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The map label for this gene is amiC [H]

Identifier: 119386724

GI number: 119386724

Start: 1164011

End: 1165297

Strand: Direct

Name: amiC [H]

Synonym: Pden_4017

Alternate gene names: 119386724

Gene position: 1164011-1165297 (Clockwise)

Preceding gene: 119386723

Following gene: 119386725

Centisome position: 67.28

GC content: 64.18

Gene sequence:

>1287_bases
ATGAACAGGATTATCAGCGCAGCCGCCGCTCTGGCGATTTCGACCGGGCTTGCGGGCATCGCTTGGGCGCAGGAAGGCGA
GCCGATCAAGATCGGCGTGCTGCACTCGCTCTCGGGCACCATGGCGATTTCGGAAACCACGCTGAAGGACACCGTCCTGA
TGATGGTCGAGCGCCAGAACGCCAAGGGCGGGCTGCTGGGCCGCCCGCTGGAGGCCGTGGTGGTCGATCCGGCCTCGGAC
TGGCCGCTCTTCGCCGAAAAGGCGCGCGAACTGCTGACCGTCAGCGATGTGGACGTGATCTTCGGCGCGTGGACCTCGGT
TTCCCGCAAGTCCGTGCTGCCGGTCCTGGAGGAGCTGAACGGGCTGATGTTCTATCCCGTTCAATACGAAGGCGAGGAAA
GCTCGAAGAACGTCATCTATACCGGCGCCGCCCCGAACCAGCAGGCGATCCCGGCGGTCGATTACATGACGGAGGAACTG
GGCGTCGAGAAATGGGCGCTTCTGGGCACCGATTACGTCTATCCGCGCACCACGAACAACATCCTCGACGCCTATCTGAA
GGACAAGGGCGTCGCCGCAGGGGACATCTTCGTCAACTACACCCCCTTCGGGCATTCGGACTGGTCCAAGATCGTCGCGG
ACGTGGTGGCGCTTGGCGCGGACGGCAAGAAGGTCGGCGTCGTCTCGACCATCAACGGCGATGCCAATGTCGGCTTCTAC
AAGGAACTGGCGGCGGCGGGCGTCTCGGCCGAGGACATTCCGGTCATCGCCTTCTCGGTCGGCGAGGAAGAGCTTTCCGG
ACTGGATACCGCGAACCTCGTCGGGCATCTGGCCGCCTGGAACTATTTCCAATCCGCCGACACGCCCGAAAACGCCGCCT
TCATCGAGGAATGGCACAAGTTCATCGGCGACGACAAGCGCGTGACCAACGACCCGATGGAGGCGACGATGATCGGCTTC
AGCGCCTGGGTCGCGGCGGTCGAAAAGGCGGGCACCACCGATGTCGACCCGGTGCTTGACGCCATCGTGGGGATCGAGGT
GCCGAACCTGACCGGCGGCACCGCGACGGTTCTGCCGAACCACCACCTGACCAAGCCGGTGCTGATCGGCGAGATCCGCG
CCGACGGCCAGTTCGACATCGTCAGCCAGACCGAGCCGGTGCCGGGCGACGCCTGGACCGACTATCTGCCCGAATCCGCC
GTGCTGGACGCCGACTGGCCGGGCAAGCAATGCGGCATGTTCAACACGCAGACCAACAGCTGCGTGCAGGTCCAGTCGAA
CTACTGA

Upstream 100 bases:

>100_bases
TGCCGCCCCATGATGGTCGGGGGCGCAGGAATTGGCGGCGTGCCGCCGATGTCCTCTAGTTCCCCTGAACCCGACGGCAA
CGACACAAGGGAAGACAGGG

Downstream 100 bases:

>100_bases
CCGGCTTTCGGGGGCGGTGCAGCCGCCCTCTTTCGCCTCAAGACGGAAATGCCCATGACCTGCCGCCTGATCGCCTTGCT
GCTGAACCTGTTCCTGGCCT

Product: ABC branched chain amino acid transporter, substrate binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 428; Mature: 428

Protein sequence:

>428_residues
MNRIISAAAALAISTGLAGIAWAQEGEPIKIGVLHSLSGTMAISETTLKDTVLMMVERQNAKGGLLGRPLEAVVVDPASD
WPLFAEKARELLTVSDVDVIFGAWTSVSRKSVLPVLEELNGLMFYPVQYEGEESSKNVIYTGAAPNQQAIPAVDYMTEEL
GVEKWALLGTDYVYPRTTNNILDAYLKDKGVAAGDIFVNYTPFGHSDWSKIVADVVALGADGKKVGVVSTINGDANVGFY
KELAAAGVSAEDIPVIAFSVGEEELSGLDTANLVGHLAAWNYFQSADTPENAAFIEEWHKFIGDDKRVTNDPMEATMIGF
SAWVAAVEKAGTTDVDPVLDAIVGIEVPNLTGGTATVLPNHHLTKPVLIGEIRADGQFDIVSQTEPVPGDAWTDYLPESA
VLDADWPGKQCGMFNTQTNSCVQVQSNY

Sequences:

>Translated_428_residues
MNRIISAAAALAISTGLAGIAWAQEGEPIKIGVLHSLSGTMAISETTLKDTVLMMVERQNAKGGLLGRPLEAVVVDPASD
WPLFAEKARELLTVSDVDVIFGAWTSVSRKSVLPVLEELNGLMFYPVQYEGEESSKNVIYTGAAPNQQAIPAVDYMTEEL
GVEKWALLGTDYVYPRTTNNILDAYLKDKGVAAGDIFVNYTPFGHSDWSKIVADVVALGADGKKVGVVSTINGDANVGFY
KELAAAGVSAEDIPVIAFSVGEEELSGLDTANLVGHLAAWNYFQSADTPENAAFIEEWHKFIGDDKRVTNDPMEATMIGF
SAWVAAVEKAGTTDVDPVLDAIVGIEVPNLTGGTATVLPNHHLTKPVLIGEIRADGQFDIVSQTEPVPGDAWTDYLPESA
VLDADWPGKQCGMFNTQTNSCVQVQSNY
>Mature_428_residues
MNRIISAAAALAISTGLAGIAWAQEGEPIKIGVLHSLSGTMAISETTLKDTVLMMVERQNAKGGLLGRPLEAVVVDPASD
WPLFAEKARELLTVSDVDVIFGAWTSVSRKSVLPVLEELNGLMFYPVQYEGEESSKNVIYTGAAPNQQAIPAVDYMTEEL
GVEKWALLGTDYVYPRTTNNILDAYLKDKGVAAGDIFVNYTPFGHSDWSKIVADVVALGADGKKVGVVSTINGDANVGFY
KELAAAGVSAEDIPVIAFSVGEEELSGLDTANLVGHLAAWNYFQSADTPENAAFIEEWHKFIGDDKRVTNDPMEATMIGF
SAWVAAVEKAGTTDVDPVLDAIVGIEVPNLTGGTATVLPNHHLTKPVLIGEIRADGQFDIVSQTEPVPGDAWTDYLPESA
VLDADWPGKQCGMFNTQTNSCVQVQSNY

Specific function: Negatively regulates the expression of the aliphatic amidase operon. AmiC functions by inhibiting the action of AmiR at the protein level. It exhibits protein kinase activity [H]

COG id: COG0683

COG function: function code E; ABC-type branched-chain amino acid transport systems, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000709 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45785; Mature: 45785

Theoretical pI: Translated: 4.10; Mature: 4.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRIISAAAALAISTGLAGIAWAQEGEPIKIGVLHSLSGTMAISETTLKDTVLMMVERQN
CCHHHHHHHHHHHHCCCCEEEECCCCCCEEEEEEECCCCCEEEEHHHHHHEEEEEEECCC
AKGGLLGRPLEAVVVDPASDWPLFAEKARELLTVSDVDVIFGAWTSVSRKSVLPVLEELN
CCCCCCCCCCEEEEECCCCCCCHHHHHHHHHEEECCHHHEEECHHHCCHHHHHHHHHHCC
GLMFYPVQYEGEESSKNVIYTGAAPNQQAIPAVDYMTEELGVEKWALLGTDYVYPRTTNN
CEEEEEEEECCCCCCCCEEEECCCCCCCCCCHHHHHHHHHCCCEEEEECCCEECCCCCHH
ILDAYLKDKGVAAGDIFVNYTPFGHSDWSKIVADVVALGADGKKVGVVSTINGDANVGFY
HHHHHHHCCCCEECEEEEEECCCCCCHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCHH
KELAAAGVSAEDIPVIAFSVGEEELSGLDTANLVGHLAAWNYFQSADTPENAAFIEEWHK
HHHHHCCCCCCCCCEEEEECCHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
FIGDDKRVTNDPMEATMIGFSAWVAAVEKAGTTDVDPVLDAIVGIEVPNLTGGTATVLPN
HHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCEEEECCC
HHLTKPVLIGEIRADGQFDIVSQTEPVPGDAWTDYLPESAVLDADWPGKQCGMFNTQTNS
CCCCCCEEEEEEECCCCEEEECCCCCCCCCHHHHHCCCCCEECCCCCCCCCCCCCCCCCC
CVQVQSNY
EEEEECCC
>Mature Secondary Structure
MNRIISAAAALAISTGLAGIAWAQEGEPIKIGVLHSLSGTMAISETTLKDTVLMMVERQN
CCHHHHHHHHHHHHCCCCEEEECCCCCCEEEEEEECCCCCEEEEHHHHHHEEEEEEECCC
AKGGLLGRPLEAVVVDPASDWPLFAEKARELLTVSDVDVIFGAWTSVSRKSVLPVLEELN
CCCCCCCCCCEEEEECCCCCCCHHHHHHHHHEEECCHHHEEECHHHCCHHHHHHHHHHCC
GLMFYPVQYEGEESSKNVIYTGAAPNQQAIPAVDYMTEELGVEKWALLGTDYVYPRTTNN
CEEEEEEEECCCCCCCCEEEECCCCCCCCCCHHHHHHHHHCCCEEEEECCCEECCCCCHH
ILDAYLKDKGVAAGDIFVNYTPFGHSDWSKIVADVVALGADGKKVGVVSTINGDANVGFY
HHHHHHHCCCCEECEEEEEECCCCCCHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCHH
KELAAAGVSAEDIPVIAFSVGEEELSGLDTANLVGHLAAWNYFQSADTPENAAFIEEWHK
HHHHHCCCCCCCCCEEEEECCHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
FIGDDKRVTNDPMEATMIGFSAWVAAVEKAGTTDVDPVLDAIVGIEVPNLTGGTATVLPN
HHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCEEEECCC
HHLTKPVLIGEIRADGQFDIVSQTEPVPGDAWTDYLPESAVLDADWPGKQCGMFNTQTNS
CCCCCCEEEEEEECCCCEEEECCCCCCCCCHHHHHCCCCCEECCCCCCCCCCCCCCCCCC
CVQVQSNY
EEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1907262; 10984043; 1762155; 7813419; 10508151; 10708652 [H]