Definition Paracoccus denitrificans PD1222 chromosome 2, complete sequence.
Accession NC_008687
Length 1,730,097

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The map label for this gene is 119386610

Identifier: 119386610

GI number: 119386610

Start: 1037143

End: 1039062

Strand: Direct

Name: 119386610

Synonym: Pden_3903

Alternate gene names: NA

Gene position: 1037143-1039062 (Clockwise)

Preceding gene: 119386609

Following gene: 119386611

Centisome position: 59.95

GC content: 74.53

Gene sequence:

>1920_bases
ATGCTGCTCATTGGTCCCCTCGGCTTCCTGACGCCCTGGATCCTCGCGGCGCTGGCCGCGCTGCCGGTGCTGTGGCTGAT
CCTGCGCGCCATGCCGCCTTCGCCAAAGCTGGTGCGCTTTCCCGGCACGCGGTTGCTGCTGGGGCTCAGGGACCCGCATC
CGGTGGCGCGTCACACGCCCTGGTGGCTGCTGCTCTTGCGGGTGCTGGCGATCGCGGCCTTGATCCTGGGCTTTGCCGGG
CCGGTCTGGAAGCCGGCGCCGGATCAGGTCGGGCAGGGGCCTTTGCTGATCGTGATGGATGCCGGCTGGGCCGCGGCGCC
CGACTGGCCGCAGCGTCAGGCCCGCGCCCTGCGCGCTCTGGATCGCGCGGCGGCGGCGGGACAGCCGGCGGCGCTGCTGG
TCGCCGACGGCCGGGCCGAGGGCGTGCTGCCCTTCCTGCCCGCGACCGAGCTTGCCGCGCAGTTGCGGGCCCTGCGCCCC
GCGGCATGGGAGACGCGCTATCCCCCCGATCCCCAGGCGGTGCTGGCCGAGGCGCCGGCGGGTCTTTCGGTGCTGTGGCT
CAGCGATGGGCTGGACCATCCGGGGCGGGCGGAATGGCTGGCTGCGCTTTCGGGGCGCGGCAACGTGACCGTGGTGCCGC
CGGAAGGCCCGCGCCAAGCGCTGGAACTGGTGCCGGGCGACCAGCCGGCGCTGCGAATGCGCTCGACCGGGACCGCGGTC
GCCGAGGTGCTGGCCATCGGCCTCGACCCGCAGGGCACGCCGCGAGAGCTGGCGCGGCTGAAGCCCGGCGAGGGTTCTGC
CGATGCGGGCGTGACCAGTTGGCCGGTTCCCATCGACCTGCCCTCCGAATTGCGCAACCGCATCACGCGCTTCGAGATCG
AGGGCCATGCCTCGGCCGGCGCGGTGATGCTGGCCGATGACAGCCTGCGCCGGCGCAAGGTCGCGCTGGTCGGCGACGAC
CGCGCCAGCGAGGGCCAGCGGCTGCTCTCGCCGCTGCATTACCTGCGCCGGGCGCTGGCGCCTTCGACCGACCTGATCGA
GGGGGGGTTGGGCGATGTGCTGCAAGCCTCGCCCGACGTGGTCGTGCTGGCCGACCAGTTCGGACTGGCCGATGAGCCGG
CCCTGCGCGAATGGGTCGAGGGCGGCGGGCTGCTGATCCGCTTTGCCGGGCCGCGCATGGCCGCGTCGGAGCGGCTGGCC
GAGGAGCCGCTCTTGCCCGTGCGGCTGCGCGCCGGCGGGCGCGACATCGGCGGGGCGCTTGCCTGGGGCGAGCCGCGCGG
CATCTCGGCCTTTGCCCCCGACGGGCCCTTCGCGGGGCTCTTGGTACCGGACGATACGACCGTGCGCGCGCAACTCCTGG
CCGAGCCGGCGCCGGACCTGGCCGACCGCAGCATCGCCCGGCTTTCGGACGGCACGCCGCTGGTGACGCGCGCGGCCCTG
GGGCAGGGGCAACTGGTGCTGTTTCACACCACGGCCAACGCGGAATGGTCGAACCTGGCGATCTCGGGCCTGTTCGTCGA
GATGCTGGACCGGCTGGTGCGCAGCGCCCGGGTCGGCGCCGGGGCGCCCGAGGCGGATCGCGCCGAACAGCCCTTCTGGC
TGCCCGAACTGGTGCTGGACGGCTTTGGCCGCACCACCGAGCCTCAGGACACCGCCCCGGTCGCCGCCGCCGATTTCGCG
CGCGGCCCGGCCCCGGGCGCTCCGGCCGGGCTTTATCGCGGCGGCGAGCGGGTGGCGGCCCTGAATGCGGGCGGGCCGAT
CGCGACGGCCGATTGGCCCGGCGCCCATATTGAGCGCGGGGCGCAGGCGCCGGGCTTCGACCTGCGCGGCTGGTTGATTG
CGCTGGCCGCAGCGCTTCTGGCGCTGGACGCGCTCGGCAGCGCCTGGCTGGCTCGCGGCAGGCAGAGGGCGATGGCATGA

Upstream 100 bases:

>100_bases
CGCGCGCCGCCGCGACCGCGGGCTGGCATTTCGGCATGCATGACACCGGGGCGCCGCCGTCGCAGGCGTTGCTCTGGCTC
TGGTCGGTGCTGGAGGGCTG

Downstream 100 bases:

>100_bases
TGAGAAGATGGCTTGCCCCCCTTGCCCTGCTGTTCTGGGCCACGGCCCTTTCGGCGCAGGACGAGCCCGACCCCCGGCTG
GTGCGCGCGGCCGACGAGGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 639; Mature: 639

Protein sequence:

>639_residues
MLLIGPLGFLTPWILAALAALPVLWLILRAMPPSPKLVRFPGTRLLLGLRDPHPVARHTPWWLLLLRVLAIAALILGFAG
PVWKPAPDQVGQGPLLIVMDAGWAAAPDWPQRQARALRALDRAAAAGQPAALLVADGRAEGVLPFLPATELAAQLRALRP
AAWETRYPPDPQAVLAEAPAGLSVLWLSDGLDHPGRAEWLAALSGRGNVTVVPPEGPRQALELVPGDQPALRMRSTGTAV
AEVLAIGLDPQGTPRELARLKPGEGSADAGVTSWPVPIDLPSELRNRITRFEIEGHASAGAVMLADDSLRRRKVALVGDD
RASEGQRLLSPLHYLRRALAPSTDLIEGGLGDVLQASPDVVVLADQFGLADEPALREWVEGGGLLIRFAGPRMAASERLA
EEPLLPVRLRAGGRDIGGALAWGEPRGISAFAPDGPFAGLLVPDDTTVRAQLLAEPAPDLADRSIARLSDGTPLVTRAAL
GQGQLVLFHTTANAEWSNLAISGLFVEMLDRLVRSARVGAGAPEADRAEQPFWLPELVLDGFGRTTEPQDTAPVAAADFA
RGPAPGAPAGLYRGGERVAALNAGGPIATADWPGAHIERGAQAPGFDLRGWLIALAAALLALDALGSAWLARGRQRAMA

Sequences:

>Translated_639_residues
MLLIGPLGFLTPWILAALAALPVLWLILRAMPPSPKLVRFPGTRLLLGLRDPHPVARHTPWWLLLLRVLAIAALILGFAG
PVWKPAPDQVGQGPLLIVMDAGWAAAPDWPQRQARALRALDRAAAAGQPAALLVADGRAEGVLPFLPATELAAQLRALRP
AAWETRYPPDPQAVLAEAPAGLSVLWLSDGLDHPGRAEWLAALSGRGNVTVVPPEGPRQALELVPGDQPALRMRSTGTAV
AEVLAIGLDPQGTPRELARLKPGEGSADAGVTSWPVPIDLPSELRNRITRFEIEGHASAGAVMLADDSLRRRKVALVGDD
RASEGQRLLSPLHYLRRALAPSTDLIEGGLGDVLQASPDVVVLADQFGLADEPALREWVEGGGLLIRFAGPRMAASERLA
EEPLLPVRLRAGGRDIGGALAWGEPRGISAFAPDGPFAGLLVPDDTTVRAQLLAEPAPDLADRSIARLSDGTPLVTRAAL
GQGQLVLFHTTANAEWSNLAISGLFVEMLDRLVRSARVGAGAPEADRAEQPFWLPELVLDGFGRTTEPQDTAPVAAADFA
RGPAPGAPAGLYRGGERVAALNAGGPIATADWPGAHIERGAQAPGFDLRGWLIALAAALLALDALGSAWLARGRQRAMA
>Mature_639_residues
MLLIGPLGFLTPWILAALAALPVLWLILRAMPPSPKLVRFPGTRLLLGLRDPHPVARHTPWWLLLLRVLAIAALILGFAG
PVWKPAPDQVGQGPLLIVMDAGWAAAPDWPQRQARALRALDRAAAAGQPAALLVADGRAEGVLPFLPATELAAQLRALRP
AAWETRYPPDPQAVLAEAPAGLSVLWLSDGLDHPGRAEWLAALSGRGNVTVVPPEGPRQALELVPGDQPALRMRSTGTAV
AEVLAIGLDPQGTPRELARLKPGEGSADAGVTSWPVPIDLPSELRNRITRFEIEGHASAGAVMLADDSLRRRKVALVGDD
RASEGQRLLSPLHYLRRALAPSTDLIEGGLGDVLQASPDVVVLADQFGLADEPALREWVEGGGLLIRFAGPRMAASERLA
EEPLLPVRLRAGGRDIGGALAWGEPRGISAFAPDGPFAGLLVPDDTTVRAQLLAEPAPDLADRSIARLSDGTPLVTRAAL
GQGQLVLFHTTANAEWSNLAISGLFVEMLDRLVRSARVGAGAPEADRAEQPFWLPELVLDGFGRTTEPQDTAPVAAADFA
RGPAPGAPAGLYRGGERVAALNAGGPIATADWPGAHIERGAQAPGFDLRGWLIALAAALLALDALGSAWLARGRQRAMA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 67272; Mature: 67272

Theoretical pI: Translated: 5.58; Mature: 5.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLIGPLGFLTPWILAALAALPVLWLILRAMPPSPKLVRFPGTRLLLGLRDPHPVARHTP
CEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCEEEEECCCCCCCCCCCH
WWLLLLRVLAIAALILGFAGPVWKPAPDQVGQGPLLIVMDAGWAAAPDWPQRQARALRAL
HHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCCCCEEEEEECCCCCCCCCHHHHHHHHHHH
DRAAAAGQPAALLVADGRAEGVLPFLPATELAAQLRALRPAAWETRYPPDPQAVLAEAPA
HHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCC
GLSVLWLSDGLDHPGRAEWLAALSGRGNVTVVPPEGPRQALELVPGDQPALRMRSTGTAV
CCEEEEEECCCCCCCHHHHHHHHCCCCCEEEECCCCHHHHHHHCCCCCCCEEECCCHHHH
AEVLAIGLDPQGTPRELARLKPGEGSADAGVTSWPVPIDLPSELRNRITRFEIEGHASAG
HHHHHHCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHCCEEEEEECCCCCC
AVMLADDSLRRRKVALVGDDRASEGQRLLSPLHYLRRALAPSTDLIEGGLGDVLQASPDV
EEEEECCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCHHHCCCCCHHHHCCCCE
VVLADQFGLADEPALREWVEGGGLLIRFAGPRMAASERLAEEPLLPVRLRAGGRDIGGAL
EEEECCCCCCCCHHHHHHHCCCCEEEEECCCCHHHHHHHHHCCCCEEEEECCCCCCCCEE
AWGEPRGISAFAPDGPFAGLLVPDDTTVRAQLLAEPAPDLADRSIARLSDGTPLVTRAAL
ECCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHC
GQGQLVLFHTTANAEWSNLAISGLFVEMLDRLVRSARVGAGAPEADRAEQPFWLPELVLD
CCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHH
GFGRTTEPQDTAPVAAADFARGPAPGAPAGLYRGGERVAALNAGGPIATADWPGAHIERG
CCCCCCCCCCCCCCHHHHHCCCCCCCCCHHHCCCCCEEEEEECCCCEEECCCCCHHHHCC
AQAPGFDLRGWLIALAAALLALDALGSAWLARGRQRAMA
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLLIGPLGFLTPWILAALAALPVLWLILRAMPPSPKLVRFPGTRLLLGLRDPHPVARHTP
CEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCEEEEECCCCCCCCCCCH
WWLLLLRVLAIAALILGFAGPVWKPAPDQVGQGPLLIVMDAGWAAAPDWPQRQARALRAL
HHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCCCCEEEEEECCCCCCCCCHHHHHHHHHHH
DRAAAAGQPAALLVADGRAEGVLPFLPATELAAQLRALRPAAWETRYPPDPQAVLAEAPA
HHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCC
GLSVLWLSDGLDHPGRAEWLAALSGRGNVTVVPPEGPRQALELVPGDQPALRMRSTGTAV
CCEEEEEECCCCCCCHHHHHHHHCCCCCEEEECCCCHHHHHHHCCCCCCCEEECCCHHHH
AEVLAIGLDPQGTPRELARLKPGEGSADAGVTSWPVPIDLPSELRNRITRFEIEGHASAG
HHHHHHCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHCCEEEEEECCCCCC
AVMLADDSLRRRKVALVGDDRASEGQRLLSPLHYLRRALAPSTDLIEGGLGDVLQASPDV
EEEEECCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCHHHCCCCCHHHHCCCCE
VVLADQFGLADEPALREWVEGGGLLIRFAGPRMAASERLAEEPLLPVRLRAGGRDIGGAL
EEEECCCCCCCCHHHHHHHCCCCEEEEECCCCHHHHHHHHHCCCCEEEEECCCCCCCCEE
AWGEPRGISAFAPDGPFAGLLVPDDTTVRAQLLAEPAPDLADRSIARLSDGTPLVTRAAL
ECCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHC
GQGQLVLFHTTANAEWSNLAISGLFVEMLDRLVRSARVGAGAPEADRAEQPFWLPELVLD
CCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHH
GFGRTTEPQDTAPVAAADFARGPAPGAPAGLYRGGERVAALNAGGPIATADWPGAHIERG
CCCCCCCCCCCCCCHHHHHCCCCCCCCCHHHCCCCCEEEEEECCCCEEECCCCCHHHHCC
AQAPGFDLRGWLIALAAALLALDALGSAWLARGRQRAMA
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA