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The map label for this gene is 119386746

Identifier: 119386746

GI number: 119386746

Start: 1189606

End: 1190637

Strand: Direct

Name: 119386746

Synonym: Pden_4039

Alternate gene names: NA

Gene position: 1189606-1190637 (Clockwise)

Preceding gene: 119386745

Following gene: 119386747

Centisome position: 68.76

GC content: 72.77

Gene sequence:

>1032_bases
ATGAAATGGATGACCAAATCGCTGATCCCGGCCGCAGTGCTGCTGATGCTGGGCTCGCTGGCGGCGCGCGCCGAGCAGCT
GACCGTGCAGTTGCGCGGCCCGGCGCTGGCCGAATCCGCCGGATTCCTGATCGCCAAGGCGCGCGGCTATTACGCCGAGG
AAGGGCTGGCCGTCCGGCTGCGCCCCGCCGACCCCGCGGCCCCTCCCTTCGAGGCGCTGGCGCGGGGCGAGGCGGATCTG
GCGGTGGAATGGATGCCCACCGCACTGGTCGCGCGCGAGAACGGCCTGCCCGTGGTCAATATCGCACAGATCTTCGCCCG
GCCGGCGCTGCGGCTGACCTGTCGGCGCGAGGCGGGCATGGCAGGCGCCGCCGATCTGCGCGGCAAGACCGTCGGCAGCT
GGTTCGGCGGCACGGAATATCCGCTGCTGGCCTGGCTGAACCGGCTGGGATTGGTGGCCGATGACAGCCTGTCCGGCGTG
GCGTTGCCGGCGCAATGGCCAGGGACCGAGATGCTGCGCCAGAAACAGGCCGCCTGCATCAGCACGCTCAGCTATGATCC
GGCCCCGGACGAGGGGCTGGTCGAACTCGACCCGCAGGACCAGGGCGCCGCGGTGCTGGAGGACGGGCTTTACGTCCTGG
CCGGCACGCTTGCCGCCCCCGAGGCCGAGGAACGGCTGGCAGGGTTCCTGCGCGCCAGCATGCGCGGCTGGCGCGAGGCG
GTCGCGCAGCCCGAGGACAGCGCCCGGCTGATCCTTGGTCCCGATCCCGACCCGGGCGCCTTGCAACGGCAGGCCGGGAT
GCTGCGTCGCATCGGCGGGCTTCTTGCCGCCGACGGTGCGCTGGATGAGGCCGGATACCGCCGCACGGTCGAGACCCTCC
GCACCGGCGGCCCGCGCTCGGTGCTGCGCCGCGAACCGCGCGGCGCCTTCACCCATGCGATCAGCGACCGCGCCACCCTG
CCCGAAGACGCCGCCGCGACCGCAACCGCCGACCCTACAACCACCGGACCCGACGTCGCGCCGCTGCGCTGA

Upstream 100 bases:

>100_bases
CTACGAGGATGTCTATTCGCGCGGCTGACCGCCGCTCGCGGCATCGTGCAGGGTGCGACGGCTTGCGGTGCCGACACCGG
CCGTCTAACCATGGCCGGCG

Downstream 100 bases:

>100_bases
TCTGCCCCGGGCAGCCCCCCTTGCCGGTCCCGCCCGGCGCGGGCAAGAGAGGCGCATGAGCGACATTCCTTCCAAACGCC
ACAGCCGGATCGAGGACGCG

Product: ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components TauA

Products: NA

Alternate protein names: NMT1/THI5 Like Domain-Containing Protein; ABC Transporter Periplasmic; GGDEF Domain-Containing Protein; NMT1/THI5-Like Protein; Diguanylate Cyclase; NMT1/THI5-Like Domain-Containing Protein; Thiamine Biosynthesis Protein; Histidine Kinase; Diguanylate Cyclase/Phosphodiesterase; NMT1/THI5 Like Family; Periplasmic-Component Of ABC Transporter; Nlpa Lipoprotein; NLPA Lipoprotein; Nitrate/Sulfonate ABC Transporter; Diguanylate Cyclase Domain Protein; NMT1/THI5-Ike Domain-Containing Protein; PAS/PAC Sensor-Containing Diguanylate Cyclase; Multi-Sensor Signal Transduction Histidine Kinase

Number of amino acids: Translated: 343; Mature: 343

Protein sequence:

