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The map label for this gene is cbbZ [H]

Identifier: 119386730

GI number: 119386730

Start: 1171014

End: 1171697

Strand: Direct

Name: cbbZ [H]

Synonym: Pden_4023

Alternate gene names: 119386730

Gene position: 1171014-1171697 (Clockwise)

Preceding gene: 119386729

Following gene: 119386731

Centisome position: 67.68

GC content: 67.69

Gene sequence:

>684_bases
ATGAACATCTGCTTTGCCCCCTGCCCCGTGGTTTTCGATCTTGACGGCACGCTGATCGACAGCGTGCCCGACATCCATGC
CTGCGTGAACGCGGTCTTGCGCCTGCACGGCGTGGCTCCGCTGACGCTCGATCAGGTGCGCGGCTTCGTCGGCGGCGGCG
TCGATCTGCTGTGGCGGCGGGTGATCGGCACGACCGGGCTGCCGGCCGAGGCGCATCGCGACCTGGTCGCCTCGTTCATG
ACCCGCTATCACGACGCCACCGGCCTGACCCGGCTTTATCCCAATGTCACCGAGGCGTTGGGGATACTGGCCGACCGCGG
CTATCCGCTGGGGCTCTGCACCAACAAGCCGCTGGGGCCGACGCGGGCGATCCTGGACCATTTCGGCATCGCGCACCTGT
TCGGCATGGTGATCGGCGGCGATTCCCTGCCCCAGCGCAAGCCCGATCCGGCGCCGCTGCGCGCGGCCTTCGCCGGGCTG
GGCGCCGATCCCCTGAAGCCGCGCGGGGTCTATGTCGGCGACAGCGAATTCGACGAGGAATGCGCCAGCAATACCGGCGT
GCCCTTCCTGCTGTTCACCCACGGCTATCGCAAGACTCCGGTCGAGCAGATGGCGCATCATGGCACGTTCGACGATTTCG
CCCACCTGCCCCTGCTGGTCGAGGAGACTTCGGCCGTCGGCTAG

Upstream 100 bases:

>100_bases
GCGCGAACTGTTCGAGGCCATGGCGCAGATCGCCCAGACCGGGCAGGGTCCGCGCGAACAGGTGGCCTCGATGGGCTGCT
CGATCAAATGGAAGGCGTGA

Downstream 100 bases:

>100_bases
CTCCGTCCGGGCGCGGCAACGCTTGACAGCCAGGCGAAACGGAACGATCCGTCGCCCCATGCCGCCATCCCGGCGCGACC
CGAAGTCCAAGGAGTTCCGC

Product: phosphoglycolate phosphatase

Products: NA

Alternate protein names: PGP; PGPase [H]

Number of amino acids: Translated: 227; Mature: 227

Protein sequence:

>227_residues
MNICFAPCPVVFDLDGTLIDSVPDIHACVNAVLRLHGVAPLTLDQVRGFVGGGVDLLWRRVIGTTGLPAEAHRDLVASFM
TRYHDATGLTRLYPNVTEALGILADRGYPLGLCTNKPLGPTRAILDHFGIAHLFGMVIGGDSLPQRKPDPAPLRAAFAGL
GADPLKPRGVYVGDSEFDEECASNTGVPFLLFTHGYRKTPVEQMAHHGTFDDFAHLPLLVEETSAVG

Sequences:

>Translated_227_residues
MNICFAPCPVVFDLDGTLIDSVPDIHACVNAVLRLHGVAPLTLDQVRGFVGGGVDLLWRRVIGTTGLPAEAHRDLVASFM
TRYHDATGLTRLYPNVTEALGILADRGYPLGLCTNKPLGPTRAILDHFGIAHLFGMVIGGDSLPQRKPDPAPLRAAFAGL
GADPLKPRGVYVGDSEFDEECASNTGVPFLLFTHGYRKTPVEQMAHHGTFDDFAHLPLLVEETSAVG
>Mature_227_residues
MNICFAPCPVVFDLDGTLIDSVPDIHACVNAVLRLHGVAPLTLDQVRGFVGGGVDLLWRRVIGTTGLPAEAHRDLVASFM
TRYHDATGLTRLYPNVTEALGILADRGYPLGLCTNKPLGPTRAILDHFGIAHLFGMVIGGDSLPQRKPDPAPLRAAFAGL
GADPLKPRGVYVGDSEFDEECASNTGVPFLLFTHGYRKTPVEQMAHHGTFDDFAHLPLLVEETSAVG

Specific function: Specifically catalyzes the dephosphorylation of 2- phosphoglycolate. Is involved in the dissimilation of the intracellular 2-phosphoglycolate formed during the DNA repair of 3'-phosphoglycolate ends, a major class of DNA lesions induced by oxidative stres

COG id: COG0546

COG function: function code R; Predicted phosphatases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family [H]

Homologues:

Organism=Escherichia coli, GI1789787, Length=208, Percent_Identity=34.1346153846154, Blast_Score=102, Evalue=3e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005834
- InterPro:   IPR023214
- InterPro:   IPR006439
- InterPro:   IPR006402
- InterPro:   IPR005833
- InterPro:   IPR006346
- InterPro:   IPR023198 [H]

Pfam domain/function: PF00702 Hydrolase [H]

EC number: =3.1.3.18 [H]

Molecular weight: Translated: 24349; Mature: 24349

Theoretical pI: Translated: 5.96; Mature: 5.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNICFAPCPVVFDLDGTLIDSVPDIHACVNAVLRLHGVAPLTLDQVRGFVGGGVDLLWRR
CCCCCCCCCEEEECCCHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHH
VIGTTGLPAEAHRDLVASFMTRYHDATGLTRLYPNVTEALGILADRGYPLGLCTNKPLGP
HHCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHCCCCCEEECCCCCCCH
TRAILDHFGIAHLFGMVIGGDSLPQRKPDPAPLRAAFAGLGADPLKPRGVYVGDSEFDEE
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCEEECCCHHHHH
CASNTGVPFLLFTHGYRKTPVEQMAHHGTFDDFAHLPLLVEETSAVG
HHCCCCCCEEEEECCCCCCCHHHHHHCCCHHHHHHCCEEECCCCCCC
>Mature Secondary Structure
MNICFAPCPVVFDLDGTLIDSVPDIHACVNAVLRLHGVAPLTLDQVRGFVGGGVDLLWRR
CCCCCCCCCEEEECCCHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHH
VIGTTGLPAEAHRDLVASFMTRYHDATGLTRLYPNVTEALGILADRGYPLGLCTNKPLGP
HHCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHCCCCCEEECCCCCCCH
TRAILDHFGIAHLFGMVIGGDSLPQRKPDPAPLRAAFAGLGADPLKPRGVYVGDSEFDEE
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCEEECCCHHHHH
CASNTGVPFLLFTHGYRKTPVEQMAHHGTFDDFAHLPLLVEETSAVG
HHCCCCCCEEEEECCCCCCCHHHHHHCCCHHHHHHCCEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA