| Definition | Paracoccus denitrificans PD1222 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_008687 |
| Length | 1,730,097 |
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The map label for this gene is 119385960
Identifier: 119385960
GI number: 119385960
Start: 404224
End: 404697
Strand: Direct
Name: 119385960
Synonym: Pden_3238
Alternate gene names: NA
Gene position: 404224-404697 (Clockwise)
Preceding gene: 119385958
Following gene: 119385961
Centisome position: 23.36
GC content: 59.92
Gene sequence:
>474_bases ATGACGTTTTCCCTGCGACGCCTAGCCCTTGTTGCCGCCCTCGGAGTTACACCGTTCGCAGCTTGGTGGGCCGCCGCCGA GGAAACACGCGTCACCTTCCCCGATCTGGATGCGCTCATCCATTACACCACCGTCACCCGTGGCAATGTGGTCGAGCATA TGCTGACCACGCAAGAGGCCATTGACGCGGTGCAGGCGGGTCAGCCGATCCCAGCCGGCACGCATGTCGTGCTGGTCGAC TACCGTGATGGCTCGGATGAGGTTTATCGATATTTAGTGATGCAGAAGGGCGAGGGCTGGGGCGACGACTTCGATGAGCG TCGTCGCACCGGCGACTGGCAGTTCCAGTTCTACTGGGGCGACCGTTCGATCAACATGGATGAGAACACCGCCCGCTGCC AGCGATGCCACCAGTCACGGGCAAGTTCAGATTATATGTATACTTACAACGACCTGCGGAGGTTCGGGCAGTGA
Upstream 100 bases:
>100_bases GATTGGAGCCTTTGCACATAGTATTTTTTGCCACTGGACGCCCTGGTTTCGGATTCGGGACGCGCCGCGCCCAGCCGCAA TCCATGAGCCAGGAGTTCCG
Downstream 100 bases:
>100_bases AGGCCGTTCTGCCCCCCGCCAGACCTCTCCTGCCGCAGGATTGCCGATGACCATTCGCATCCGCATCCTCCTGGACTTCC TCGCCGTCGGGCTTTTCGTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 157; Mature: 156
Protein sequence:
>157_residues MTFSLRRLALVAALGVTPFAAWWAAAEETRVTFPDLDALIHYTTVTRGNVVEHMLTTQEAIDAVQAGQPIPAGTHVVLVD YRDGSDEVYRYLVMQKGEGWGDDFDERRRTGDWQFQFYWGDRSINMDENTARCQRCHQSRASSDYMYTYNDLRRFGQ
Sequences:
>Translated_157_residues MTFSLRRLALVAALGVTPFAAWWAAAEETRVTFPDLDALIHYTTVTRGNVVEHMLTTQEAIDAVQAGQPIPAGTHVVLVD YRDGSDEVYRYLVMQKGEGWGDDFDERRRTGDWQFQFYWGDRSINMDENTARCQRCHQSRASSDYMYTYNDLRRFGQ >Mature_156_residues TFSLRRLALVAALGVTPFAAWWAAAEETRVTFPDLDALIHYTTVTRGNVVEHMLTTQEAIDAVQAGQPIPAGTHVVLVDY RDGSDEVYRYLVMQKGEGWGDDFDERRRTGDWQFQFYWGDRSINMDENTARCQRCHQSRASSDYMYTYNDLRRFGQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18113; Mature: 17982
Theoretical pI: Translated: 4.96; Mature: 4.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFSLRRLALVAALGVTPFAAWWAAAEETRVTFPDLDALIHYTTVTRGNVVEHMLTTQEA CCCCHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCHHHHEEHHHCCCCHHHHHHHHHHHH IDAVQAGQPIPAGTHVVLVDYRDGSDEVYRYLVMQKGEGWGDDFDERRRTGDWQFQFYWG HHHHHCCCCCCCCCEEEEEEECCCHHHHHHHHHHCCCCCCCCCHHHHHCCCCEEEEEEEC DRSINMDENTARCQRCHQSRASSDYMYTYNDLRRFGQ CCCCCCCCCHHHHHHHHHHCCCCCEEEEHHHHHHHCC >Mature Secondary Structure TFSLRRLALVAALGVTPFAAWWAAAEETRVTFPDLDALIHYTTVTRGNVVEHMLTTQEA CCCHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCHHHHEEHHHCCCCHHHHHHHHHHHH IDAVQAGQPIPAGTHVVLVDYRDGSDEVYRYLVMQKGEGWGDDFDERRRTGDWQFQFYWG HHHHHCCCCCCCCCEEEEEEECCCHHHHHHHHHHCCCCCCCCCHHHHHCCCCEEEEEEEC DRSINMDENTARCQRCHQSRASSDYMYTYNDLRRFGQ CCCCCCCCCHHHHHHHHHHCCCCCEEEEHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA