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The map label for this gene is ugpA [C]

Identifier: 119386117

GI number: 119386117

Start: 549751

End: 550623

Strand: Direct

Name: ugpA [C]

Synonym: Pden_3405

Alternate gene names: 119386117

Gene position: 549751-550623 (Clockwise)

Preceding gene: 119386116

Following gene: 119386118

Centisome position: 31.78

GC content: 61.51

Gene sequence:

>873_bases
ATGGAATGGCTTGAACGCAACGTGCCCAAGCTGGTCTTGGCGCCGTCTTTCGTGGCGATTCTGGTGTTCGTCTATGGCTT
CATCGCCTGGACTGCCTGGATCAGCCTGACACGCTCGCGCCTGATGCCGCGCTATGAATTCGAGGGTATCGGACAATACG
AGCGCCTGTTCGCCGCGCCGCGTTGGGATGTGGCGATGGACAACCTGTTCATCTTCGGCGGGCTGTTCATCGTGATCTCG
ATGGTGATCGGGCTGATGCTGGCGATCTTTCTGGACCAGAGGATCCGTGCCGAGGGCGTCCTGCGCACCGTCTACCTTTA
TCCGATGGCGCTGTCGCTGATCGTGACGGGGACGGCGTGGAAATGGATCCTGAACCCCGGTCTGGGCATTCAGGCCACCG
TGCGAAGCTGGGGGTTCGAGAACTTCACCTTCGACTGGCTGATCCGCCCCGAGATGGCGATCTATACCATCGTGCTGGCC
GCTGTCTGGCAGGCCTCGGGTTTCGTGATGGCGCTGTTCCTGGCCGGGCTGCGCTCGGTCGATACCGAGATCATCCGGGC
CGCGCAGGTGGACGGCATCCCGACGCACCGCATCTATTCCGCGATCATCATCCCGACCATGGCGCCGATCTTCCTGTCGG
CCTTCATCGTGCTGGCGCATCTGGCGATCAAGGCGTTCGACCTGGTGATCGCGCTTACCAATGGCGGCCCCGGCTATGCG
ACCGACCTGCCTGCGACCTACATGTACGCGATGGCGTTCTCGCGCGGCGATCTGGGTCAGGCGGCGGCAAGCGCGATGGT
CATGATGATGGTGATCTTCGCCATCGTCGTTCCCTATCTCTATAGCGAATTGAGGCCCCGCCATGACAAGTAA

Upstream 100 bases:

>100_bases
GCAACTGGCCAACGCCGTCGCGAGCGCGATGTAAGGCCGACAGCCCCGCATCCGGCCGCAAGCCCGGGTGCGGGGTTTCC
TTTCTGGGGGAAATCGGGAA

Downstream 100 bases:

>100_bases
GGCCGTGACCAGTAACACCATGCTGCGTTGGGGCCTTTATGCGGTCCTGATCCTGTTCGCGCTGTTCTACCTGATGCCGC
TGTTCGTGATGCTGACCACA

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 290; Mature: 290

Protein sequence:

>290_residues
MEWLERNVPKLVLAPSFVAILVFVYGFIAWTAWISLTRSRLMPRYEFEGIGQYERLFAAPRWDVAMDNLFIFGGLFIVIS
MVIGLMLAIFLDQRIRAEGVLRTVYLYPMALSLIVTGTAWKWILNPGLGIQATVRSWGFENFTFDWLIRPEMAIYTIVLA
AVWQASGFVMALFLAGLRSVDTEIIRAAQVDGIPTHRIYSAIIIPTMAPIFLSAFIVLAHLAIKAFDLVIALTNGGPGYA
TDLPATYMYAMAFSRGDLGQAAASAMVMMMVIFAIVVPYLYSELRPRHDK

Sequences:

>Translated_290_residues
MEWLERNVPKLVLAPSFVAILVFVYGFIAWTAWISLTRSRLMPRYEFEGIGQYERLFAAPRWDVAMDNLFIFGGLFIVIS
MVIGLMLAIFLDQRIRAEGVLRTVYLYPMALSLIVTGTAWKWILNPGLGIQATVRSWGFENFTFDWLIRPEMAIYTIVLA
AVWQASGFVMALFLAGLRSVDTEIIRAAQVDGIPTHRIYSAIIIPTMAPIFLSAFIVLAHLAIKAFDLVIALTNGGPGYA
TDLPATYMYAMAFSRGDLGQAAASAMVMMMVIFAIVVPYLYSELRPRHDK
>Mature_290_residues
MEWLERNVPKLVLAPSFVAILVFVYGFIAWTAWISLTRSRLMPRYEFEGIGQYERLFAAPRWDVAMDNLFIFGGLFIVIS
MVIGLMLAIFLDQRIRAEGVLRTVYLYPMALSLIVTGTAWKWILNPGLGIQATVRSWGFENFTFDWLIRPEMAIYTIVLA
AVWQASGFVMALFLAGLRSVDTEIIRAAQVDGIPTHRIYSAIIIPTMAPIFLSAFIVLAHLAIKAFDLVIALTNGGPGYA
TDLPATYMYAMAFSRGDLGQAAASAMVMMMVIFAIVVPYLYSELRPRHDK

Specific function: Probably part of a binding-protein-dependent transport system PH1214/15/16. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1175

COG function: function code G; ABC-type sugar transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789861, Length=292, Percent_Identity=26.3698630136986, Blast_Score=85, Evalue=6e-18,
Organism=Escherichia coli, GI1787570, Length=251, Percent_Identity=26.2948207171315, Blast_Score=82, Evalue=4e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 32510; Mature: 32510

Theoretical pI: Translated: 8.68; Mature: 8.68

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.2 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEWLERNVPKLVLAPSFVAILVFVYGFIAWTAWISLTRSRLMPRYEFEGIGQYERLFAAP
CCCHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCC
RWDVAMDNLFIFGGLFIVISMVIGLMLAIFLDQRIRAEGVLRTVYLYPMALSLIVTGTAW
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
KWILNPGLGIQATVRSWGFENFTFDWLIRPEMAIYTIVLAAVWQASGFVMALFLAGLRSV
HEEECCCCCCCHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH
DTEIIRAAQVDGIPTHRIYSAIIIPTMAPIFLSAFIVLAHLAIKAFDLVIALTNGGPGYA
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCC
TDLPATYMYAMAFSRGDLGQAAASAMVMMMVIFAIVVPYLYSELRPRHDK
CCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MEWLERNVPKLVLAPSFVAILVFVYGFIAWTAWISLTRSRLMPRYEFEGIGQYERLFAAP
CCCHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCC
RWDVAMDNLFIFGGLFIVISMVIGLMLAIFLDQRIRAEGVLRTVYLYPMALSLIVTGTAW
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
KWILNPGLGIQATVRSWGFENFTFDWLIRPEMAIYTIVLAAVWQASGFVMALFLAGLRSV
HEEECCCCCCCHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH
DTEIIRAAQVDGIPTHRIYSAIIIPTMAPIFLSAFIVLAHLAIKAFDLVIALTNGGPGYA
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCC
TDLPATYMYAMAFSRGDLGQAAASAMVMMMVIFAIVVPYLYSELRPRHDK
CCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9679194 [H]