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The map label for this gene is pcaC [H]

Identifier: 119385977

GI number: 119385977

Start: 420270

End: 420716

Strand: Direct

Name: pcaC [H]

Synonym: Pden_3257

Alternate gene names: 119385977

Gene position: 420270-420716 (Clockwise)

Preceding gene: 119385976

Following gene: 119385978

Centisome position: 24.29

GC content: 62.64

Gene sequence:

>447_bases
GTGCCGAGGCAGTCGCCCGCATTTACGCGGAAAGCTGACCGGCTTTCTGGTAATCCTACAGGAGAACACCCTATGGACAG
AATCGAAACAGGCCGGCAGGTCCTCCGGGAGTTGATGGGCGAGGATTTCCTCGTCCAGCGCGCCGGTCGCCGCAACGATT
TCAACGCGGCGGTGCAGGACTATACCGACGACGTGTGCTTCGGCACCGTGTGGTCGCCCCCCGGCATCGACCGCAAGATG
CGCTCGATCCTCAATATCGCAATGTTGACCGCGCTCTGCCGGCCCAATCAGCTCCGCTCGCATGTCGAGGGCGCGATCAA
CAACGGCTGCACCGTGGAGGAACTGCGCGAGATCTTGCTGCACACCGCCGTCTACGCCGGCCTGCCGGCGGCGGTCGAGG
CATTCAAGGTCGCCGAGGAAGTGCTGGAGAAGAAGAACTTGCTCTGA

Upstream 100 bases:

>100_bases
GACATCCGCGAGGCGCTGAACCGGGGCTGGGGCGAGCGCGACAGCCAGTCCTATCTGGCGCTGCAACAGGAACGCGCCGG
GATCGAACCCTTCCGACTGA

Downstream 100 bases:

>100_bases
CATCTCGTCGCGCGCCGCCCGGGTGGCGCGCGATGCACCCCTGCAGCTCGCGAGGGGCCGGGCACCGAATGGGAACCAAG
ACCCGGATGACCATTTCCCG

Product: carboxymuconolactone decarboxylase

Products: NA

Alternate protein names: CMD [H]

Number of amino acids: Translated: 148; Mature: 147

Protein sequence:

>148_residues
MPRQSPAFTRKADRLSGNPTGEHPMDRIETGRQVLRELMGEDFLVQRAGRRNDFNAAVQDYTDDVCFGTVWSPPGIDRKM
RSILNIAMLTALCRPNQLRSHVEGAINNGCTVEELREILLHTAVYAGLPAAVEAFKVAEEVLEKKNLL

Sequences:

>Translated_148_residues
MPRQSPAFTRKADRLSGNPTGEHPMDRIETGRQVLRELMGEDFLVQRAGRRNDFNAAVQDYTDDVCFGTVWSPPGIDRKM
RSILNIAMLTALCRPNQLRSHVEGAINNGCTVEELREILLHTAVYAGLPAAVEAFKVAEEVLEKKNLL
>Mature_147_residues
PRQSPAFTRKADRLSGNPTGEHPMDRIETGRQVLRELMGEDFLVQRAGRRNDFNAAVQDYTDDVCFGTVWSPPGIDRKMR
SILNIAMLTALCRPNQLRSHVEGAINNGCTVEELREILLHTAVYAGLPAAVEAFKVAEEVLEKKNLL

Specific function: Unknown

COG id: COG0599

COG function: function code S; Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003779
- InterPro:   IPR012788 [H]

Pfam domain/function: PF02627 CMD [H]

EC number: =4.1.1.44 [H]

Molecular weight: Translated: 16548; Mature: 16417

Theoretical pI: Translated: 6.78; Mature: 6.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRQSPAFTRKADRLSGNPTGEHPMDRIETGRQVLRELMGEDFLVQRAGRRNDFNAAVQD
CCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCHHHHHHH
YTDDVCFGTVWSPPGIDRKMRSILNIAMLTALCRPNQLRSHVEGAINNGCTVEELREILL
HCCCHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHH
HTAVYAGLPAAVEAFKVAEEVLEKKNLL
HHHHHHCCHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
PRQSPAFTRKADRLSGNPTGEHPMDRIETGRQVLRELMGEDFLVQRAGRRNDFNAAVQD
CCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCHHHHHHH
YTDDVCFGTVWSPPGIDRKMRSILNIAMLTALCRPNQLRSHVEGAINNGCTVEELREILL
HCCCHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHH
HTAVYAGLPAAVEAFKVAEEVLEKKNLL
HHHHHHCCHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2298704 [H]