| Definition | Paracoccus denitrificans PD1222 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_008687 |
| Length | 1,730,097 |
Click here to switch to the map view.
The map label for this gene is 119386031
Identifier: 119386031
GI number: 119386031
Start: 477123
End: 477602
Strand: Direct
Name: 119386031
Synonym: Pden_3314
Alternate gene names: NA
Gene position: 477123-477602 (Clockwise)
Preceding gene: 119386027
Following gene: 119386032
Centisome position: 27.58
GC content: 62.5
Gene sequence:
>480_bases TTGACCATCTTCTCGACCATGCGAAGAGCGGGCATACCTGTTCTGGCCTGTCTTCTGGCGCTGCCGGCGCTGGCCGACGA GCCTGGAGGGCTGGTTACCGGCAGTTTTGGCGATCAGCCGCTGGAGCTGACTGTTGCCCCCGAATTGTCCGGCGCGACGA TCATCGGCAACTATGCCGATGCCTCCTTGCTTGCCTCACAGATGGAGGGCGATCAGGGGCCGGTCAATCTGGAACTGACG ATCAATGGCGAATTGCCCGCGCCCGGCGAAATGGCGCTGACGATCACCTTTGCGCGCGACATGGGACGGAATTGGACCGG CGATCAGGACAGCCTGACACTGACCCTGGAGGAATTCACGCCGGGCGACGGGATTGTCGCCTTGAAGGGCACGCTCACCG GGCAAGTCAGTGGCGGCCCCTCATCCGAAACCCGGCCCGTCACCTTCAGCTTCGACACCCGGCTTGAAGAGCTTGACTGA
Upstream 100 bases:
>100_bases AACTCTATCACAGGAGACTACATGTTCCCCGTTCAAACGAACGGGGCGGCCAGTCTTGAGCAGAACTAAACTCGGAATCA AACAGCAGGAGGATCTACGC
Downstream 100 bases:
>100_bases GATGGCTGGACCCGCCTTTGCCCGAACTGCGGCCCTGCTGCTGATCGCTACGGCAACCTCAGCACTGGCCGGTGAACCGT CCAACCCGGTCTGCCACGCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 159; Mature: 158
Protein sequence:
>159_residues MTIFSTMRRAGIPVLACLLALPALADEPGGLVTGSFGDQPLELTVAPELSGATIIGNYADASLLASQMEGDQGPVNLELT INGELPAPGEMALTITFARDMGRNWTGDQDSLTLTLEEFTPGDGIVALKGTLTGQVSGGPSSETRPVTFSFDTRLEELD
Sequences:
>Translated_159_residues MTIFSTMRRAGIPVLACLLALPALADEPGGLVTGSFGDQPLELTVAPELSGATIIGNYADASLLASQMEGDQGPVNLELT INGELPAPGEMALTITFARDMGRNWTGDQDSLTLTLEEFTPGDGIVALKGTLTGQVSGGPSSETRPVTFSFDTRLEELD >Mature_158_residues TIFSTMRRAGIPVLACLLALPALADEPGGLVTGSFGDQPLELTVAPELSGATIIGNYADASLLASQMEGDQGPVNLELTI NGELPAPGEMALTITFARDMGRNWTGDQDSLTLTLEEFTPGDGIVALKGTLTGQVSGGPSSETRPVTFSFDTRLEELD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16585; Mature: 16454
Theoretical pI: Translated: 3.71; Mature: 3.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIFSTMRRAGIPVLACLLALPALADEPGGLVTGSFGDQPLELTVAPELSGATIIGNYAD CCHHHHHHHCCCHHHHHHHHHHHCCCCCCCEEECCCCCCCEEEEECCCCCCCEEEECCCC ASLLASQMEGDQGPVNLELTINGELPAPGEMALTITFARDMGRNWTGDQDSLTLTLEEFT HHHHHHHHCCCCCCEEEEEEECCCCCCCCCEEEEEEEEHHCCCCCCCCCCCEEEEEECCC PGDGIVALKGTLTGQVSGGPSSETRPVTFSFDTRLEELD CCCCEEEEEEEEEEEECCCCCCCCCCEEEEECCCCCCCC >Mature Secondary Structure TIFSTMRRAGIPVLACLLALPALADEPGGLVTGSFGDQPLELTVAPELSGATIIGNYAD CHHHHHHHCCCHHHHHHHHHHHCCCCCCCEEECCCCCCCEEEEECCCCCCCEEEECCCC ASLLASQMEGDQGPVNLELTINGELPAPGEMALTITFARDMGRNWTGDQDSLTLTLEEFT HHHHHHHHCCCCCCEEEEEEECCCCCCCCCEEEEEEEEHHCCCCCCCCCCCEEEEEECCC PGDGIVALKGTLTGQVSGGPSSETRPVTFSFDTRLEELD CCCCEEEEEEEEEEEECCCCCCCCCCEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA