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The map label for this gene is 119386116

Identifier: 119386116

GI number: 119386116

Start: 548443

End: 549684

Strand: Direct

Name: 119386116

Synonym: Pden_3404

Alternate gene names: NA

Gene position: 548443-549684 (Clockwise)

Preceding gene: 119386113

Following gene: 119386117

Centisome position: 31.7

GC content: 67.31

Gene sequence:

>1242_bases
ATGACCATGAAACCCCTTCTGGCGGCGTCGACCGCCGTGATGCTGGCCGGGCCGGTGCTGGCCGAGCCGCAGGCCGAAGT
GCTGCACTGGTGGACCTCGGGCGGCGAGGCGCGCTCCGTCGCGGTGCTGCAAGAGCAGTTCGCAGCCGAGGGCGGCAGCT
GGACCGACATGCCCGTGGCGGGCGGGGGCGGCGACGCAGCAATGACCGCGCTGCGCGCCCGCGTGCTGTCGGGCAATGCG
CCGACCGCCGTGCAGTTGAAAGGCCCGGCCATTCAGGAATGGTACGAGGAAACCGGGCTGGCCGATATCGGTCCCGTGGC
CGAGGAAAACGGCTGGGAAGCCGTCCTGCCCGTCCGCATCGCCGAGCACATGCAATGCGAAGGCCAATGGTGCGCCGCGC
CGGTGAACGTCCATCGCGTGAACTGGATCTGGGGCAACAAGCAGATCCTGGACGAGCATGGCATAGCGATGCCGACCACA
TGGGAGGAGTTCAACGCCGCTGCCGAGACGCTGAAGGCGGCGGGCGTGACGCCTCTGGCCCATGGCGGGCAAAGCTGGCA
GGACGCGACCGTGTTCGAGACCGTCGTCCTGGGCCTGGGCGGGCCGGAATTCTACCAGCAGGCGCTGGTCGACCTGGACC
CTCAGGCGCTGAACTCGGATACCATGCGCCAGGTGTTCGACCAGATGCGGGTGATCCGCGGCTATGTGGACGACAATTTC
TCGGGGCGCGACTGGAACCTCGCGACCGCGATGGTGATGAACGGCGAGGCCGCCTTCCAGATCATGGGCGACTGGGCCAA
GGGCGAGTTTCTGGCCGCCGACAAGAAGCCGGGCGTGGATTTCGTCTGTGCCGAGACGCCCGGCGGCGGGTTCCTCTACA
ACGTCGACAGCTTCGCCTTCTTCAAGGTCGATGGCGATGACCGCCAGCAGGGGCAGGCGCTGCTGGCCCGCCTGATCATG
GGCGAGGGCTTCCAGAAGACCTTCAACCTCAACAAGGGCTCGATCCCCGCGCGCACCGACGTGGCACTGGACGAGTTCGA
CGATTGCGCCCGGCAATCGGCCGAGGCGATGAATGCGGGTGCGGAAAACGGTTCCCTGCTGCCCTCCTATGCGCATGGCA
TGGCGCTGCGCGGCGCGCCCGCCGGGGCGATCACCGATGTGGTGACGGCGCATTTCAACAGCGACATGACCTCGGACGAG
GCCGTGGAGCAACTGGCCAACGCCGTCGCGAGCGCGATGTAA

Upstream 100 bases:

>100_bases
GCATGGCTGTGTTGCGTTGCGCGAATGGCCGCGGCTTTGGCATGATCCTTTCACGGCGCGGTCCCTGCAAGGTCCGTGCG
ATCAAGATCTGGGAGGATCC

Downstream 100 bases:

>100_bases
GGCCGACAGCCCCGCATCCGGCCGCAAGCCCGGGTGCGGGGTTTCCTTTCTGGGGGAAATCGGGAAATGGAATGGCTTGA
ACGCAACGTGCCCAAGCTGG

Product: extracellular solute-binding protein

Products: NA

Alternate protein names: Immunogenic 39 kDa protein; P39 [H]

Number of amino acids: Translated: 413; Mature: 412

Protein sequence:

>413_residues
MTMKPLLAASTAVMLAGPVLAEPQAEVLHWWTSGGEARSVAVLQEQFAAEGGSWTDMPVAGGGGDAAMTALRARVLSGNA
PTAVQLKGPAIQEWYEETGLADIGPVAEENGWEAVLPVRIAEHMQCEGQWCAAPVNVHRVNWIWGNKQILDEHGIAMPTT
WEEFNAAAETLKAAGVTPLAHGGQSWQDATVFETVVLGLGGPEFYQQALVDLDPQALNSDTMRQVFDQMRVIRGYVDDNF
SGRDWNLATAMVMNGEAAFQIMGDWAKGEFLAADKKPGVDFVCAETPGGGFLYNVDSFAFFKVDGDDRQQGQALLARLIM
GEGFQKTFNLNKGSIPARTDVALDEFDDCARQSAEAMNAGAENGSLLPSYAHGMALRGAPAGAITDVVTAHFNSDMTSDE
AVEQLANAVASAM

Sequences:

>Translated_413_residues
MTMKPLLAASTAVMLAGPVLAEPQAEVLHWWTSGGEARSVAVLQEQFAAEGGSWTDMPVAGGGGDAAMTALRARVLSGNA
PTAVQLKGPAIQEWYEETGLADIGPVAEENGWEAVLPVRIAEHMQCEGQWCAAPVNVHRVNWIWGNKQILDEHGIAMPTT
WEEFNAAAETLKAAGVTPLAHGGQSWQDATVFETVVLGLGGPEFYQQALVDLDPQALNSDTMRQVFDQMRVIRGYVDDNF
SGRDWNLATAMVMNGEAAFQIMGDWAKGEFLAADKKPGVDFVCAETPGGGFLYNVDSFAFFKVDGDDRQQGQALLARLIM
GEGFQKTFNLNKGSIPARTDVALDEFDDCARQSAEAMNAGAENGSLLPSYAHGMALRGAPAGAITDVVTAHFNSDMTSDE
AVEQLANAVASAM
>Mature_412_residues
TMKPLLAASTAVMLAGPVLAEPQAEVLHWWTSGGEARSVAVLQEQFAAEGGSWTDMPVAGGGGDAAMTALRARVLSGNAP
TAVQLKGPAIQEWYEETGLADIGPVAEENGWEAVLPVRIAEHMQCEGQWCAAPVNVHRVNWIWGNKQILDEHGIAMPTTW
EEFNAAAETLKAAGVTPLAHGGQSWQDATVFETVVLGLGGPEFYQQALVDLDPQALNSDTMRQVFDQMRVIRGYVDDNFS
GRDWNLATAMVMNGEAAFQIMGDWAKGEFLAADKKPGVDFVCAETPGGGFLYNVDSFAFFKVDGDDRQQGQALLARLIMG
EGFQKTFNLNKGSIPARTDVALDEFDDCARQSAEAMNAGAENGSLLPSYAHGMALRGAPAGAITDVVTAHFNSDMTSDEA
VEQLANAVASAM

Specific function: Part of a binding-protein-dependent transport system for a sugar (Potential) [H]

COG id: COG1653

COG function: function code G; ABC-type sugar transport system, periplasmic component

Gene ontology:

Cell location: Periplasm (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006059 [H]

Pfam domain/function: PF01547 SBP_bac_1 [H]

EC number: NA

Molecular weight: Translated: 44072; Mature: 43941

Theoretical pI: Translated: 4.14; Mature: 4.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTMKPLLAASTAVMLAGPVLAEPQAEVLHWWTSGGEARSVAVLQEQFAAEGGSWTDMPVA
CCCCCHHHHHHHHHHCCCCCCCCCHHHEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCC
GGGGDAAMTALRARVLSGNAPTAVQLKGPAIQEWYEETGLADIGPVAEENGWEAVLPVRI
CCCCHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHCCCCCCCCCCCCCCCEEEEHHHH
AEHMQCEGQWCAAPVNVHRVNWIWGNKQILDEHGIAMPTTWEEFNAAAETLKAAGVTPLA
HHHHCCCCCEEECCCEEEEEEEEECCCHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCC
HGGQSWQDATVFETVVLGLGGPEFYQQALVDLDPQALNSDTMRQVFDQMRVIRGYVDDNF
CCCCCCCHHHHHHHHHHCCCCHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHHHHHCCCC
SGRDWNLATAMVMNGEAAFQIMGDWAKGEFLAADKKPGVDFVCAETPGGGFLYNVDSFAF
CCCCCCEEEEEEECCCEEEEEEECCCCCCEEECCCCCCCEEEEEECCCCCEEEECCCEEE
FKVDGDDRQQGQALLARLIMGEGFQKTFNLNKGSIPARTDVALDEFDDCARQSAEAMNAG
EEECCCCHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCC
AENGSLLPSYAHGMALRGAPAGAITDVVTAHFNSDMTSDEAVEQLANAVASAM
CCCCCCCCHHHCCEEECCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TMKPLLAASTAVMLAGPVLAEPQAEVLHWWTSGGEARSVAVLQEQFAAEGGSWTDMPVA
CCCCHHHHHHHHHHCCCCCCCCCHHHEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCC
GGGGDAAMTALRARVLSGNAPTAVQLKGPAIQEWYEETGLADIGPVAEENGWEAVLPVRI
CCCCHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHCCCCCCCCCCCCCCCEEEEHHHH
AEHMQCEGQWCAAPVNVHRVNWIWGNKQILDEHGIAMPTTWEEFNAAAETLKAAGVTPLA
HHHHCCCCCEEECCCEEEEEEEEECCCHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCC
HGGQSWQDATVFETVVLGLGGPEFYQQALVDLDPQALNSDTMRQVFDQMRVIRGYVDDNF
CCCCCCCHHHHHHHHHHCCCCHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHHHHHCCCC
SGRDWNLATAMVMNGEAAFQIMGDWAKGEFLAADKKPGVDFVCAETPGGGFLYNVDSFAF
CCCCCCEEEEEEECCCEEEEEEECCCCCCEEECCCCCCCEEEEEECCCCCEEEECCCEEE
FKVDGDDRQQGQALLARLIMGEGFQKTFNLNKGSIPARTDVALDEFDDCARQSAEAMNAG
EEECCCCHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCC
AENGSLLPSYAHGMALRGAPAGAITDVVTAHFNSDMTSDEAVEQLANAVASAM
CCCCCCCCHHHCCEEECCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9009303; 10235622 [H]