>343_residues
MKWMTKSLIPAAVLLMLGSLAARAEQLTVQLRGPALAESAGFLIAKARGYYAEEGLAVRLRPADPAAPPFEALARGEADL
AVEWMPTALVARENGLPVVNIAQIFARPALRLTCRREAGMAGAADLRGKTVGSWFGGTEYPLLAWLNRLGLVADDSLSGV
ALPAQWPGTEMLRQKQAACISTLSYDPAPDEGLVELDPQDQGAAVLEDGLYVLAGTLAAPEAEERLAGFLRASMRGWREA
VAQPEDSARLILGPDPDPGALQRQAGMLRRIGGLLAADGALDEAGYRRTVETLRTGGPRSVLRREPRGAFTHAISDRATL
PEDAAATATADPTTTGPDVAPLR

Sequences:

>Translated_343_residues
MKWMTKSLIPAAVLLMLGSLAARAEQLTVQLRGPALAESAGFLIAKARGYYAEEGLAVRLRPADPAAPPFEALARGEADL
AVEWMPTALVARENGLPVVNIAQIFARPALRLTCRREAGMAGAADLRGKTVGSWFGGTEYPLLAWLNRLGLVADDSLSGV
ALPAQWPGTEMLRQKQAACISTLSYDPAPDEGLVELDPQDQGAAVLEDGLYVLAGTLAAPEAEERLAGFLRASMRGWREA
VAQPEDSARLILGPDPDPGALQRQAGMLRRIGGLLAADGALDEAGYRRTVETLRTGGPRSVLRREPRGAFTHAISDRATL
PEDAAATATADPTTTGPDVAPLR
>Mature_343_residues
MKWMTKSLIPAAVLLMLGSLAARAEQLTVQLRGPALAESAGFLIAKARGYYAEEGLAVRLRPADPAAPPFEALARGEADL
AVEWMPTALVARENGLPVVNIAQIFARPALRLTCRREAGMAGAADLRGKTVGSWFGGTEYPLLAWLNRLGLVADDSLSGV
ALPAQWPGTEMLRQKQAACISTLSYDPAPDEGLVELDPQDQGAAVLEDGLYVLAGTLAAPEAEERLAGFLRASMRGWREA
VAQPEDSARLILGPDPDPGALQRQAGMLRRIGGLLAADGALDEAGYRRTVETLRTGGPRSVLRREPRGAFTHAISDRATL
PEDAAATATADPTTTGPDVAPLR

Specific function: Unknown

COG id: COG0715

COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36287; Mature: 36287

Theoretical pI: Translated: 4.89; Mature: 4.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKWMTKSLIPAAVLLMLGSLAARAEQLTVQLRGPALAESAGFLIAKARGYYAEEGLAVRL
CCCHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCHHCCCCEEEEECCCCCCCCCCEEEE
RPADPAAPPFEALARGEADLAVEWMPTALVARENGLPVVNIAQIFARPALRLTCRREAGM
ECCCCCCCCHHHHHCCCCCEEEEECCCEEEECCCCCCEEHHHHHHHCCHHEEEEHHHCCC
AGAADLRGKTVGSWFGGTEYPLLAWLNRLGLVADDSLSGVALPAQWPGTEMLRQKQAACI
CCCHHCCCCCCCCCCCCCCCHHHHHHHHHCCEECCCCCCEECCCCCCCHHHHHHHHHHHH
STLSYDPAPDEGLVELDPQDQGAAVLEDGLYVLAGTLAAPEAEERLAGFLRASMRGWREA
HHCCCCCCCCCCEEEECCCCCCCHHHHCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHH
VAQPEDSARLILGPDPDPGALQRQAGMLRRIGGLLAADGALDEAGYRRTVETLRTGGPRS
HCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHH
VLRREPRGAFTHAISDRATLPEDAAATATADPTTTGPDVAPLR
HHHCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKWMTKSLIPAAVLLMLGSLAARAEQLTVQLRGPALAESAGFLIAKARGYYAEEGLAVRL
CCCHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCHHCCCCEEEEECCCCCCCCCCEEEE
RPADPAAPPFEALARGEADLAVEWMPTALVARENGLPVVNIAQIFARPALRLTCRREAGM
ECCCCCCCCHHHHHCCCCCEEEEECCCEEEECCCCCCEEHHHHHHHCCHHEEEEHHHCCC
AGAADLRGKTVGSWFGGTEYPLLAWLNRLGLVADDSLSGVALPAQWPGTEMLRQKQAACI
CCCHHCCCCCCCCCCCCCCCHHHHHHHHHCCEECCCCCCEECCCCCCCHHHHHHHHHHHH
STLSYDPAPDEGLVELDPQDQGAAVLEDGLYVLAGTLAAPEAEERLAGFLRASMRGWREA
HHCCCCCCCCCCEEEECCCCCCCHHHHCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHH
VAQPEDSARLILGPDPDPGALQRQAGMLRRIGGLLAADGALDEAGYRRTVETLRTGGPRS
HCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHH
VLRREPRGAFTHAISDRATLPEDAAATATADPTTTGPDVAPLR
HHHCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA