| Definition | Paracoccus denitrificans PD1222 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_008687 |
| Length | 1,730,097 |
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The map label for this gene is oxlT [H]
Identifier: 119386713
GI number: 119386713
Start: 1147245
End: 1148897
Strand: Direct
Name: oxlT [H]
Synonym: Pden_4006
Alternate gene names: 119386713
Gene position: 1147245-1148897 (Clockwise)
Preceding gene: 119386710
Following gene: 119386716
Centisome position: 66.31
GC content: 65.58
Gene sequence:
>1653_bases ATGACGGCCATAGAAGACGTTCCAGAATTCCGGACACCGTTGCTGTCTCGCGAACGCACGATAGCCCGGCCGGGCTTCAA CCGATGGCTGGTGCCGCCTGCCGCCCTGGCGATTCACCTGTGCATCGGCATGGCCTATGGCTTCTCGGTGTTCTGGCTGC CGCTGTCGCGCGCCATCGGGATCGCCGATCCGGTCGCCTGCGAGGGGATGAGCCTGCTTTCGGCCCTGTTCACGACCAGC TGCGACTGGCGCATCGCCGATCTGGGCTGGATCTATACGCTGTTCTTCGTGCTGCTGGGATCCTCGGCCGCGATGTGGGG AGGCTGGCTGGAGGTCGCAGGACCACGCAAGGCAGGCGTCGTCGCCGCCTTGTGCTGGTGCGGTGGCATGGTCGTCTCGG GGATCGGGGTGATGACCCATCAATTGTGGCTGATGTGGATCGGCTCCGGGTTCATCGGGGGCGTCGGACTGGGCCTTGGC TACATCTCGCCCGTCTCGACCCTGATCAAGTGGTTCCCCGACCGGCGCGGCCTGGCGACGGGCATGGCGATCATGGGCTT TGGCGGCGGCGCGATGATCGGAGCCCCGCTGGCGGATCGGCTGATGAACCACTTCCAGTCGATGAGCGGCGTCGGCGTCT GGCAGACCTTCTTCGTCATGGCCGCGATCTATTTCGTCTTCATGATGGCCGGCGCCTTCGGCTATCGCGTTCCGCCGGCC GGCTGGAAGCCCGAAGGCTGGCAGCCCAAGGTTTCCGCCAGGCAGGCCGCGATGATCACCCAGCATCACGTCCATCTGCG GGATGCGCACAAGACCCGGCAGTTCTGGCTGATCTGGCTGGTGCTTTGCCTGAACGTCTCGGCCGGGATCGGGGTGATCG GCATGGCGTCGCCCATGCTGCAGGAGATCTTTGCCGGCCGGCTGGTCGGACGGCCGGAGTTGAGCTTTACCGAGCTGGAC CCCAGCCAGAAGGCAGCCATCGCGGCCATTGCAGCCGGCTTCGCGGGGCTTTTGTCGCTGTTCAACATCGCGGGACGGCT GTGCTGGGCGTCGGCCTCGGACCGGCTGGGGCGCAAGACCACCTATTTCATCTTTTTCGGCCTGGGGATCGTGCTTTACA CCCTGGCGCCCAGTGCGGCGCATACGGGCAACCAGGTTCTGTTCGTGGCGATGATCTGCGTCATCATCTCGATGTATGGC GGTGGATTCTCGACCGTGCCGGCCTATCTGGCGGATGTCTTCGGCACGCAGTTCGTGGGCGCGATCCATGGCAGGCTGCT GACCGCATGGGCGACGGCGGGGATCGTCGGCCCGGTCGTGGTCAACTATCTGCGCGAGGCGCAGATCGCGGCGGGCGTGC CACGGGCGCAGGCATACGACTACACGATGTACATCCTTGCGGGCTTTCTTGCCGTCGGCCTGATCTGCAATGCCCTGGTG CGGCCGCTGGATGAGAAATGGTTCATGAAGCCCGAGCAGGTCGCGGCCTTGCGGGCCAGCGATGCGACGGCGGGGCAGGT CCAGAGCGGTTCGTTCGGCATCGACCGCGGCCGGTTCGACTTGCCGGCGATGCTGGCCTGGGCTGCGGTCGGCATCCCGC TGGCATGGGGCGTGTGGACGACGGTGATGAAGACGGCGGCATTGTTCGGGTAA
Upstream 100 bases:
>100_bases TCGTCCGACAAGCGTCCATGTCCGGCAAAGGGCAGGGCGGCGCGGATTTCGCGACCAGCTTTGCAGGTCGCGTGCGCATC CATTTCAGGGGAGGGGAATG
Downstream 100 bases:
>100_bases GGTGGCGATCCCCCATCGGCGGCCATGTCGGATGCGTGGCCGCACGAGCTTCTGCCCGTCATGCGGCCGGAAGCCAGATG CGGAAGGTGCTACCCCCGTT
Product: major facilitator transporter
Products: NA
Alternate protein names: OFA; Oxalate:formate antiport protein; Oxalate:formate exchange protein [H]
Number of amino acids: Translated: 550; Mature: 549
Protein sequence:
>550_residues MTAIEDVPEFRTPLLSRERTIARPGFNRWLVPPAALAIHLCIGMAYGFSVFWLPLSRAIGIADPVACEGMSLLSALFTTS CDWRIADLGWIYTLFFVLLGSSAAMWGGWLEVAGPRKAGVVAALCWCGGMVVSGIGVMTHQLWLMWIGSGFIGGVGLGLG YISPVSTLIKWFPDRRGLATGMAIMGFGGGAMIGAPLADRLMNHFQSMSGVGVWQTFFVMAAIYFVFMMAGAFGYRVPPA GWKPEGWQPKVSARQAAMITQHHVHLRDAHKTRQFWLIWLVLCLNVSAGIGVIGMASPMLQEIFAGRLVGRPELSFTELD PSQKAAIAAIAAGFAGLLSLFNIAGRLCWASASDRLGRKTTYFIFFGLGIVLYTLAPSAAHTGNQVLFVAMICVIISMYG GGFSTVPAYLADVFGTQFVGAIHGRLLTAWATAGIVGPVVVNYLREAQIAAGVPRAQAYDYTMYILAGFLAVGLICNALV RPLDEKWFMKPEQVAALRASDATAGQVQSGSFGIDRGRFDLPAMLAWAAVGIPLAWGVWTTVMKTAALFG
Sequences:
>Translated_550_residues MTAIEDVPEFRTPLLSRERTIARPGFNRWLVPPAALAIHLCIGMAYGFSVFWLPLSRAIGIADPVACEGMSLLSALFTTS CDWRIADLGWIYTLFFVLLGSSAAMWGGWLEVAGPRKAGVVAALCWCGGMVVSGIGVMTHQLWLMWIGSGFIGGVGLGLG YISPVSTLIKWFPDRRGLATGMAIMGFGGGAMIGAPLADRLMNHFQSMSGVGVWQTFFVMAAIYFVFMMAGAFGYRVPPA GWKPEGWQPKVSARQAAMITQHHVHLRDAHKTRQFWLIWLVLCLNVSAGIGVIGMASPMLQEIFAGRLVGRPELSFTELD PSQKAAIAAIAAGFAGLLSLFNIAGRLCWASASDRLGRKTTYFIFFGLGIVLYTLAPSAAHTGNQVLFVAMICVIISMYG GGFSTVPAYLADVFGTQFVGAIHGRLLTAWATAGIVGPVVVNYLREAQIAAGVPRAQAYDYTMYILAGFLAVGLICNALV RPLDEKWFMKPEQVAALRASDATAGQVQSGSFGIDRGRFDLPAMLAWAAVGIPLAWGVWTTVMKTAALFG >Mature_549_residues TAIEDVPEFRTPLLSRERTIARPGFNRWLVPPAALAIHLCIGMAYGFSVFWLPLSRAIGIADPVACEGMSLLSALFTTSC DWRIADLGWIYTLFFVLLGSSAAMWGGWLEVAGPRKAGVVAALCWCGGMVVSGIGVMTHQLWLMWIGSGFIGGVGLGLGY ISPVSTLIKWFPDRRGLATGMAIMGFGGGAMIGAPLADRLMNHFQSMSGVGVWQTFFVMAAIYFVFMMAGAFGYRVPPAG WKPEGWQPKVSARQAAMITQHHVHLRDAHKTRQFWLIWLVLCLNVSAGIGVIGMASPMLQEIFAGRLVGRPELSFTELDP SQKAAIAAIAAGFAGLLSLFNIAGRLCWASASDRLGRKTTYFIFFGLGIVLYTLAPSAAHTGNQVLFVAMICVIISMYGG GFSTVPAYLADVFGTQFVGAIHGRLLTAWATAGIVGPVVVNYLREAQIAAGVPRAQAYDYTMYILAGFLAVGLICNALVR PLDEKWFMKPEQVAALRASDATAGQVQSGSFGIDRGRFDLPAMLAWAAVGIPLAWGVWTTVMKTAALFG
Specific function: Anion transporter that carries out the exchange of divalent oxalate with monovalent formate, the product of oxalate decarboxylation, at the plasma membrane, and in doing so catalyzes the vectorial portion of a proton-motive metabolic cycle that drives ATP
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. OFA (TC 2.A.1.11) family [H]
Homologues:
Organism=Escherichia coli, GI1789969, Length=370, Percent_Identity=22.1621621621622, Blast_Score=85, Evalue=1e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR004741 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 59075; Mature: 58944
Theoretical pI: Translated: 9.20; Mature: 9.20
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAIEDVPEFRTPLLSRERTIARPGFNRWLVPPAALAIHLCIGMAYGFSVFWLPLSRAIG CCCCCCCHHHHHHHHHCCCHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC IADPVACEGMSLLSALFTTSCDWRIADLGWIYTLFFVLLGSSAAMWGGWLEVAGPRKAGV CCCCHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHCCCHHHCCCHHEECCCCHHHH VAALCWCGGMVVSGIGVMTHQLWLMWIGSGFIGGVGLGLGYISPVSTLIKWFPDRRGLAT HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH GMAIMGFGGGAMIGAPLADRLMNHFQSMSGVGVWQTFFVMAAIYFVFMMAGAFGYRVPPA CHHHEECCCCHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCC GWKPEGWQPKVSARQAAMITQHHVHLRDAHKTRQFWLIWLVLCLNVSAGIGVIGMASPML CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCHHHH QEIFAGRLVGRPELSFTELDPSQKAAIAAIAAGFAGLLSLFNIAGRLCWASASDRLGRKT HHHHHHHCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCH TYFIFFGLGIVLYTLAPSAAHTGNQVLFVAMICVIISMYGGGFSTVPAYLADVFGTQFVG HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH AIHGRLLTAWATAGIVGPVVVNYLREAQIAAGVPRAQAYDYTMYILAGFLAVGLICNALV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH RPLDEKWFMKPEQVAALRASDATAGQVQSGSFGIDRGRFDLPAMLAWAAVGIPLAWGVWT CCCCHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHH TVMKTAALFG HHHHHHHHCC >Mature Secondary Structure TAIEDVPEFRTPLLSRERTIARPGFNRWLVPPAALAIHLCIGMAYGFSVFWLPLSRAIG CCCCCCHHHHHHHHHCCCHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC IADPVACEGMSLLSALFTTSCDWRIADLGWIYTLFFVLLGSSAAMWGGWLEVAGPRKAGV CCCCHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHCCCHHHCCCHHEECCCCHHHH VAALCWCGGMVVSGIGVMTHQLWLMWIGSGFIGGVGLGLGYISPVSTLIKWFPDRRGLAT HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH GMAIMGFGGGAMIGAPLADRLMNHFQSMSGVGVWQTFFVMAAIYFVFMMAGAFGYRVPPA CHHHEECCCCHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCC GWKPEGWQPKVSARQAAMITQHHVHLRDAHKTRQFWLIWLVLCLNVSAGIGVIGMASPML CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCHHHH QEIFAGRLVGRPELSFTELDPSQKAAIAAIAAGFAGLLSLFNIAGRLCWASASDRLGRKT HHHHHHHCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCH TYFIFFGLGIVLYTLAPSAAHTGNQVLFVAMICVIISMYGGGFSTVPAYLADVFGTQFVG HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH AIHGRLLTAWATAGIVGPVVVNYLREAQIAAGVPRAQAYDYTMYILAGFLAVGLICNALV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH RPLDEKWFMKPEQVAALRASDATAGQVQSGSFGIDRGRFDLPAMLAWAAVGIPLAWGVWT CCCCHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHH TVMKTAALFG HHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8636101; 9651403; 11919184; 11113128; 11274108; 11500368 [H]