| Definition | Paracoccus denitrificans PD1222 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_008687 |
| Length | 1,730,097 |
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The map label for this gene is 119386733
Identifier: 119386733
GI number: 119386733
Start: 1174385
End: 1175020
Strand: Direct
Name: 119386733
Synonym: Pden_4026
Alternate gene names: NA
Gene position: 1174385-1175020 (Clockwise)
Preceding gene: 119386732
Following gene: 119386736
Centisome position: 67.88
GC content: 61.16
Gene sequence:
>636_bases ATGGAAGGCCGGGGAAATATTTATCAGAGCGTGATTTTTGCCGCCCAGAAGCATCTGGAGGAGACTGGGCGGCTTCCCTC TGACCCGGGCGAACTTGCCCGATACGTCGAGGCGAACGAGGATGAGATCAGCAGCATGTTCAGCTCGACCGAAGAGCTGC ATGAGGGCTTGGTCTATCACGCCGTCACGCTGCTGAACGATGCGCTGCGCCAGGGCGTGATCGCCGCCAATACCAGCGAC CCGATCGAGCAGATGCATTCGATCGCGCACAGCTATCTGGACTGGGCTGAAAGCAACCCGACGCTGTTCCGGTTTCTGGT CGACGGGCTGAACGGCCCGATCCGGCCCGGCGGCACGCTGCACCGCTATGCCAGTTCGATGCGCGACCTCTATCACCGCA AGCTGACCGAGGCGCAGCGGCTCGGCATCCTGTCCGAAGATACCGATATCGACATCTCGACCATGATGCTGCATTGCCTG GTCAAGGGCGGAAACATGATGTTCCTGACCCGCAGCACCGACCCGTGGTTCGACGGCGATACCCGCTCGACCCGCGAACT CGCCGAACGGATCTTCGCCAAGTTCATGGACAACCTGGTCCGGGCCAATACGCCCACGGCCAAGGAAAAGGCCTGA
Upstream 100 bases:
>100_bases CGCAGCGAAGGCTGAACTAATTTCAACGCCGATGGATTGCAGACTTTCGCATTGGCGAAACTCTGCTAGGCTTGGGACGA ATTGGCTTTGGGAGCGGCTG
Downstream 100 bases:
>100_bases GCGCCGCCCCGCTCAGATCTGGCGTTCGGGCAGGTTCACCACCAGCCCGTCGAGTTCCGGCGTCACCTTGATCTGGCAGG TCAGCCGCGAGCGCACCGGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 211; Mature: 211
Protein sequence:
>211_residues MEGRGNIYQSVIFAAQKHLEETGRLPSDPGELARYVEANEDEISSMFSSTEELHEGLVYHAVTLLNDALRQGVIAANTSD PIEQMHSIAHSYLDWAESNPTLFRFLVDGLNGPIRPGGTLHRYASSMRDLYHRKLTEAQRLGILSEDTDIDISTMMLHCL VKGGNMMFLTRSTDPWFDGDTRSTRELAERIFAKFMDNLVRANTPTAKEKA
Sequences:
>Translated_211_residues MEGRGNIYQSVIFAAQKHLEETGRLPSDPGELARYVEANEDEISSMFSSTEELHEGLVYHAVTLLNDALRQGVIAANTSD PIEQMHSIAHSYLDWAESNPTLFRFLVDGLNGPIRPGGTLHRYASSMRDLYHRKLTEAQRLGILSEDTDIDISTMMLHCL VKGGNMMFLTRSTDPWFDGDTRSTRELAERIFAKFMDNLVRANTPTAKEKA >Mature_211_residues MEGRGNIYQSVIFAAQKHLEETGRLPSDPGELARYVEANEDEISSMFSSTEELHEGLVYHAVTLLNDALRQGVIAANTSD PIEQMHSIAHSYLDWAESNPTLFRFLVDGLNGPIRPGGTLHRYASSMRDLYHRKLTEAQRLGILSEDTDIDISTMMLHCL VKGGNMMFLTRSTDPWFDGDTRSTRELAERIFAKFMDNLVRANTPTAKEKA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23735; Mature: 23735
Theoretical pI: Translated: 5.12; Mature: 5.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEGRGNIYQSVIFAAQKHLEETGRLPSDPGELARYVEANEDEISSMFSSTEELHEGLVYH CCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH AVTLLNDALRQGVIAANTSDPIEQMHSIAHSYLDWAESNPTLFRFLVDGLNGPIRPGGTL HHHHHHHHHHCCEECCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCHHH HRYASSMRDLYHRKLTEAQRLGILSEDTDIDISTMMLHCLVKGGNMMFLTRSTDPWFDGD HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCC TRSTRELAERIFAKFMDNLVRANTPTAKEKA CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MEGRGNIYQSVIFAAQKHLEETGRLPSDPGELARYVEANEDEISSMFSSTEELHEGLVYH CCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH AVTLLNDALRQGVIAANTSDPIEQMHSIAHSYLDWAESNPTLFRFLVDGLNGPIRPGGTL HHHHHHHHHHCCEECCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCHHH HRYASSMRDLYHRKLTEAQRLGILSEDTDIDISTMMLHCLVKGGNMMFLTRSTDPWFDGD HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCC TRSTRELAERIFAKFMDNLVRANTPTAKEKA CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA