGCAATCGCACGCGCGAGATGCGCGACCCCACCGCCCATG
CCGAAATCCTGGCGATCCGTGCGGCCTGCGCGCATCTCGGCTCGGAACGGCTGCCGGGCGCGCGACTGTGGGTGACGCTG
GAGCCCTGCCCGATGTGTGCCGCTGCCATCTCGGCCGCACGGATCGAGATGCTCTATTACGGCGCCGAGGACCCGCGCAT
GGGCGGCGTGCGCCATGGCGCGCGGGTCTTCGACCATCCGCAATGCCATCACCGGCCAGAGATCATCGACGGCATTTCGG
CAGAAGAATCGCGCCGGCTGCTGCAAGAATTCTTTCGTGAACGCCGCTGA

Upstream 100 bases:

>100_bases
CCTGCGCATCTCTGCGGTGGCAAAGCGGGCTCTCTACGCCCAACGCAGGAAGATGGAAAGCAGTTCTTGCGCGCAAGGCA
AGCCCGCGCGAAAAGCGCGC

Downstream 100 bases:

>100_bases
GATGAGAAAACCCGCGTCGCGAAACCGTCGCGAAGGGTGCTTGCGCTGCACCGCAGCATAGTTAGGATGCCCGCCGGGCG
AACATGGGGGGACTGATGTT

Product: CMP/dCMP deaminase, zinc-binding

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 149; Mature: 149

Protein sequence:

>149_residues
MDFASHMPTALDEARAAARRGEVPVGAVLVGADGAVLARAGNRTREMRDPTAHAEILAIRAACAHLGSERLPGARLWVTL
EPCPMCAAAISAARIEMLYYGAEDPRMGGVRHGARVFDHPQCHHRPEIIDGISAEESRRLLQEFFRERR

Sequences:

>Translated_149_residues
MDFASHMPTALDEARAAARRGEVPVGAVLVGADGAVLARAGNRTREMRDPTAHAEILAIRAACAHLGSERLPGARLWVTL
EPCPMCAAAISAARIEMLYYGAEDPRMGGVRHGARVFDHPQCHHRPEIIDGISAEESRRLLQEFFRERR
>Mature_149_residues
MDFASHMPTALDEARAAARRGEVPVGAVLVGADGAVLARAGNRTREMRDPTAHAEILAIRAACAHLGSERLPGARLWVTL
EPCPMCAAAISAARIEMLYYGAEDPRMGGVRHGARVFDHPQCHHRPEIIDGISAEESRRLLQEFFRERR

Specific function: Mutation In This Protein Makes E.Coli Resistant To The Toxic Proteins Encoded By The Gef Gene Family. [C]

COG id: COG0590

COG function: function code FJ; Cytosine/adenosine deaminases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytidine and deoxycytidylate deaminase family [H]

Homologues:

Organism=Homo sapiens, GI124107608, Length=151, Percent_Identity=31.7880794701987, Blast_Score=75, Evalue=2e-14,
Organism=Escherichia coli, GI145693172, Length=143, Percent_Identity=45.4545454545455, Blast_Score=105, Evalue=1e-24,
Organism=Caenorhabditis elegans, GI17541138, Length=147, Percent_Identity=34.6938775510204, Blast_Score=87, Evalue=3e-18,
Organism=Caenorhabditis elegans, GI17554608, Length=137, Percent_Identity=32.8467153284672, Blast_Score=84, Evalue=3e-17,
Organism=Caenorhabditis elegans, GI17555996, Length=100, Percent_Identity=42, Blast_Score=79, Evalue=1e-15,
Organism=Saccharomyces cerevisiae, GI6322425, Length=158, Percent_Identity=33.5443037974684, Blast_Score=69, Evalue=4e-13,
Organism=Drosophila melanogaster, GI21355527, Length=151, Percent_Identity=40.3973509933775, Blast_Score=91, Evalue=2e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016192
- InterPro:   IPR002125
- InterPro:   IPR016193 [H]

Pfam domain/function: PF00383 dCMP_cyt_deam_1 [H]

EC number: NA

Molecular weight: Translated: 16334; Mature: 16334

Theoretical pI: Translated: 7.59; Mature: 7.59

Prosite motif: PS00903 CYT_DCMP_DEAMINASES

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFASHMPTALDEARAAARRGEVPVGAVLVGADGAVLARAGNRTREMRDPTAHAEILAIR
CCCHHHCCHHHHHHHHHHHCCCCCCCEEEECCCCEEEECCCCCHHHHCCCCHHHHHHHHH
AACAHLGSERLPGARLWVTLEPCPMCAAAISAARIEMLYYGAEDPRMGGVRHGARVFDHP
HHHHHHCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCC
QCHHRPEIIDGISAEESRRLLQEFFRERR
CCCCCCHHHCCCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDFASHMPTALDEARAAARRGEVPVGAVLVGADGAVLARAGNRTREMRDPTAHAEILAIR
CCCHHHCCHHHHHHHHHHHCCCCCCCEEEECCCCEEEECCCCCHHHHCCCCHHHHHHHHH
AACAHLGSERLPGARLWVTLEPCPMCAAAISAARIEMLYYGAEDPRMGGVRHGARVFDHP
HHHHHHCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCC
QCHHRPEIIDGISAEESRRLLQEFFRERR
CCCCCCHHHCCCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA