Click here to switch to the map view.

The map label for this gene is 119385958

Identifier: 119385958

GI number: 119385958

Start: 402410

End: 403183

Strand: Direct

Name: 119385958

Synonym: Pden_3236

Alternate gene names: NA

Gene position: 402410-403183 (Clockwise)

Preceding gene: 119385957

Following gene: 119385960

Centisome position: 23.26

GC content: 67.18

Gene sequence:

>774_bases
ATGAGCAAGGATTCAGGTGTGCTTCTGGTCGTGGGCGCGACCGGCAGCATCGGGCAGCGTGTCGTCACGGCGGGTCTGGC
GCATGGCTATACCGTGCGCGCGCTGCTGCGCGATGCGTCTCGCGCACAGGACTTCCCGGCAAATGTCCAGACCGTCGTGG
GTGACATGACCCGGCCCGAGACCCTTGCGGCTGCGGTCGATGGGGTCGGTGCGATCGTGTTCACCCATGGCAGCTACGGC
AATCCGGCGGCTGCGGAGGCGGTGGATTATGGCGCCGTGCGCAATGTGCTGGCGGCTCTTGGCAACCGGACGGCACGGAT
CGCGCTGATGTCCACCATCGGCGCGACGGATCGCCGGGGTTCGCATGACTGGAAGCGGCGGGGCGAACGGCTGGTGCGCG
CCAGCGGGTTTCCCTATACCATCGTTCGCCCGGCCTGGTTCGACCACAACCGGCCCGACCAGTTGAAGCTCCTGATGTTG
CAGGGCGACAAGGATCTGGCCGGCAATCCCTCGGACGGGGTGATCGCCCGGCGCCAGATTGCCGAGGTGCTGGTGCGCAG
CCTGTCCTCGGAGGCCGCCCTGCGCAAGACTTTCGAGCTTCATGCCGAAACCGGGCCGGAGGAGGAGGATTTCGACATGG
TGTTTGCGCCGCTGGCCGCCGATCCTGCCGATGCGCTGGACGGTGCGAAGGACAAGGCCAACATGCCGCTCGCAGACGAA
CCCGCGCAGATTCGTGCGGAACTTGAAGCGGTGCGGGGTCGCGCGGCGGGCTGA

Upstream 100 bases:

>100_bases
TTTCGGACAGGGCCACGTCATCGGCGTGGCCTGTTCATCGGACGCAGCTTGTGGCCGGGTTCGATGATCGACCCGGCCGC
AATCCTTTCAGGGGAGTGAA

Downstream 100 bases:

>100_bases
CCTATTCCCGATACCGCAGCCGGTCCAGCAGCAGCGCAAACGCAGGGGACGGGTGTTTCCGGCTGGGATAATAGAGGTGA
TAGCCTGGAAATCGCGGGCA

Product: NmrA family protein

Products: NA

Alternate protein names: NmrA Family Protein; 3-Beta Hydroxysteroid Dehydrogenase/Isomerase Family; Dihydrodipicolinate Reductase; NmrA-Like Family; Nucleoside-Diphosphate-Sugar Epimerases; Nucleoside-Diphosphate-Sugar Epimerase-Like; Nucleoside-Diphosphate-Sugar Epimerase; 3-Deoxy-7-Phosphoheptulonate Synthase Phe-Sensitive; Male Sterility-Like; NAD-Dependent Epimerase/Dehydratase Family Protein; NmrA-Like; NAD Dependent Epimerase/Dehydratase Family Protein

Number of amino acids: Translated: 257; Mature: 256

Protein sequence:

>257_residues
MSKDSGVLLVVGATGSIGQRVVTAGLAHGYTVRALLRDASRAQDFPANVQTVVGDMTRPETLAAAVDGVGAIVFTHGSYG
NPAAAEAVDYGAVRNVLAALGNRTARIALMSTIGATDRRGSHDWKRRGERLVRASGFPYTIVRPAWFDHNRPDQLKLLML
QGDKDLAGNPSDGVIARRQIAEVLVRSLSSEAALRKTFELHAETGPEEEDFDMVFAPLAADPADALDGAKDKANMPLADE
PAQIRAELEAVRGRAAG

Sequences:

>Translated_257_residues
MSKDSGVLLVVGATGSIGQRVVTAGLAHGYTVRALLRDASRAQDFPANVQTVVGDMTRPETLAAAVDGVGAIVFTHGSYG
NPAAAEAVDYGAVRNVLAALGNRTARIALMSTIGATDRRGSHDWKRRGERLVRASGFPYTIVRPAWFDHNRPDQLKLLML
QGDKDLAGNPSDGVIARRQIAEVLVRSLSSEAALRKTFELHAETGPEEEDFDMVFAPLAADPADALDGAKDKANMPLADE
PAQIRAELEAVRGRAAG
>Mature_256_residues
SKDSGVLLVVGATGSIGQRVVTAGLAHGYTVRALLRDASRAQDFPANVQTVVGDMTRPETLAAAVDGVGAIVFTHGSYGN
PAAAEAVDYGAVRNVLAALGNRTARIALMSTIGATDRRGSHDWKRRGERLVRASGFPYTIVRPAWFDHNRPDQLKLLMLQ
GDKDLAGNPSDGVIARRQIAEVLVRSLSSEAALRKTFELHAETGPEEEDFDMVFAPLAADPADALDGAKDKANMPLADEP
AQIRAELEAVRGRAAG

Specific function: Unknown

COG id: COG0702

COG function: function code MG; Predicted nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27280; Mature: 27149

Theoretical pI: Translated: 6.37; Mature: 6.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKDSGVLLVVGATGSIGQRVVTAGLAHGYTVRALLRDASRAQDFPANVQTVVGDMTRPE
CCCCCCEEEEEECCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCH
TLAAAVDGVGAIVFTHGSYGNPAAAEAVDYGAVRNVLAALGNRTARIALMSTIGATDRRG
HHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHCCCCCCC
SHDWKRRGERLVRASGFPYTIVRPAWFDHNRPDQLKLLMLQGDKDLAGNPSDGVIARRQI
CCHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHH
AEVLVRSLSSEAALRKTFELHAETGPEEEDFDMVFAPLAADPADALDGAKDKANMPLADE
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCHHHHCCCCCCCCCCCCCC
PAQIRAELEAVRGRAAG
HHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SKDSGVLLVVGATGSIGQRVVTAGLAHGYTVRALLRDASRAQDFPANVQTVVGDMTRPE
CCCCCEEEEEECCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCH
TLAAAVDGVGAIVFTHGSYGNPAAAEAVDYGAVRNVLAALGNRTARIALMSTIGATDRRG
HHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHCCCCCCC
SHDWKRRGERLVRASGFPYTIVRPAWFDHNRPDQLKLLMLQGDKDLAGNPSDGVIARRQI
CCHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHH
AEVLVRSLSSEAALRKTFELHAETGPEEEDFDMVFAPLAADPADALDGAKDKANMPLADE
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCHHHHCCCCCCCCCCCCCC
PAQIRAELEAVRGRAAG
HHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA