| Definition | Paracoccus denitrificans PD1222 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_008687 |
| Length | 1,730,097 |
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The map label for this gene is 119386011
Identifier: 119386011
GI number: 119386011
Start: 457734
End: 458207
Strand: Direct
Name: 119386011
Synonym: Pden_3292
Alternate gene names: NA
Gene position: 457734-458207 (Clockwise)
Preceding gene: 119386010
Following gene: 119386013
Centisome position: 26.46
GC content: 60.76
Gene sequence:
>474_bases ATGCGGACTGTAAAATCTTTCACCACCGTCGCTGTCGCTCTCGCCCTCGCGCTGGGGTCGGCTGGCATTGCCGCCGCGCA ATCCCATGATCATGACAGCCATGGCGCGGGGGCTATCGAGATCACGCTGAACGATGGCGCCAAATGGCAGGGCGATCAGA ACATGATCACCGGCATGACCGCGATTCACGGAACCATGGCCGCGAACCTGGACGCGATCCACAACGGCACCCTGCCGGCA GATGCCGCGAATGGGGTCGCTGCCGATATCCAGAAGCAGGTCGATTTCATGGTCGAGAACTGTGTGCTGGAACCCGAGGT AGACGAGCAGTTCCATATCGTCCTTGGCGAGGTGATGACAGGCATCTCGGCATTGGAGGCCGGCGAGGTCGAGACTGGCG CGGTGACGATCGTTCAGGCGTTGAACGCCTATGGCGAGCATTTCGAGCATCCGGGCTGGCAGATGATCGACTGA
Upstream 100 bases:
>100_bases TTTTCGTGCGAAAACGGACAGTCTATGTCTATCCCAAGTCCGGCGGCGTCTGTCGATGCCCGTCGCGGCCAGAACCACTT GGCAGATACAGGAGATCACT
Downstream 100 bases:
>100_bases CGCCACGGGCGCAGGCATGGGCCGGCGCGGGCGTCACGCCTGCGCCGGCCTTGTCCTGCACGGGCAGCGCCCCTCCAGCA GGTCGGCATCGGCCGCCAGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 157; Mature: 157
Protein sequence:
>157_residues MRTVKSFTTVAVALALALGSAGIAAAQSHDHDSHGAGAIEITLNDGAKWQGDQNMITGMTAIHGTMAANLDAIHNGTLPA DAANGVAADIQKQVDFMVENCVLEPEVDEQFHIVLGEVMTGISALEAGEVETGAVTIVQALNAYGEHFEHPGWQMID
Sequences:
>Translated_157_residues MRTVKSFTTVAVALALALGSAGIAAAQSHDHDSHGAGAIEITLNDGAKWQGDQNMITGMTAIHGTMAANLDAIHNGTLPA DAANGVAADIQKQVDFMVENCVLEPEVDEQFHIVLGEVMTGISALEAGEVETGAVTIVQALNAYGEHFEHPGWQMID >Mature_157_residues MRTVKSFTTVAVALALALGSAGIAAAQSHDHDSHGAGAIEITLNDGAKWQGDQNMITGMTAIHGTMAANLDAIHNGTLPA DAANGVAADIQKQVDFMVENCVLEPEVDEQFHIVLGEVMTGISALEAGEVETGAVTIVQALNAYGEHFEHPGWQMID
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16391; Mature: 16391
Theoretical pI: Translated: 4.15; Mature: 4.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTVKSFTTVAVALALALGSAGIAAAQSHDHDSHGAGAIEITLNDGAKWQGDQNMITGMT CCCHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHH AIHGTMAANLDAIHNGTLPADAANGVAADIQKQVDFMVENCVLEPEVDEQFHIVLGEVMT HHHHHHHHCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH GISALEAGEVETGAVTIVQALNAYGEHFEHPGWQMID HHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCEECC >Mature Secondary Structure MRTVKSFTTVAVALALALGSAGIAAAQSHDHDSHGAGAIEITLNDGAKWQGDQNMITGMT CCCHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHH AIHGTMAANLDAIHNGTLPADAANGVAADIQKQVDFMVENCVLEPEVDEQFHIVLGEVMT HHHHHHHHCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH GISALEAGEVETGAVTIVQALNAYGEHFEHPGWQMID HHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA