| Definition | Paracoccus denitrificans PD1222 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_008687 |
| Length | 1,730,097 |
Click here to switch to the map view.
The map label for this gene is minD [C]
Identifier: 119386594
GI number: 119386594
Start: 1018726
End: 1019508
Strand: Direct
Name: minD [C]
Synonym: Pden_3887
Alternate gene names: 119386594
Gene position: 1018726-1019508 (Clockwise)
Preceding gene: 119386592
Following gene: 119386595
Centisome position: 58.88
GC content: 66.28
Gene sequence:
>783_bases GTGGCGCATATCATCGTCGTCGGGAACGAAAAGGGCGGTTCGGGCAAGTCCACGACCTCGATGCATGTGGCGACCGCGCT GGCGCGCATGGGCCATAAGGTCGGCGCGCTGGACCTGGACGTGCGCCAGCGCAGCTTCGGCCGTTATCTGGAGAACCGCG CCGCCTTTGCCCAACGCGAGGGGCTGGACCTGCCGACGCCGCTGCTGGGGCATCTGGAGCCCGAAAGCCCCGGCGGCCCC GACCCCTTGTCGCAGGCGGTGGACGCGCTGGACCGGGAATGCGATTTCATCCTGCTGGACTGCCCCGGCTCGCATACGCG GCTCAGCCAGATGGCGCATACGCTGGCCGACACGCTGATCACGCCGATGAACGACAGTTTCGTCGATTTCGACCTCTTGG CCCGCATGTCGCCCGAGGGCAGGATCCTCGGCCCCTCGATCTATGCCGAGATGGTCTGGTCCGCCCGCCAGTTGCGCGGC GAGGCCGGTGCCGGGCCGATCGACTGGCTGGTGCTGCGCAACCGGCTGGGCACGCAGGCGATGCACAACAAGCGCAAGGT CGGCGGCGCATTGACCACGCTGTCCAAGCGCATCGGCTTTCGCGTCGCGCCCGGTTTTTCCGAGCGGGTGATCTTTCGCG AGCTGTTTCCGCGCGGATTGACGCTCCTGGACCTCAAGGATATCGGCACGGAACAGCTCAGCATGTCGAATATCGCCGCC CGCCAGGAACTGCGTGAGCTGATCGGCGAGTTGAACCTACCCGGCGTCAGCGTTTCCTTCTGA
Upstream 100 bases:
>100_bases GCACGCCTCCCGTTGCGATTCGGCCGGTCTCGACGCTTTTCATCGTGGCGGGCGCGGCCTATGGTCCGGCGCGACGCGGG CGGGCATCGCAGGGGGATTC
Downstream 100 bases:
>100_bases AACCCGGCTGGCATTGTTGCCGGCGACTGGCGCCATTATGTTGCGCCGCAGATTGGTTTGGAGGGGACGATGACGGCAAC CTGCCGGATCACCCGGATCG
Product: chromosome partitioning protein
Products: NA
Alternate protein names: Chromosome Partitioning Protein; ATPases Involved In Chromosome Partitioning-Like Protein; ATPase; Chromosome Partitioning Protein ParA; Chromosome Partitioning Protein-Like Protein; Chromosome Partitioning ATPase Protein-Like; ATPase MipZ Superfamily; Chromosome Partitioning Protein MipZ; Division Plane Positioning ATPase MipZ; Chromosome Partitioning ATPase; ATPase Involved In Chromosome Partitioning; ATPases Involved In Chromosome Partitioning-Like; ATPase Mipz; ParA-Like Protein
Number of amino acids: Translated: 260; Mature: 259
Protein sequence:
>260_residues MAHIIVVGNEKGGSGKSTTSMHVATALARMGHKVGALDLDVRQRSFGRYLENRAAFAQREGLDLPTPLLGHLEPESPGGP DPLSQAVDALDRECDFILLDCPGSHTRLSQMAHTLADTLITPMNDSFVDFDLLARMSPEGRILGPSIYAEMVWSARQLRG EAGAGPIDWLVLRNRLGTQAMHNKRKVGGALTTLSKRIGFRVAPGFSERVIFRELFPRGLTLLDLKDIGTEQLSMSNIAA RQELRELIGELNLPGVSVSF
Sequences:
>Translated_260_residues MAHIIVVGNEKGGSGKSTTSMHVATALARMGHKVGALDLDVRQRSFGRYLENRAAFAQREGLDLPTPLLGHLEPESPGGP DPLSQAVDALDRECDFILLDCPGSHTRLSQMAHTLADTLITPMNDSFVDFDLLARMSPEGRILGPSIYAEMVWSARQLRG EAGAGPIDWLVLRNRLGTQAMHNKRKVGGALTTLSKRIGFRVAPGFSERVIFRELFPRGLTLLDLKDIGTEQLSMSNIAA RQELRELIGELNLPGVSVSF >Mature_259_residues AHIIVVGNEKGGSGKSTTSMHVATALARMGHKVGALDLDVRQRSFGRYLENRAAFAQREGLDLPTPLLGHLEPESPGGPD PLSQAVDALDRECDFILLDCPGSHTRLSQMAHTLADTLITPMNDSFVDFDLLARMSPEGRILGPSIYAEMVWSARQLRGE AGAGPIDWLVLRNRLGTQAMHNKRKVGGALTTLSKRIGFRVAPGFSERVIFRELFPRGLTLLDLKDIGTEQLSMSNIAAR QELRELIGELNLPGVSVSF
Specific function: ATPase Required For The Correct Placement Of The Division Site. Cell Division Inhibitors Minc And Mind Act In Concert To Form An Inhibitor Capable Of Blocking Formation Of The Polar Z Ring Septums. Rapidly Oscillates Between The Poles Of The Cell To Dest
COG id: COG1192
COG function: function code D; ATPases involved in chromosome partitioning
Gene ontology:
Cell location: Inner Membrane-Associated [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 300 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28351; Mature: 28220
Theoretical pI: Translated: 7.22; Mature: 7.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAHIIVVGNEKGGSGKSTTSMHVATALARMGHKVGALDLDVRQRSFGRYLENRAAFAQRE CEEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHC GLDLPTPLLGHLEPESPGGPDPLSQAVDALDRECDFILLDCPGSHTRLSQMAHTLADTLI CCCCCCCHHCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHH TPMNDSFVDFDLLARMSPEGRILGPSIYAEMVWSARQLRGEAGAGPIDWLVLRNRLGTQA CCCCCCCCCHHHHHHCCCCCCEECHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH MHNKRKVGGALTTLSKRIGFRVAPGFSERVIFRELFPRGLTLLDLKDIGTEQLSMSNIAA HHHHHHHHHHHHHHHHHCCEEECCCCHHHHHHHHHHHCCCEEEEHHHCCHHHHHHHHHHH RQELRELIGELNLPGVSVSF HHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure AHIIVVGNEKGGSGKSTTSMHVATALARMGHKVGALDLDVRQRSFGRYLENRAAFAQRE EEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHC GLDLPTPLLGHLEPESPGGPDPLSQAVDALDRECDFILLDCPGSHTRLSQMAHTLADTLI CCCCCCCHHCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHH TPMNDSFVDFDLLARMSPEGRILGPSIYAEMVWSARQLRGEAGAGPIDWLVLRNRLGTQA CCCCCCCCCHHHHHHCCCCCCEECHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH MHNKRKVGGALTTLSKRIGFRVAPGFSERVIFRELFPRGLTLLDLKDIGTEQLSMSNIAA HHHHHHHHHHHHHHHHHCCEEECCCCHHHHHHHHHHHCCCEEEEHHHCCHHHHHHHHHHH RQELRELIGELNLPGVSVSF HHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA