| Definition | Paracoccus denitrificans PD1222 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_008687 |
| Length | 1,730,097 |
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The map label for this gene is bcp [C]
Identifier: 119386729
GI number: 119386729
Start: 1170462
End: 1171013
Strand: Direct
Name: bcp [C]
Synonym: Pden_4022
Alternate gene names: 119386729
Gene position: 1170462-1171013 (Clockwise)
Preceding gene: 119386728
Following gene: 119386730
Centisome position: 67.65
GC content: 65.94
Gene sequence:
>552_bases ATGGCCGTTCGTCCTCCGGTTTGCGATTTCGGCGCCAAGGCGCCGGACTTCACATTGCCAGATCCCGATGGGCGCATGTT CTCGTTCAGCGACATCGCCGGGCCGAGCGGCACGCTGGTCATGTTCATCTGCAACCATTGCCCCTATGTGCAGGCCGTCA TCGACCGCATCCGGCGCGACGCCGCCGAATTGCAGGGGCTGGGCGTGGGCGTCGTGGCGATCTCGGCCAACGACGTCGCC GAATATCCGCAGGACGCGCCCGAACAGATGAAGCTCGAGGCCGAAAGGCACGGCTTCACCTTTCCCTATCTCTACGACGA AAGCCAGGATGCCGCGCGCGCCTATGGCGCCGAATGCACGCCGGATTTCTTCGGCTACAATGCCGCGGGCGAATTGCAGT ATCGCGGCCGGCTGGACGCCTCGGGCCGCAATCCGGCGCCGCCGGACGCCCGGCGCGAACTGTTCGAGGCCATGGCGCAG ATCGCCCAGACCGGGCAGGGTCCGCGCGAACAGGTGGCCTCGATGGGCTGCTCGATCAAATGGAAGGCGTGA
Upstream 100 bases:
>100_bases CTTTCCTCTGTCCCACAGCATAGTCTGCGAAACGAATCCACCGCAATTTCCGCAGCCACCACCCGCAAGACCAAGCGGCA ATCACGAGCAAGGAGATTTC
Downstream 100 bases:
>100_bases ATGAACATCTGCTTTGCCCCCTGCCCCGTGGTTTTCGATCTTGACGGCACGCTGATCGACAGCGTGCCCGACATCCATGC CTGCGTGAACGCGGTCTTGC
Product: redoxin domain-containing protein
Products: Acceptor; H2O; oxidized thioredoxin [C]
Alternate protein names: Redoxin Domain Protein; Thioredoxin Family Protein; Redoxin; Redoxin Superfamily; Thiol-Disulfide Isomerase/Thioredoxin; Thioredoxin; Peroxiredoxin; Thiol-Disulfide Isomerase Or Thioredoxin; Antioxidant AhpC/TSA Family; Alkyl Hydroperoxide Reductase; Thiol-Disulfide Isomerase; Thioredoxin Domain-Containing Protein; Anti-Oxidant AhpCTSA Family Protein; Thiol-Disulfide Isomerase Thioredoxin Family; Peroxiredoxin-Like Protein; Thiol-Disulfide Isomerase And Thioredoxin; AhpC/TSA Family Protein; Thiol-Disulfide Isomerase-Like Protein; Thiol-Disulfide Isomerase And Thioredoxins
Number of amino acids: Translated: 183; Mature: 182
Protein sequence:
>183_residues MAVRPPVCDFGAKAPDFTLPDPDGRMFSFSDIAGPSGTLVMFICNHCPYVQAVIDRIRRDAAELQGLGVGVVAISANDVA EYPQDAPEQMKLEAERHGFTFPYLYDESQDAARAYGAECTPDFFGYNAAGELQYRGRLDASGRNPAPPDARRELFEAMAQ IAQTGQGPREQVASMGCSIKWKA
Sequences:
>Translated_183_residues MAVRPPVCDFGAKAPDFTLPDPDGRMFSFSDIAGPSGTLVMFICNHCPYVQAVIDRIRRDAAELQGLGVGVVAISANDVA EYPQDAPEQMKLEAERHGFTFPYLYDESQDAARAYGAECTPDFFGYNAAGELQYRGRLDASGRNPAPPDARRELFEAMAQ IAQTGQGPREQVASMGCSIKWKA >Mature_182_residues AVRPPVCDFGAKAPDFTLPDPDGRMFSFSDIAGPSGTLVMFICNHCPYVQAVIDRIRRDAAELQGLGVGVVAISANDVAE YPQDAPEQMKLEAERHGFTFPYLYDESQDAARAYGAECTPDFFGYNAAGELQYRGRLDASGRNPAPPDARRELFEAMAQI AQTGQGPREQVASMGCSIKWKA
Specific function: Unknown
COG id: COG0526
COG function: function code OC; Thiol-disulfide isomerase and thioredoxins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 920 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19930; Mature: 19798
Theoretical pI: Translated: 4.50; Mature: 4.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVRPPVCDFGAKAPDFTLPDPDGRMFSFSDIAGPSGTLVMFICNHCPYVQAVIDRIRRD CCCCCCCCCCCCCCCCCCCCCCCCCEEEHHCCCCCCCCEEEEECCCCCHHHHHHHHHHHH AAELQGLGVGVVAISANDVAEYPQDAPEQMKLEAERHGFTFPYLYDESQDAARAYGAECT HHHHHCCCEEEEEEECCCHHHCCCCCHHHHHHHHHHCCCCCCEEECCCCHHHHHCCCCCC PDFFGYNAAGELQYRGRLDASGRNPAPPDARRELFEAMAQIAQTGQGPREQVASMGCSIK HHHCCCCCCCCEEECCEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCEE WKA ECC >Mature Secondary Structure AVRPPVCDFGAKAPDFTLPDPDGRMFSFSDIAGPSGTLVMFICNHCPYVQAVIDRIRRD CCCCCCCCCCCCCCCCCCCCCCCCEEEHHCCCCCCCCEEEEECCCCCHHHHHHHHHHHH AAELQGLGVGVVAISANDVAEYPQDAPEQMKLEAERHGFTFPYLYDESQDAARAYGAECT HHHHHCCCEEEEEEECCCHHHCCCCCHHHHHHHHHHCCCCCCEEECCCCHHHHHCCCCCC PDFFGYNAAGELQYRGRLDASGRNPAPPDARRELFEAMAQIAQTGQGPREQVASMGCSIK HHHCCCCCCCCEEECCEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCEE WKA ECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: reduced acceptor; H2O2; reduced thioredoxin [C]
Specific reaction: reduced acceptor + H2O2 = Acceptor + H2O reduced thioredoxin + H2O2 = oxidized thioredoxin + H2O [C]
General reaction: Oxidoreductases; Acting on a peroxide as acceptor; Peroxidase [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA