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The map label for this gene is sufB [C]

Identifier: 119386671

GI number: 119386671

Start: 1102409

End: 1103935

Strand: Direct

Name: sufB [C]

Synonym: Pden_3964

Alternate gene names: 119386671

Gene position: 1102409-1103935 (Clockwise)

Preceding gene: 119386670

Following gene: 119386672

Centisome position: 63.72

GC content: 61.56

Gene sequence:

>1527_bases
ATGACTGTAGAGATCGGCGAGGCAATCGAAATCCGCGAGGGCGTAGACCGCGAGACCGTCGAGACCGTCCAGAACATGGG
GTCCTACAAATACGGCTGGGATACCGAGATCGAGATGGAATATGCCCCCAGGGGCATCAACGAGGATATCGTCCGGCTGA
TCTCGAAGAAGAACGAGGAACCGGAATGGATGACCGAGTGGCGGCTGCAGGCCTTTCGCCGCTGGCAGACCATGACCGAG
CCGAAATGGGCGATGCTGAACTATCCCGAGATCGACTATCAGGACCAGTATTACTACGCCCGCCCGAAAAGCATGCAGGT
CAAGCCCAAGTCGCTGGACGAGGTCGACCCCAAGCTGCTGGCCACCTATGAAAAGCTGGGCATCCCGCTGAAGGAGCAGA
TGATCCTGGCCGGGATCGAGGGCGCCGAGGGCGCACCGGCCGAAGGGCGCAAGGTCGCGGTCGATGCTGTCTTCGACAGC
GTCAGCGTCGGCACCACCTTCAAGGACGAACTGGCCAAGGCCGGGGTGATCTTCTGCTCGATCTCGGAAGCCATCCGCGA
ACATCCCGAACTGGTGAAGAAATACCTGGGCTCGGTCGTGCCGCAGTCGGACAATTTCTTCGCCACGCTGAACTCGGCGG
TCTTTTCGGACGGCAGCTTCGTCTATGTGCCGCCGGGGGTGCGCTGCCCGATGGAGCTTTCGACCTATTTCCGCATCAAT
GCCGAGAATACCGGCCAGTTCGAGCGCACGCTGATCATCGCCGACAAGGGCTCTTACGTCAGCTACCTGGAGGGCTGCAC
CGCGCCCAAGCGCGACGTGGCGCAGCTGCATGCCGCGGTGGTCGAGATCGTCGTGCTGGAGGATGCCGAGGTCAAGTATT
CGACCGTCCAGAACTGGTTCCCCGGCGACGAGGAAGGCAAGGGCGGCATCTACAACTTCGTCACCAAGCGCGCGGATTGC
CGCGAGGCACGGGCCAAGGTGATGTGGACCCAGGTCGAGACCGGCTCGGCCATCACCTGGAAATACCCGTCCTGCATCCT
GCGCGGCGACGAGTCGCAGGGCGAGTTCTATTCCATCGCCATCGCCAACAACCACCAGCAGGCCGACACCGGCACCAAGA
TGATCCACCTTGGCAAGAACACCCGCTCGCGCATTGTTTCCAAAGGGATTTCCGCCGGACAGGCGCAGAATACCTATCGC
GGCCTCGTGTCCATGCACCCGCGCGCCAAGAACAGCCGCAACTATACGCAATGCGACAGCCTGCTGATCGGCGACAAATG
CGGCGCCCATACCGTGCCCTATATCGAGGTGAAAAATACCTCGTCCTGTGTGGAGCATGAGGCGACAACCTCGAAAGTGG
ATGACGACCAGCTGTTCTATTGCCGCCAGCGCGGCATGGACGAGGAAGAGGCCGTCGCGCTGGTTGTGAACGGCTTCTGC
CGCGAGGTCCTGCAGGCCCTGCCGATGGAATTCGCCATGGAGGCGCAGTCGCTGGTCGCGATCAGCCTGGAGGGGTCGGT
CGGATGA

Upstream 100 bases:

>100_bases
GAGCCTGGAGACGTGATGCGTTTTGCGGATGCCTGGCTCGCGGCCCATGGCCGCTGGCGGCAAAGGAATGATGGGCGGGC
GACCGCGGGAAGGGTTTGAG

Downstream 100 bases:

>100_bases
TCGTCACCACCACCCCCGGCATCGAGGGTCGCCGCATCAGCGCCTATCACGGCGTGGTGACGGGCGAGACCATCATCGGG
GCCAACATCTTTCGCGATAT

Product: cysteine desulfurase activator complex subunit SufB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 508; Mature: 507

Protein sequence:

>508_residues
MTVEIGEAIEIREGVDRETVETVQNMGSYKYGWDTEIEMEYAPRGINEDIVRLISKKNEEPEWMTEWRLQAFRRWQTMTE
PKWAMLNYPEIDYQDQYYYARPKSMQVKPKSLDEVDPKLLATYEKLGIPLKEQMILAGIEGAEGAPAEGRKVAVDAVFDS
VSVGTTFKDELAKAGVIFCSISEAIREHPELVKKYLGSVVPQSDNFFATLNSAVFSDGSFVYVPPGVRCPMELSTYFRIN
AENTGQFERTLIIADKGSYVSYLEGCTAPKRDVAQLHAAVVEIVVLEDAEVKYSTVQNWFPGDEEGKGGIYNFVTKRADC
REARAKVMWTQVETGSAITWKYPSCILRGDESQGEFYSIAIANNHQQADTGTKMIHLGKNTRSRIVSKGISAGQAQNTYR
GLVSMHPRAKNSRNYTQCDSLLIGDKCGAHTVPYIEVKNTSSCVEHEATTSKVDDDQLFYCRQRGMDEEEAVALVVNGFC
REVLQALPMEFAMEAQSLVAISLEGSVG

Sequences:

>Translated_508_residues
MTVEIGEAIEIREGVDRETVETVQNMGSYKYGWDTEIEMEYAPRGINEDIVRLISKKNEEPEWMTEWRLQAFRRWQTMTE
PKWAMLNYPEIDYQDQYYYARPKSMQVKPKSLDEVDPKLLATYEKLGIPLKEQMILAGIEGAEGAPAEGRKVAVDAVFDS
VSVGTTFKDELAKAGVIFCSISEAIREHPELVKKYLGSVVPQSDNFFATLNSAVFSDGSFVYVPPGVRCPMELSTYFRIN
AENTGQFERTLIIADKGSYVSYLEGCTAPKRDVAQLHAAVVEIVVLEDAEVKYSTVQNWFPGDEEGKGGIYNFVTKRADC
REARAKVMWTQVETGSAITWKYPSCILRGDESQGEFYSIAIANNHQQADTGTKMIHLGKNTRSRIVSKGISAGQAQNTYR
GLVSMHPRAKNSRNYTQCDSLLIGDKCGAHTVPYIEVKNTSSCVEHEATTSKVDDDQLFYCRQRGMDEEEAVALVVNGFC
REVLQALPMEFAMEAQSLVAISLEGSVG
>Mature_507_residues
TVEIGEAIEIREGVDRETVETVQNMGSYKYGWDTEIEMEYAPRGINEDIVRLISKKNEEPEWMTEWRLQAFRRWQTMTEP
KWAMLNYPEIDYQDQYYYARPKSMQVKPKSLDEVDPKLLATYEKLGIPLKEQMILAGIEGAEGAPAEGRKVAVDAVFDSV
SVGTTFKDELAKAGVIFCSISEAIREHPELVKKYLGSVVPQSDNFFATLNSAVFSDGSFVYVPPGVRCPMELSTYFRINA
ENTGQFERTLIIADKGSYVSYLEGCTAPKRDVAQLHAAVVEIVVLEDAEVKYSTVQNWFPGDEEGKGGIYNFVTKRADCR
EARAKVMWTQVETGSAITWKYPSCILRGDESQGEFYSIAIANNHQQADTGTKMIHLGKNTRSRIVSKGISAGQAQNTYRG
LVSMHPRAKNSRNYTQCDSLLIGDKCGAHTVPYIEVKNTSSCVEHEATTSKVDDDQLFYCRQRGMDEEEAVALVVNGFCR
EVLQALPMEFAMEAQSLVAISLEGSVG

Specific function: Unknown

COG id: COG0719

COG function: function code O; ABC-type transport system involved in Fe-S cluster assembly, permease component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0051 (ycf24) family [H]

Homologues:

Organism=Escherichia coli, GI87081955, Length=493, Percent_Identity=59.2292089249493, Blast_Score=628, Evalue=0.0,
Organism=Escherichia coli, GI1787971, Length=153, Percent_Identity=26.797385620915, Blast_Score=69, Evalue=8e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010231
- InterPro:   IPR000825 [H]

Pfam domain/function: PF01458 UPF0051 [H]

EC number: NA

Molecular weight: Translated: 56880; Mature: 56749

Theoretical pI: Translated: 4.75; Mature: 4.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVEIGEAIEIREGVDRETVETVQNMGSYKYGWDTEIEMEYAPRGINEDIVRLISKKNEE
CEEECCCCEEHHCCCCHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHHCCCCC
PEWMTEWRLQAFRRWQTMTEPKWAMLNYPEIDYQDQYYYARPKSMQVKPKSLDEVDPKLL
CHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCEEEECCCCCCCCCCCCCCCCHHHH
ATYEKLGIPLKEQMILAGIEGAEGAPAEGRKVAVDAVFDSVSVGTTFKDELAKAGVIFCS
HHHHHHCCCHHHCEEEEECCCCCCCCCCCCEEEEEEHHCCCCCCCCCHHHHHHCCEEEEE
ISEAIREHPELVKKYLGSVVPQSDNFFATLNSAVFSDGSFVYVPPGVRCPMELSTYFRIN
HHHHHHHCHHHHHHHHHHHCCCCCCEEEEECHHHCCCCCEEEECCCCCCCCEEEEEEEEE
AENTGQFERTLIIADKGSYVSYLEGCTAPKRDVAQLHAAVVEIVVLEDAEVKYSTVQNWF
CCCCCCEEEEEEEEECCCHHHHHHCCCCCHHHHHHHHHHHHEEEEECCCCCCHHHHHCCC
PGDEEGKGGIYNFVTKRADCREARAKVMWTQVETGSAITWKYPSCILRGDESQGEFYSIA
CCCCCCCCCHHHHHHCCCHHHHHHHEEEEEEECCCCEEEEECCCEEEECCCCCCCEEEEE
IANNHQQADTGTKMIHLGKNTRSRIVSKGISAGQAQNTYRGLVSMHPRAKNSRNYTQCDS
EECCCCCCCCCCEEEEECCCHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHC
LLIGDKCGAHTVPYIEVKNTSSCVEHEATTSKVDDDQLFYCRQRGMDEEEAVALVVNGFC
EEECCCCCCCCCCEEEECCCHHHHHHCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHH
REVLQALPMEFAMEAQSLVAISLEGSVG
HHHHHHCCHHHHHCCCEEEEEEECCCCC
>Mature Secondary Structure 
TVEIGEAIEIREGVDRETVETVQNMGSYKYGWDTEIEMEYAPRGINEDIVRLISKKNEE
EEECCCCEEHHCCCCHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHHCCCCC
PEWMTEWRLQAFRRWQTMTEPKWAMLNYPEIDYQDQYYYARPKSMQVKPKSLDEVDPKLL
CHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCEEEECCCCCCCCCCCCCCCCHHHH
ATYEKLGIPLKEQMILAGIEGAEGAPAEGRKVAVDAVFDSVSVGTTFKDELAKAGVIFCS
HHHHHHCCCHHHCEEEEECCCCCCCCCCCCEEEEEEHHCCCCCCCCCHHHHHHCCEEEEE
ISEAIREHPELVKKYLGSVVPQSDNFFATLNSAVFSDGSFVYVPPGVRCPMELSTYFRIN
HHHHHHHCHHHHHHHHHHHCCCCCCEEEEECHHHCCCCCEEEECCCCCCCCEEEEEEEEE
AENTGQFERTLIIADKGSYVSYLEGCTAPKRDVAQLHAAVVEIVVLEDAEVKYSTVQNWF
CCCCCCEEEEEEEEECCCHHHHHHCCCCCHHHHHHHHHHHHEEEEECCCCCCHHHHHCCC
PGDEEGKGGIYNFVTKRADCREARAKVMWTQVETGSAITWKYPSCILRGDESQGEFYSIA
CCCCCCCCCHHHHHHCCCHHHHHHHEEEEEEECCCCEEEEECCCEEEECCCCCCCEEEEE
IANNHQQADTGTKMIHLGKNTRSRIVSKGISAGQAQNTYRGLVSMHPRAKNSRNYTQCDS
EECCCCCCCCCCEEEEECCCHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHC
LLIGDKCGAHTVPYIEVKNTSSCVEHEATTSKVDDDQLFYCRQRGMDEEEAVALVVNGFC
EEECCCCCCCCCCEEEECCCHHHHHHCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHH
REVLQALPMEFAMEAQSLVAISLEGSVG
HHHHHHCCHHHHHCCCEEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]