| Definition | Paracoccus denitrificans PD1222 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_008687 |
| Length | 1,730,097 |
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The map label for this gene is 119386610
Identifier: 119386610
GI number: 119386610
Start: 1037143
End: 1039062
Strand: Direct
Name: 119386610
Synonym: Pden_3903
Alternate gene names: NA
Gene position: 1037143-1039062 (Clockwise)
Preceding gene: 119386609
Following gene: 119386611
Centisome position: 59.95
GC content: 74.53
Gene sequence:
>1920_bases ATGCTGCTCATTGGTCCCCTCGGCTTCCTGACGCCCTGGATCCTCGCGGCGCTGGCCGCGCTGCCGGTGCTGTGGCTGAT CCTGCGCGCCATGCCGCCTTCGCCAAAGCTGGTGCGCTTTCCCGGCACGCGGTTGCTGCTGGGGCTCAGGGACCCGCATC CGGTGGCGCGTCACACGCCCTGGTGGCTGCTGCTCTTGCGGGTGCTGGCGATCGCGGCCTTGATCCTGGGCTTTGCCGGG CCGGTCTGGAAGCCGGCGCCGGATCAGGTCGGGCAGGGGCCTTTGCTGATCGTGATGGATGCCGGCTGGGCCGCGGCGCC CGACTGGCCGCAGCGTCAGGCCCGCGCCCTGCGCGCTCTGGATCGCGCGGCGGCGGCGGGACAGCCGGCGGCGCTGCTGG TCGCCGACGGCCGGGCCGAGGGCGTGCTGCCCTTCCTGCCCGCGACCGAGCTTGCCGCGCAGTTGCGGGCCCTGCGCCCC GCGGCATGGGAGACGCGCTATCCCCCCGATCCCCAGGCGGTGCTGGCCGAGGCGCCGGCGGGTCTTTCGGTGCTGTGGCT CAGCGATGGGCTGGACCATCCGGGGCGGGCGGAATGGCTGGCTGCGCTTTCGGGGCGCGGCAACGTGACCGTGGTGCCGC CGGAAGGCCCGCGCCAAGCGCTGGAACTGGTGCCGGGCGACCAGCCGGCGCTGCGAATGCGCTCGACCGGGACCGCGGTC GCCGAGGTGCTGGCCATCGGCCTCGACCCGCAGGGCACGCCGCGAGAGCTGGCGCGGCTGAAGCCCGGCGAGGGTTCTGC CGATGCGGGCGTGACCAGTTGGCCGGTTCCCATCGACCTGCCCTCCGAATTGCGCAACCGCATCACGCGCTTCGAGATCG AGGGCCATGCCTCGGCCGGCGCGGTGATGCTGGCCGATGACAGCCTGCGCCGGCGCAAGGTCGCGCTGGTCGGCGACGAC CGCGCCAGCGAGGGCCAGCGGCTGCTCTCGCCGCTGCATTACCTGCGCCGGGCGCTGGCGCCTTCGACCGACCTGATCGA GGGGGGGTTGGGCGATGTGCTGCAAGCCTCGCCCGACGTGGTCGTGCTGGCCGACCAGTTCGGACTGGCCGATGAGCCGG CCCTGCGCGAATGGGTCGAGGGCGGCGGGCTGCTGATCCGCTTTGCCGGGCCGCGCATGGCCGCGTCGGAGCGGCTGGCC GAGGAGCCGCTCTTGCCCGTGCGGCTGCGCGCCGGCGGGCGCGACATCGGCGGGGCGCTTGCCTGGGGCGAGCCGCGCGG CATCTCGGCCTTTGCCCCCGACGGGCCCTTCGCGGGGCTCTTGGTACCGGACGATACGACCGTGCGCGCGCAACTCCTGG CCGAGCCGGCGCCGGACCTGGCCGACCGCAGCATCGCCCGGCTTTCGGACGGCACGCCGCTGGTGACGCGCGCGGCCCTG GGGCAGGGGCAACTGGTGCTGTTTCACACCACGGCCAACGCGGAATGGTCGAACCTGGCGATCTCGGGCCTGTTCGTCGA GATGCTGGACCGGCTGGTGCGCAGCGCCCGGGTCGGCGCCGGGGCGCCCGAGGCGGATCGCGCCGAACAGCCCTTCTGGC TGCCCGAACTGGTGCTGGACGGCTTTGGCCGCACCACCGAGCCTCAGGACACCGCCCCGGTCGCCGCCGCCGATTTCGCG CGCGGCCCGGCCCCGGGCGCTCCGGCCGGGCTTTATCGCGGCGGCGAGCGGGTGGCGGCCCTGAATGCGGGCGGGCCGAT CGCGACGGCCGATTGGCCCGGCGCCCATATTGAGCGCGGGGCGCAGGCGCCGGGCTTCGACCTGCGCGGCTGGTTGATTG CGCTGGCCGCAGCGCTTCTGGCGCTGGACGCGCTCGGCAGCGCCTGGCTGGCTCGCGGCAGGCAGAGGGCGATGGCATGA
Upstream 100 bases:
>100_bases CGCGCGCCGCCGCGACCGCGGGCTGGCATTTCGGCATGCATGACACCGGGGCGCCGCCGTCGCAGGCGTTGCTCTGGCTC TGGTCGGTGCTGGAGGGCTG
