| Definition | Paracoccus denitrificans PD1222 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_008687 |
| Length | 1,730,097 |
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The map label for this gene is 119386609
Identifier: 119386609
GI number: 119386609
Start: 1036274
End: 1037143
Strand: Direct
Name: 119386609
Synonym: Pden_3902
Alternate gene names: NA
Gene position: 1036274-1037143 (Clockwise)
Preceding gene: 119386608
Following gene: 119386610
Centisome position: 59.9
GC content: 76.21
Gene sequence:
>870_bases GTGAGACCCTCGGCCGATCAGCTTCGCGCCCGGGCCGAGGCCGCCTCGGCGGCGTTGCCGGCGCTGATGCTGTCGGCCGA GCGGCTGGCGGCGGCGCTGGTGCCGGGCGCGCATGGCCAGCGCCGCGCCGGCATGGGCGAGGATTTCTGGCAATACCGTC CCGCCACCACGGGCGACACGGCGCGCAGCATCGACTGGCGCCGCTCGGCCCGCTCGGATGCGCAATTCGTCCGCGACCGC GAGGCGCAGGTGGCGCAATCGGCGGCGATCTGGGTCTCGGCCGCGGCGGGCATGGACTATACCGGCGGCACGGACCGGCC CGGCAAGCGCGACCGTGCCGACCTGCTGGCGCTGGCGTTGGCCATGGCGCTGCTGGCCGGGGGCGAGCGCGTGGCGCTGG CCGGCCAGCCGCCGCGCCCTGGCCGCCTGCAGGCCGAGCGCATGGCCCAGGCGCTGGTCGCCCGCCCGGCGCTGGACCGC GACGAGGATGCGCCGCCGGCCGAGGCCTTGCGTCCCGGCCAGCGGGTGATCCTGTTCGACGATTTCCTGGGCGATCCGCA GCCGGTGCTGGACTACCTTTCCCGCGCCGCCGGCCTGGGCGTGCAGGGCGTGCTGATGCAGGTCCTGGACCCGGACGAGG ACGGCTTTCCCTGGCGGGGCGCGGTGTTGTTCCGCTCGGCCTCGGGCGCTCTGCGCCACGACACGCGCGACGCGGCCGGG CTGCGCACGGCCTATCTGGCGCGGCTGGCCGAGCGGCGCGAGGTGCTGTCGCGCGCCGCCGCGACCGCGGGCTGGCATTT CGGCATGCATGACACCGGGGCGCCGCCGTCGCAGGCGTTGCTCTGGCTCTGGTCGGTGCTGGAGGGCTGA
Upstream 100 bases:
>100_bases TGCGCCATCGCATGGCGTTGAGCTTTGCCGCCCGTGCCCGCGGCGAGACCATCGAGGGCGTGATCGCGCGCCTGCTCGAC GACCGGATGCGGGCGGCGGC
Downstream 100 bases:
>100_bases TGCTGCTCATTGGTCCCCTCGGCTTCCTGACGCCCTGGATCCTCGCGGCGCTGGCCGCGCTGCCGGTGCTGTGGCTGATC CTGCGCGCCATGCCGCCTTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 289; Mature: 289
Protein sequence:
>289_residues MRPSADQLRARAEAASAALPALMLSAERLAAALVPGAHGQRRAGMGEDFWQYRPATTGDTARSIDWRRSARSDAQFVRDR EAQVAQSAAIWVSAAAGMDYTGGTDRPGKRDRADLLALALAMALLAGGERVALAGQPPRPGRLQAERMAQALVARPALDR DEDAPPAEALRPGQRVILFDDFLGDPQPVLDYLSRAAGLGVQGVLMQVLDPDEDGFPWRGAVLFRSASGALRHDTRDAAG LRTAYLARLAERREVLSRAAATAGWHFGMHDTGAPPSQALLWLWSVLEG
Sequences:
>Translated_289_residues MRPSADQLRARAEAASAALPALMLSAERLAAALVPGAHGQRRAGMGEDFWQYRPATTGDTARSIDWRRSARSDAQFVRDR EAQVAQSAAIWVSAAAGMDYTGGTDRPGKRDRADLLALALAMALLAGGERVALAGQPPRPGRLQAERMAQALVARPALDR DEDAPPAEALRPGQRVILFDDFLGDPQPVLDYLSRAAGLGVQGVLMQVLDPDEDGFPWRGAVLFRSASGALRHDTRDAAG LRTAYLARLAERREVLSRAAATAGWHFGMHDTGAPPSQALLWLWSVLEG >Mature_289_residues MRPSADQLRARAEAASAALPALMLSAERLAAALVPGAHGQRRAGMGEDFWQYRPATTGDTARSIDWRRSARSDAQFVRDR EAQVAQSAAIWVSAAAGMDYTGGTDRPGKRDRADLLALALAMALLAGGERVALAGQPPRPGRLQAERMAQALVARPALDR DEDAPPAEALRPGQRVILFDDFLGDPQPVLDYLSRAAGLGVQGVLMQVLDPDEDGFPWRGAVLFRSASGALRHDTRDAAG LRTAYLARLAERREVLSRAAATAGWHFGMHDTGAPPSQALLWLWSVLEG
Specific function: Unknown
COG id: COG1721
COG function: function code R; Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31018; Mature: 31018
Theoretical pI: Translated: 7.85; Mature: 7.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRPSADQLRARAEAASAALPALMLSAERLAAALVPGAHGQRRAGMGEDFWQYRPATTGDT CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCCCCCCH ARSIDWRRSARSDAQFVRDREAQVAQSAAIWVSAAAGMDYTGGTDRPGKRDRADLLALAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHH AMALLAGGERVALAGQPPRPGRLQAERMAQALVARPALDRDEDAPPAEALRPGQRVILFD HHHHHCCCCEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCEEEEEC DFLGDPQPVLDYLSRAAGLGVQGVLMQVLDPDEDGFPWRGAVLFRSASGALRHDTRDAAG CCCCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCEEEEECCCCCHHCCCHHHHH LRTAYLARLAERREVLSRAAATAGWHFGMHDTGAPPSQALLWLWSVLEG HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCC >Mature Secondary Structure MRPSADQLRARAEAASAALPALMLSAERLAAALVPGAHGQRRAGMGEDFWQYRPATTGDT CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCCCCCCH ARSIDWRRSARSDAQFVRDREAQVAQSAAIWVSAAAGMDYTGGTDRPGKRDRADLLALAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHH AMALLAGGERVALAGQPPRPGRLQAERMAQALVARPALDRDEDAPPAEALRPGQRVILFD HHHHHCCCCEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCEEEEEC DFLGDPQPVLDYLSRAAGLGVQGVLMQVLDPDEDGFPWRGAVLFRSASGALRHDTRDAAG CCCCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCEEEEECCCCCHHCCCHHHHH LRTAYLARLAERREVLSRAAATAGWHFGMHDTGAPPSQALLWLWSVLEG HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA