| Definition | Paracoccus denitrificans PD1222 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_008687 |
| Length | 1,730,097 |
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The map label for this gene is crt [H]
Identifier: 119385935
GI number: 119385935
Start: 377773
End: 378576
Strand: Direct
Name: crt [H]
Synonym: Pden_3213
Alternate gene names: 119385935
Gene position: 377773-378576 (Clockwise)
Preceding gene: 119385934
Following gene: 119385936
Centisome position: 21.84
GC content: 64.8
Gene sequence:
>804_bases ATGGCCCAAGCGAAGATTCTCACGGAACGCGAAGGCGCCGTCCTGCGGGTTACACTCAACGATCCGGCGACCCGCAACTC CCTGACGCCCGAACTGGTCGCAGGCCTACACCGGGCGCTTGTCGCGGCGGATGAGGATCAGACGGTCAGTTGCGTTGTTC TGACTGGTGCCGGCAAGGGATTTTGCGCCGGGGGGAACATCAAGGACATGCGCGACGGGAATGACCCGATGTTCCGGGGT ACGCCGCACGAGATGCAGGAGGGCTATCGCAACGGCATTCAAGCCCTGCCGCGGCTGTTCAACCGGCTTGATGTGCCGGT CATCGCCGCCGTGAACGGCAGCGCCATTGGCGCCGGCTGCGATCTGGCCTGCATGTGCGACATCCGGGTCGGCGCAAGCG ATACGAAATTCGCGGAAAGCTTCATGCGGGTCGGGCTGGTCTCCGGCGACGGTGGCGCATGGTATCTGCCGCGCGTAGTC GGTCTGCCGCGCGCGCTGGAAATGGCGCTGACCTGCGCGACCCTCGATGCGCAAGAAGCGCTGGCCTTCGGCTTGGTTAC CCATGTCGTGGAACCCGGGGCGCTGCTCGACAAGGCCATGGACCTTGCGCACGCGATCGCGGCGCATCCTCCCCGCAGCA TCCGTCTGAACAAAAGGCTGCTGAAGAGGTCGAACGAGATCGACCTGGAGGCCGCGCTTGAACTGGCGGCTTCCTACCAG GCGATCGTGCAGAACACCGCGGATCAGAAGGAAGCCGTCAGCGCGCTGCTGGAGAAACGCGCCCCTGCCTATGTCGGACG CTGA
Upstream 100 bases:
>100_bases AGCGCCGACCAGATTGACGAGGCCTATGCGCGTGTACTGCGCGGGGACGTGAAGTTCCGTTTCGTCATCGACACCAACAC GTTGCAATGAGGTGAGTCAC
Downstream 100 bases:
>100_bases ATTTTCATGGGAGGAGGAACCATGTCCCATCATCACAAGGAGCCGGGCGAAGGGTGCGGTGGTGCAGATGATTTCGATTG CGGCTGGTCGATGACCAGTC
Product: enoyl-CoA hydratase/isomerase
Products: NA
Alternate protein names: Crotonase [H]
Number of amino acids: Translated: 267; Mature: 266
Protein sequence:
>267_residues MAQAKILTEREGAVLRVTLNDPATRNSLTPELVAGLHRALVAADEDQTVSCVVLTGAGKGFCAGGNIKDMRDGNDPMFRG TPHEMQEGYRNGIQALPRLFNRLDVPVIAAVNGSAIGAGCDLACMCDIRVGASDTKFAESFMRVGLVSGDGGAWYLPRVV GLPRALEMALTCATLDAQEALAFGLVTHVVEPGALLDKAMDLAHAIAAHPPRSIRLNKRLLKRSNEIDLEAALELAASYQ AIVQNTADQKEAVSALLEKRAPAYVGR
Sequences:
>Translated_267_residues MAQAKILTEREGAVLRVTLNDPATRNSLTPELVAGLHRALVAADEDQTVSCVVLTGAGKGFCAGGNIKDMRDGNDPMFRG TPHEMQEGYRNGIQALPRLFNRLDVPVIAAVNGSAIGAGCDLACMCDIRVGASDTKFAESFMRVGLVSGDGGAWYLPRVV GLPRALEMALTCATLDAQEALAFGLVTHVVEPGALLDKAMDLAHAIAAHPPRSIRLNKRLLKRSNEIDLEAALELAASYQ AIVQNTADQKEAVSALLEKRAPAYVGR >Mature_266_residues AQAKILTEREGAVLRVTLNDPATRNSLTPELVAGLHRALVAADEDQTVSCVVLTGAGKGFCAGGNIKDMRDGNDPMFRGT PHEMQEGYRNGIQALPRLFNRLDVPVIAAVNGSAIGAGCDLACMCDIRVGASDTKFAESFMRVGLVSGDGGAWYLPRVVG LPRALEMALTCATLDAQEALAFGLVTHVVEPGALLDKAMDLAHAIAAHPPRSIRLNKRLLKRSNEIDLEAALELAASYQA IVQNTADQKEAVSALLEKRAPAYVGR
Specific function: Could Possibly Oxidizes Fatty Acids Using Specific Components (By Similarity). [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the enoyl-CoA hydratase/isomerase family [H]
Homologues:
Organism=Homo sapiens, GI194097323, Length=262, Percent_Identity=32.4427480916031, Blast_Score=126, Evalue=2e-29, Organism=Homo sapiens, GI4502327, Length=266, Percent_Identity=31.9548872180451, Blast_Score=108, Evalue=6e-24, Organism=Homo sapiens, GI31542718, Length=255, Percent_Identity=30.9803921568627, Blast_Score=101, Evalue=6e-22, Organism=Homo sapiens, GI70995211, Length=267, Percent_Identity=31.8352059925094, Blast_Score=97, Evalue=1e-20, Organism=Homo sapiens, GI260274832, Length=229, Percent_Identity=25.3275109170306, Blast_Score=83, Evalue=2e-16, Organism=Homo sapiens, GI45643119, Length=229, Percent_Identity=25.3275109170306, Blast_Score=83, Evalue=2e-16, Organism=Homo sapiens, GI260275230, Length=229, Percent_Identity=25.3275109170306, Blast_Score=83, Evalue=2e-16, Organism=Homo sapiens, GI221136756, Length=257, Percent_Identity=26.4591439688716, Blast_Score=82, Evalue=3e-16, Organism=Homo sapiens, GI221136753, Length=257, Percent_Identity=26.4591439688716, Blast_Score=82, Evalue=3e-16, Organism=Homo sapiens, GI221307494, Length=210, Percent_Identity=30.4761904761905, Blast_Score=82, Evalue=7e-16, Organism=Homo sapiens, GI37594469, Length=197, Percent_Identity=27.4111675126904, Blast_Score=79, Evalue=6e-15, Organism=Homo sapiens, GI37594471, Length=197, Percent_Identity=27.4111675126904, Blast_Score=79, Evalue=6e-15, Organism=Homo sapiens, GI150378541, Length=270, Percent_Identity=27.7777777777778, Blast_Score=77, Evalue=2e-14, Organism=Homo sapiens, GI116235487, Length=196, Percent_Identity=26.0204081632653, Blast_Score=75, Evalue=6e-14, Organism=Homo sapiens, GI68989263, Length=233, Percent_Identity=28.755364806867, Blast_Score=75, Evalue=8e-14, Organism=Homo sapiens, GI25453481, Length=264, Percent_Identity=25.7575757575758, Blast_Score=74, Evalue=1e-13, Organism=Homo sapiens, GI51538573, Length=264, Percent_Identity=25.7575757575758, Blast_Score=74, Evalue=1e-13, Organism=Homo sapiens, GI4757966, Length=251, Percent_Identity=25.8964143426295, Blast_Score=74, Evalue=1e-13, Organism=Homo sapiens, GI51538581, Length=251, Percent_Identity=25.8964143426295, Blast_Score=74, Evalue=1e-13, Organism=Homo sapiens, GI20127408, Length=186, Percent_Identity=29.5698924731183, Blast_Score=72, Evalue=4e-13, Organism=Homo sapiens, GI4757968, Length=264, Percent_Identity=26.8939393939394, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI49355787, Length=264, Percent_Identity=26.8939393939394, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI213417737, Length=221, Percent_Identity=24.4343891402715, Blast_Score=69, Evalue=4e-12, Organism=Homo sapiens, GI157694516, Length=221, Percent_Identity=24.4343891402715, Blast_Score=69, Evalue=4e-12, Organism=Escherichia coli, GI1787659, Length=267, Percent_Identity=34.0823970037453, Blast_Score=145, Evalue=2e-36, Organism=Escherichia coli, GI1787660, Length=263, Percent_Identity=38.0228136882129, Blast_Score=143, Evalue=1e-35, Organism=Escherichia coli, GI221142681, Length=274, Percent_Identity=32.4817518248175, Blast_Score=113, Evalue=2e-26, Organism=Escherichia coli, GI1788597, Length=255, Percent_Identity=31.3725490196078, Blast_Score=112, Evalue=2e-26, Organism=Escherichia coli, GI87082183, Length=248, Percent_Identity=26.6129032258064, Blast_Score=91, Evalue=9e-20, Organism=Escherichia coli, GI1788682, Length=207, Percent_Identity=31.8840579710145, Blast_Score=81, Evalue=6e-17, Organism=Escherichia coli, GI1790281, Length=192, Percent_Identity=28.125, Blast_Score=73, Evalue=2e-14, Organism=Caenorhabditis elegans, GI25145438, Length=263, Percent_Identity=34.2205323193916, Blast_Score=132, Evalue=2e-31, Organism=Caenorhabditis elegans, GI17554946, Length=264, Percent_Identity=29.5454545454545, Blast_Score=122, Evalue=2e-28, Organism=Caenorhabditis elegans, GI17560910, Length=205, Percent_Identity=32.6829268292683, Blast_Score=112, Evalue=2e-25, Organism=Caenorhabditis elegans, GI17535521, Length=216, Percent_Identity=28.7037037037037, Blast_Score=108, Evalue=3e-24, Organism=Caenorhabditis elegans, GI17540714, Length=232, Percent_Identity=29.3103448275862, Blast_Score=99, Evalue=2e-21, Organism=Caenorhabditis elegans, GI17536985, Length=269, Percent_Identity=27.1375464684015, Blast_Score=97, Evalue=8e-21, Organism=Caenorhabditis elegans, GI17540306, Length=267, Percent_Identity=30.7116104868914, Blast_Score=91, Evalue=7e-19, Organism=Caenorhabditis elegans, GI17534483, Length=257, Percent_Identity=26.4591439688716, Blast_Score=89, Evalue=3e-18, Organism=Caenorhabditis elegans, GI17549921, Length=236, Percent_Identity=30.0847457627119, Blast_Score=85, Evalue=5e-17, Organism=Caenorhabditis elegans, GI25144160, Length=281, Percent_Identity=27.0462633451957, Blast_Score=83, Evalue=1e-16, Organism=Caenorhabditis elegans, GI25144157, Length=281, Percent_Identity=27.0462633451957, Blast_Score=83, Evalue=2e-16, Organism=Caenorhabditis elegans, GI17558304, Length=189, Percent_Identity=29.1005291005291, Blast_Score=75, Evalue=2e-14, Organism=Caenorhabditis elegans, GI25144276, Length=188, Percent_Identity=30.3191489361702, Blast_Score=74, Evalue=7e-14, Organism=Caenorhabditis elegans, GI17508953, Length=188, Percent_Identity=30.3191489361702, Blast_Score=74, Evalue=8e-14, Organism=Caenorhabditis elegans, GI17508951, Length=188, Percent_Identity=30.3191489361702, Blast_Score=74, Evalue=9e-14, Organism=Caenorhabditis elegans, GI25141363, Length=239, Percent_Identity=25.5230125523013, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI20129971, Length=249, Percent_Identity=36.144578313253, Blast_Score=139, Evalue=2e-33, Organism=Drosophila melanogaster, GI24653477, Length=249, Percent_Identity=36.144578313253, Blast_Score=139, Evalue=2e-33, Organism=Drosophila melanogaster, GI24653139, Length=271, Percent_Identity=33.210332103321, Blast_Score=124, Evalue=9e-29, Organism=Drosophila melanogaster, GI19922422, Length=262, Percent_Identity=30.9160305343511, Blast_Score=116, Evalue=1e-26, Organism=Drosophila melanogaster, GI24654903, Length=220, Percent_Identity=27.7272727272727, Blast_Score=95, Evalue=5e-20, Organism=Drosophila melanogaster, GI21357171, Length=240, Percent_Identity=29.1666666666667, Blast_Score=90, Evalue=1e-18, Organism=Drosophila melanogaster, GI24650670, Length=249, Percent_Identity=29.3172690763052, Blast_Score=82, Evalue=3e-16, Organism=Drosophila melanogaster, GI19920382, Length=256, Percent_Identity=27.34375, Blast_Score=77, Evalue=1e-14, Organism=Drosophila melanogaster, GI28571730, Length=182, Percent_Identity=27.4725274725275, Blast_Score=71, Evalue=7e-13, Organism=Drosophila melanogaster, GI28571729, Length=182, Percent_Identity=27.4725274725275, Blast_Score=71, Evalue=7e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014748 - InterPro: IPR001753 - InterPro: IPR018376 [H]
Pfam domain/function: PF00378 ECH [H]
EC number: =4.2.1.55 [H]
Molecular weight: Translated: 28357; Mature: 28226
Theoretical pI: Translated: 6.36; Mature: 6.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQAKILTEREGAVLRVTLNDPATRNSLTPELVAGLHRALVAADEDQTVSCVVLTGAGKG CCCCCEEECCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEEECCCCC FCAGGNIKDMRDGNDPMFRGTPHEMQEGYRNGIQALPRLFNRLDVPVIAAVNGSAIGAGC EECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCC DLACMCDIRVGASDTKFAESFMRVGLVSGDGGAWYLPRVVGLPRALEMALTCATLDAQEA CEEEEEEEEECCCHHHHHHHHHHHEEEECCCCCEEHHHHHCCHHHHHHHHHHHHCCHHHH LAFGLVTHVVEPGALLDKAMDLAHAIAAHPPRSIRLNKRLLKRSNEIDLEAALELAASYQ HHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHH AIVQNTADQKEAVSALLEKRAPAYVGR HHHHCCCHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure AQAKILTEREGAVLRVTLNDPATRNSLTPELVAGLHRALVAADEDQTVSCVVLTGAGKG CCCCEEECCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEEECCCCC FCAGGNIKDMRDGNDPMFRGTPHEMQEGYRNGIQALPRLFNRLDVPVIAAVNGSAIGAGC EECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCC DLACMCDIRVGASDTKFAESFMRVGLVSGDGGAWYLPRVVGLPRALEMALTCATLDAQEA CEEEEEEEEECCCHHHHHHHHHHHEEEECCCCCEEHHHHHCCHHHHHHHHHHHHCCHHHH LAFGLVTHVVEPGALLDKAMDLAHAIAAHPPRSIRLNKRLLKRSNEIDLEAALELAASYQ HHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHH AIVQNTADQKEAVSALLEKRAPAYVGR HHHHCCCHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8655474; 11466286 [H]