| Definition | Paracoccus denitrificans PD1222 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_008687 |
| Length | 1,730,097 |
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The map label for this gene is yccK [H]
Identifier: 119385966
GI number: 119385966
Start: 409473
End: 410462
Strand: Direct
Name: yccK [H]
Synonym: Pden_3244
Alternate gene names: 119385966
Gene position: 409473-410462 (Clockwise)
Preceding gene: 119385965
Following gene: 119385967
Centisome position: 23.67
GC content: 65.86
Gene sequence:
>990_bases ATGAAAAGCAGAAATCTAGGAAATCTTGAGGTCTCGGCCCTCGGCCTCGGCTGCATGGGGATGACGGGCGTTTACGGTCC GGGCGTCGAAAAGGCCGACATGATCCGGCTTATCCACGACGCGCATGACCGCGGCGTGACCTTCTTCGACACGGCCGAAG CCTATGGCCCCTTCGCCAACGAGGAATTGCTTGGCGAGGCGCTTCAGCCGATCCGCGACAAGGTGGTGATCGCCACCAAG TTCGGCTTCGACATCGACCTGGAGACCGGCGCCCGCAACGGCGGCACCAACAGCCGTCCCGAACGCATCAAGGCGGTGGC GGACGCGGCGCTCAGGCGGCTGCGCACCGACCGCATCGACCTGTTCTACCAGCACCGCGTCGATCCGAACGTGCCGATCG AGGATGTCGCCGGAGCGGTGAAAGACCTGATCGCCGCGGGCAAAGTCAAGCATTTCGGCCTGTCGGAAGCCGGGGTCGGC ACCATCCGTCGCGCCCATGCCGTCCAGCCCGTGACTGCGGTGCAGAGCGAGTATTCGCTGTTCTGGCGTGGGCCGGAAGT GGAGCTTCTGCCGGTGCTGGAGGAACTCGGTATCGGCTTCGTGCCCTTCAGCCCGCTGGGCGCGGGTTTCCTGACCGGCA AGATTGACGAGACCACCACCTTCGAGCAGGGCGATTTCCGCAACCTTGTTCCGCGCTTCTCGCCCGAGGCCCGCAAGGCC AACATGGCGCTGGTCGGCGTGGTCAAGAGCGTGGCGGATCGCAAGGGCGCGACGCCCGCCCAGGTCACGCTCGCCTGGCT GCTGGCACAGAAGCCCTGGATCGTGCCGATCCCCGGCACCACCAAGCTGCACCGTCTTGAGGAGAACCTGGGCGCGGTCG AGCTGGAGCTGACGGCCACCGATCTCGCGGAGATCGACGCCGAGGCGTCGAAGATCGAAGTCCAGGGCGAGCGCCTGCCC GAGGCCGTGCTGAAGATGACCGGCCTGTGA
Upstream 100 bases:
>100_bases ATGGCCGTCGCGGCGATCGAGCTGCGCGGCCAACGTCTCCCCGACGCCGTTCTGGCCTTCTCGAATGTCGAGGCTCCGGC AAGGAATTAAGGAAGTAGAC
Downstream 100 bases:
>100_bases GCGCGTTGAAATTGAAAGGATCAATCAGATGAACGACACCAAGATCAGCGACTTCACCCCTGTTTATCGGGGCGCGATCA CCGCGAATGAATCGGGCAAG
Product: aldo/keto reductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 329; Mature: 329
Protein sequence:
>329_residues MKSRNLGNLEVSALGLGCMGMTGVYGPGVEKADMIRLIHDAHDRGVTFFDTAEAYGPFANEELLGEALQPIRDKVVIATK FGFDIDLETGARNGGTNSRPERIKAVADAALRRLRTDRIDLFYQHRVDPNVPIEDVAGAVKDLIAAGKVKHFGLSEAGVG TIRRAHAVQPVTAVQSEYSLFWRGPEVELLPVLEELGIGFVPFSPLGAGFLTGKIDETTTFEQGDFRNLVPRFSPEARKA NMALVGVVKSVADRKGATPAQVTLAWLLAQKPWIVPIPGTTKLHRLEENLGAVELELTATDLAEIDAEASKIEVQGERLP EAVLKMTGL
Sequences:
>Translated_329_residues MKSRNLGNLEVSALGLGCMGMTGVYGPGVEKADMIRLIHDAHDRGVTFFDTAEAYGPFANEELLGEALQPIRDKVVIATK FGFDIDLETGARNGGTNSRPERIKAVADAALRRLRTDRIDLFYQHRVDPNVPIEDVAGAVKDLIAAGKVKHFGLSEAGVG TIRRAHAVQPVTAVQSEYSLFWRGPEVELLPVLEELGIGFVPFSPLGAGFLTGKIDETTTFEQGDFRNLVPRFSPEARKA NMALVGVVKSVADRKGATPAQVTLAWLLAQKPWIVPIPGTTKLHRLEENLGAVELELTATDLAEIDAEASKIEVQGERLP EAVLKMTGL >Mature_329_residues MKSRNLGNLEVSALGLGCMGMTGVYGPGVEKADMIRLIHDAHDRGVTFFDTAEAYGPFANEELLGEALQPIRDKVVIATK FGFDIDLETGARNGGTNSRPERIKAVADAALRRLRTDRIDLFYQHRVDPNVPIEDVAGAVKDLIAAGKVKHFGLSEAGVG TIRRAHAVQPVTAVQSEYSLFWRGPEVELLPVLEELGIGFVPFSPLGAGFLTGKIDETTTFEQGDFRNLVPRFSPEARKA NMALVGVVKSVADRKGATPAQVTLAWLLAQKPWIVPIPGTTKLHRLEENLGAVELELTATDLAEIDAEASKIEVQGERLP EAVLKMTGL
Specific function: Unknown
COG id: COG0667
COG function: function code C; Predicted oxidoreductases (related to aryl-alcohol dehydrogenases)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aldo/keto reductase 2 family [H]
Homologues:
Organism=Homo sapiens, GI27436964, Length=327, Percent_Identity=30.8868501529052, Blast_Score=119, Evalue=5e-27, Organism=Homo sapiens, GI27436969, Length=327, Percent_Identity=29.0519877675841, Blast_Score=118, Evalue=8e-27, Organism=Homo sapiens, GI4504825, Length=324, Percent_Identity=29.0123456790123, Blast_Score=117, Evalue=1e-26, Organism=Homo sapiens, GI27436966, Length=327, Percent_Identity=30.5810397553517, Blast_Score=116, Evalue=2e-26, Organism=Homo sapiens, GI27436971, Length=327, Percent_Identity=30.8868501529052, Blast_Score=116, Evalue=3e-26, Organism=Homo sapiens, GI27436962, Length=328, Percent_Identity=31.0975609756098, Blast_Score=116, Evalue=4e-26, Organism=Homo sapiens, GI223718702, Length=282, Percent_Identity=28.7234042553192, Blast_Score=82, Evalue=5e-16, Organism=Homo sapiens, GI41152114, Length=224, Percent_Identity=28.5714285714286, Blast_Score=80, Evalue=2e-15, Organism=Homo sapiens, GI41327764, Length=281, Percent_Identity=28.1138790035587, Blast_Score=79, Evalue=5e-15, Organism=Escherichia coli, GI87081735, Length=321, Percent_Identity=32.7102803738318, Blast_Score=145, Evalue=3e-36, Organism=Escherichia coli, GI1789375, Length=297, Percent_Identity=30.6397306397306, Blast_Score=123, Evalue=2e-29, Organism=Escherichia coli, GI1787674, Length=315, Percent_Identity=30.4761904761905, Blast_Score=115, Evalue=6e-27, Organism=Escherichia coli, GI1788070, Length=315, Percent_Identity=28.8888888888889, Blast_Score=111, Evalue=5e-26, Organism=Escherichia coli, GI1789199, Length=339, Percent_Identity=28.6135693215339, Blast_Score=98, Evalue=6e-22, Organism=Escherichia coli, GI1788081, Length=265, Percent_Identity=26.0377358490566, Blast_Score=92, Evalue=6e-20, Organism=Escherichia coli, GI48994888, Length=299, Percent_Identity=26.4214046822742, Blast_Score=74, Evalue=2e-14, Organism=Saccharomyces cerevisiae, GI6325169, Length=335, Percent_Identity=26.865671641791, Blast_Score=109, Evalue=7e-25, Organism=Saccharomyces cerevisiae, GI6323998, Length=318, Percent_Identity=25.7861635220126, Blast_Score=92, Evalue=1e-19, Organism=Saccharomyces cerevisiae, GI6325384, Length=321, Percent_Identity=27.7258566978193, Blast_Score=92, Evalue=2e-19, Organism=Saccharomyces cerevisiae, GI6319958, Length=292, Percent_Identity=24.6575342465753, Blast_Score=90, Evalue=5e-19, Organism=Saccharomyces cerevisiae, GI6319951, Length=317, Percent_Identity=24.2902208201893, Blast_Score=86, Evalue=6e-18, Organism=Saccharomyces cerevisiae, GI6322615, Length=254, Percent_Identity=24.8031496062992, Blast_Score=84, Evalue=5e-17, Organism=Drosophila melanogaster, GI24640980, Length=341, Percent_Identity=24.3401759530792, Blast_Score=84, Evalue=1e-16, Organism=Drosophila melanogaster, GI45549126, Length=341, Percent_Identity=24.0469208211144, Blast_Score=83, Evalue=2e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001395 - InterPro: IPR020471 - InterPro: IPR023210 [H]
Pfam domain/function: PF00248 Aldo_ket_red [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 35615; Mature: 35615
Theoretical pI: Translated: 5.29; Mature: 5.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSRNLGNLEVSALGLGCMGMTGVYGPGVEKADMIRLIHDAHDRGVTFFDTAEAYGPFAN CCCCCCCCEEEEEEEECHHCCCCCCCCCCCHHHHHHHHHHHHHCCEEEEECHHHHCCCCC EELLGEALQPIRDKVVIATKFGFDIDLETGARNGGTNSRPERIKAVADAALRRLRTDRID HHHHHHHHHHHHHCEEEEEECCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH LFYQHRVDPNVPIEDVAGAVKDLIAAGKVKHFGLSEAGVGTIRRAHAVQPVTAVQSEYSL EEEEECCCCCCCHHHHHHHHHHHHHHCCHHCCCCCCCCCHHHHHHHHCCCHHHHHHCCEE FWRGPEVELLPVLEELGIGFVPFSPLGAGFLTGKIDETTTFEQGDFRNLVPRFSPEARKA EECCCCCEEHHHHHHCCCCCCCCCCCCCCEEECCCCCCCCCCCCCHHHCCCCCCCCHHHC NMALVGVVKSVADRKGATPAQVTLAWLLAQKPWIVPIPGTTKLHRLEENLGAVELELTAT CHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCEEEEEEEHH DLAEIDAEASKIEVQGERLPEAVLKMTGL HHHHHCCCCCEEEECCHHHHHHHHHHCCC >Mature Secondary Structure MKSRNLGNLEVSALGLGCMGMTGVYGPGVEKADMIRLIHDAHDRGVTFFDTAEAYGPFAN CCCCCCCCEEEEEEEECHHCCCCCCCCCCCHHHHHHHHHHHHHCCEEEEECHHHHCCCCC EELLGEALQPIRDKVVIATKFGFDIDLETGARNGGTNSRPERIKAVADAALRRLRTDRID HHHHHHHHHHHHHCEEEEEECCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH LFYQHRVDPNVPIEDVAGAVKDLIAAGKVKHFGLSEAGVGTIRRAHAVQPVTAVQSEYSL EEEEECCCCCCCHHHHHHHHHHHHHHCCHHCCCCCCCCCHHHHHHHHCCCHHHHHHCCEE FWRGPEVELLPVLEELGIGFVPFSPLGAGFLTGKIDETTTFEQGDFRNLVPRFSPEARKA EECCCCCEEHHHHHHCCCCCCCCCCCCCCEEECCCCCCCCCCCCCHHHCCCCCCCCHHHC NMALVGVVKSVADRKGATPAQVTLAWLLAQKPWIVPIPGTTKLHRLEENLGAVELELTAT CHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCEEEEEEEHH DLAEIDAEASKIEVQGERLPEAVLKMTGL HHHHHCCCCCEEEECCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9274031; 9384377; 9106203 [H]