Downstream 100 bases:
>100_bases TGAGAAGATGGCTTGCCCCCCTTGCCCTGCTGTTCTGGGCCACGGCCCTTTCGGCGCAGGACGAGCCCGACCCCCGGCTG GTGCGCGCGGCCGACGAGGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 639; Mature: 639
Protein sequence:
>639_residues MLLIGPLGFLTPWILAALAALPVLWLILRAMPPSPKLVRFPGTRLLLGLRDPHPVARHTPWWLLLLRVLAIAALILGFAG PVWKPAPDQVGQGPLLIVMDAGWAAAPDWPQRQARALRALDRAAAAGQPAALLVADGRAEGVLPFLPATELAAQLRALRP AAWETRYPPDPQAVLAEAPAGLSVLWLSDGLDHPGRAEWLAALSGRGNVTVVPPEGPRQALELVPGDQPALRMRSTGTAV AEVLAIGLDPQGTPRELARLKPGEGSADAGVTSWPVPIDLPSELRNRITRFEIEGHASAGAVMLADDSLRRRKVALVGDD RASEGQRLLSPLHYLRRALAPSTDLIEGGLGDVLQASPDVVVLADQFGLADEPALREWVEGGGLLIRFAGPRMAASERLA EEPLLPVRLRAGGRDIGGALAWGEPRGISAFAPDGPFAGLLVPDDTTVRAQLLAEPAPDLADRSIARLSDGTPLVTRAAL GQGQLVLFHTTANAEWSNLAISGLFVEMLDRLVRSARVGAGAPEADRAEQPFWLPELVLDGFGRTTEPQDTAPVAAADFA RGPAPGAPAGLYRGGERVAALNAGGPIATADWPGAHIERGAQAPGFDLRGWLIALAAALLALDALGSAWLARGRQRAMA
Sequences:
>Translated_639_residues MLLIGPLGFLTPWILAALAALPVLWLILRAMPPSPKLVRFPGTRLLLGLRDPHPVARHTPWWLLLLRVLAIAALILGFAG PVWKPAPDQVGQGPLLIVMDAGWAAAPDWPQRQARALRALDRAAAAGQPAALLVADGRAEGVLPFLPATELAAQLRALRP AAWETRYPPDPQAVLAEAPAGLSVLWLSDGLDHPGRAEWLAALSGRGNVTVVPPEGPRQALELVPGDQPALRMRSTGTAV AEVLAIGLDPQGTPRELARLKPGEGSADAGVTSWPVPIDLPSELRNRITRFEIEGHASAGAVMLADDSLRRRKVALVGDD RASEGQRLLSPLHYLRRALAPSTDLIEGGLGDVLQASPDVVVLADQFGLADEPALREWVEGGGLLIRFAGPRMAASERLA EEPLLPVRLRAGGRDIGGALAWGEPRGISAFAPDGPFAGLLVPDDTTVRAQLLAEPAPDLADRSIARLSDGTPLVTRAAL GQGQLVLFHTTANAEWSNLAISGLFVEMLDRLVRSARVGAGAPEADRAEQPFWLPELVLDGFGRTTEPQDTAPVAAADFA RGPAPGAPAGLYRGGERVAALNAGGPIATADWPGAHIERGAQAPGFDLRGWLIALAAALLALDALGSAWLARGRQRAMA >Mature_639_residues MLLIGPLGFLTPWILAALAALPVLWLILRAMPPSPKLVRFPGTRLLLGLRDPHPVARHTPWWLLLLRVLAIAALILGFAG PVWKPAPDQVGQGPLLIVMDAGWAAAPDWPQRQARALRALDRAAAAGQPAALLVADGRAEGVLPFLPATELAAQLRALRP AAWETRYPPDPQAVLAEAPAGLSVLWLSDGLDHPGRAEWLAALSGRGNVTVVPPEGPRQALELVPGDQPALRMRSTGTAV AEVLAIGLDPQGTPRELARLKPGEGSADAGVTSWPVPIDLPSELRNRITRFEIEGHASAGAVMLADDSLRRRKVALVGDD RASEGQRLLSPLHYLRRALAPSTDLIEGGLGDVLQASPDVVVLADQFGLADEPALREWVEGGGLLIRFAGPRMAASERLA EEPLLPVRLRAGGRDIGGALAWGEPRGISAFAPDGPFAGLLVPDDTTVRAQLLAEPAPDLADRSIARLSDGTPLVTRAAL GQGQLVLFHTTANAEWSNLAISGLFVEMLDRLVRSARVGAGAPEADRAEQPFWLPELVLDGFGRTTEPQDTAPVAAADFA RGPAPGAPAGLYRGGERVAALNAGGPIATADWPGAHIERGAQAPGFDLRGWLIALAAALLALDALGSAWLARGRQRAMA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 67272; Mature: 67272
Theoretical pI: Translated: 5.58; Mature: 5.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLIGPLGFLTPWILAALAALPVLWLILRAMPPSPKLVRFPGTRLLLGLRDPHPVARHTP CEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCEEEEECCCCCCCCCCCH WWLLLLRVLAIAALILGFAGPVWKPAPDQVGQGPLLIVMDAGWAAAPDWPQRQARALRAL HHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCCCCEEEEEECCCCCCCCCHHHHHHHHHHH DRAAAAGQPAALLVADGRAEGVLPFLPATELAAQLRALRPAAWETRYPPDPQAVLAEAPA HHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCC GLSVLWLSDGLDHPGRAEWLAALSGRGNVTVVPPEGPRQALELVPGDQPALRMRSTGTAV CCEEEEEECCCCCCCHHHHHHHHCCCCCEEEECCCCHHHHHHHCCCCCCCEEECCCHHHH AEVLAIGLDPQGTPRELARLKPGEGSADAGVTSWPVPIDLPSELRNRITRFEIEGHASAG HHHHHHCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHCCEEEEEECCCCCC AVMLADDSLRRRKVALVGDDRASEGQRLLSPLHYLRRALAPSTDLIEGGLGDVLQASPDV EEEEECCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCHHHCCCCCHHHHCCCCE VVLADQFGLADEPALREWVEGGGLLIRFAGPRMAASERLAEEPLLPVRLRAGGRDIGGAL EEEECCCCCCCCHHHHHHHCCCCEEEEECCCCHHHHHHHHHCCCCEEEEECCCCCCCCEE AWGEPRGISAFAPDGPFAGLLVPDDTTVRAQLLAEPAPDLADRSIARLSDGTPLVTRAAL ECCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHC GQGQLVLFHTTANAEWSNLAISGLFVEMLDRLVRSARVGAGAPEADRAEQPFWLPELVLD CCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHH GFGRTTEPQDTAPVAAADFARGPAPGAPAGLYRGGERVAALNAGGPIATADWPGAHIERG CCCCCCCCCCCCCCHHHHHCCCCCCCCCHHHCCCCCEEEEEECCCCEEECCCCCHHHHCC AQAPGFDLRGWLIALAAALLALDALGSAWLARGRQRAMA CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MLLIGPLGFLTPWILAALAALPVLWLILRAMPPSPKLVRFPGTRLLLGLRDPHPVARHTP CEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCEEEEECCCCCCCCCCCH WWLLLLRVLAIAALILGFAGPVWKPAPDQVGQGPLLIVMDAGWAAAPDWPQRQARALRAL HHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCCCCEEEEEECCCCCCCCCHHHHHHHHHHH DRAAAAGQPAALLVADGRAEGVLPFLPATELAAQLRALRPAAWETRYPPDPQAVLAEAPA HHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCC GLSVLWLSDGLDHPGRAEWLAALSGRGNVTVVPPEGPRQALELVPGDQPALRMRSTGTAV CCEEEEEECCCCCCCHHHHHHHHCCCCCEEEECCCCHHHHHHHCCCCCCCEEECCCHHHH AEVLAIGLDPQGTPRELARLKPGEGSADAGVTSWPVPIDLPSELRNRITRFEIEGHASAG HHHHHHCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHCCEEEEEECCCCCC AVMLADDSLRRRKVALVGDDRASEGQRLLSPLHYLRRALAPSTDLIEGGLGDVLQASPDV EEEEECCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCHHHCCCCCHHHHCCCCE VVLADQFGLADEPALREWVEGGGLLIRFAGPRMAASERLAEEPLLPVRLRAGGRDIGGAL EEEECCCCCCCCHHHHHHHCCCCEEEEECCCCHHHHHHHHHCCCCEEEEECCCCCCCCEE AWGEPRGISAFAPDGPFAGLLVPDDTTVRAQLLAEPAPDLADRSIARLSDGTPLVTRAAL ECCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHC GQGQLVLFHTTANAEWSNLAISGLFVEMLDRLVRSARVGAGAPEADRAEQPFWLPELVLD CCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHH GFGRTTEPQDTAPVAAADFARGPAPGAPAGLYRGGERVAALNAGGPIATADWPGAHIERG CCCCCCCCCCCCCCHHHHHCCCCCCCCCHHHCCCCCEEEEEECCCCEEECCCCCHHHHCC AQAPGFDLRGWLIALAAALLALDALGSAWLARGRQRAMA CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA