| Definition | Paracoccus denitrificans PD1222 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_008687 |
| Length | 1,730,097 |
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The map label for this gene is 119386032
Identifier: 119386032
GI number: 119386032
Start: 477604
End: 478176
Strand: Direct
Name: 119386032
Synonym: Pden_3315
Alternate gene names: NA
Gene position: 477604-478176 (Clockwise)
Preceding gene: 119386031
Following gene: 119386033
Centisome position: 27.61
GC content: 60.21
Gene sequence:
>573_bases ATGGCTGGACCCGCCTTTGCCCGAACTGCGGCCCTGCTGCTGATCGCTACGGCAACCTCAGCACTGGCCGGTGAACCGTC CAACCCGGTCTGCCACGCAGACGTCCATCGCGCCGGTAATTTTGACCTGCGACAGATTGGTCCGCTGATCGCGGGAACGT GGACCGAAGCCGCCATCGGAACGAGTGTGGCAATAGGCGTTCAGGAGAGCACCTTCGAGATCATTTATGATCGGAACCGC AACCGATTGTATCTGGGTTCGGACGGCATTCAGACCGAACTGGTGCCGGTTCGAGGTGGCAACAAGCCGCTGCGCTTTGA CTTTGTGCGTGGCGAGGCAATGGACCCGCAGTTTTATATGTTGACTTCAACGGGTTCCGAGCCCGGCGCGGAGCCTTGGG AATGGGCGTTGGTTCAGGATTGCCAGATTGCCTCGGCGCCGCAATTCGAATGGCAATTCGGCACCGGTGCGCGGCGCTCG GACGGGATCATCAGTTTCTTCTCGGCCAATGAGGCGATGGGAACAAAACGCAATTCGGCGCGGGGCGTCCGCGAACAGCT GATCAGCCGATAG
Upstream 100 bases:
>100_bases TTGAAGGGCACGCTCACCGGGCAAGTCAGTGGCGGCCCCTCATCCGAAACCCGGCCCGTCACCTTCAGCTTCGACACCCG GCTTGAAGAGCTTGACTGAG
Downstream 100 bases:
>100_bases GAATGCCAATGAAGGTGCTTGTCCCGCTTGTCCTGGCCCTCGGAATCGCAACCCCCGCTGGTGCATTGGACGCCATCGGC GAGATCGGGGCAAACTTGGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 190; Mature: 189
Protein sequence:
>190_residues MAGPAFARTAALLLIATATSALAGEPSNPVCHADVHRAGNFDLRQIGPLIAGTWTEAAIGTSVAIGVQESTFEIIYDRNR NRLYLGSDGIQTELVPVRGGNKPLRFDFVRGEAMDPQFYMLTSTGSEPGAEPWEWALVQDCQIASAPQFEWQFGTGARRS DGIISFFSANEAMGTKRNSARGVREQLISR
Sequences:
>Translated_190_residues MAGPAFARTAALLLIATATSALAGEPSNPVCHADVHRAGNFDLRQIGPLIAGTWTEAAIGTSVAIGVQESTFEIIYDRNR NRLYLGSDGIQTELVPVRGGNKPLRFDFVRGEAMDPQFYMLTSTGSEPGAEPWEWALVQDCQIASAPQFEWQFGTGARRS DGIISFFSANEAMGTKRNSARGVREQLISR >Mature_189_residues AGPAFARTAALLLIATATSALAGEPSNPVCHADVHRAGNFDLRQIGPLIAGTWTEAAIGTSVAIGVQESTFEIIYDRNRN RLYLGSDGIQTELVPVRGGNKPLRFDFVRGEAMDPQFYMLTSTGSEPGAEPWEWALVQDCQIASAPQFEWQFGTGARRSD GIISFFSANEAMGTKRNSARGVREQLISR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20578; Mature: 20447
Theoretical pI: Translated: 5.27; Mature: 5.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGPAFARTAALLLIATATSALAGEPSNPVCHADVHRAGNFDLRQIGPLIAGTWTEAAIG CCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCHHHHCHHHCCCCCHHHCC TSVAIGVQESTFEIIYDRNRNRLYLGSDGIQTELVPVRGGNKPLRFDFVRGEAMDPQFYM CEEEEEECCCEEEEEEECCCCEEEECCCCCEEEEEEECCCCCCEEEEEECCCCCCCEEEE LTSTGSEPGAEPWEWALVQDCQIASAPQFEWQFGTGARRSDGIISFFSANEAMGTKRNSA EEECCCCCCCCCCEEEEEECCCCCCCCCEEEEECCCCCCCCCEEEEEECCCCCCCCCCCH RGVREQLISR HHHHHHHHCC >Mature Secondary Structure AGPAFARTAALLLIATATSALAGEPSNPVCHADVHRAGNFDLRQIGPLIAGTWTEAAIG CCHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCHHHHCHHHCCCCCHHHCC TSVAIGVQESTFEIIYDRNRNRLYLGSDGIQTELVPVRGGNKPLRFDFVRGEAMDPQFYM CEEEEEECCCEEEEEEECCCCEEEECCCCCEEEEEEECCCCCCEEEEEECCCCCCCEEEE LTSTGSEPGAEPWEWALVQDCQIASAPQFEWQFGTGARRSDGIISFFSANEAMGTKRNSA EEECCCCCCCCCCEEEEEECCCCCCCCCEEEEECCCCCCCCCEEEEEECCCCCCCCCCCH RGVREQLISR HHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA