Definition Paracoccus denitrificans PD1222 chromosome 2, complete sequence.
Accession NC_008687
Length 1,730,097

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The map label for this gene is 119385873

Identifier: 119385873

GI number: 119385873

Start: 328642

End: 329901

Strand: Direct

Name: 119385873

Synonym: Pden_3151

Alternate gene names: NA

Gene position: 328642-329901 (Clockwise)

Preceding gene: 119385870

Following gene: 119385874

Centisome position: 19.0

GC content: 75.95

Gene sequence:

>1260_bases
ATGAAGCAGTCTAGGACGGGGCGACATCCGGGCGTGAGTAACAAGCATGACGGGATTGCGGCGGCGGCGCAGGCGCTGGC
GGCGGGGGATGCGCTGACCGCGCTGAAGCGGGTCGCCCTGCGCGACGATCCGCCGGCGCTGGCGCTGCGCGGCATCGCCA
TGGCGCAGCTTGGCGATCTGGACCGGGCGCGGGACCTGCTGCGCCGCGCCGCGCGGGGGCTCGGTGCCGATCCCCTGGCC
CGCGCCCGCTGCCGGCTGGCCGCGGCGGAAATCGCGCTGGTCACGCGCGACCTGGGCGGTCTGGAGCGGGCGCTTGGCAC
GGCGCGAGGCGCGCTTGCGGCGCAAGGCGACTGGGCGAACGCCGCCCATGCCGGCTACCTGCAGGCCCGGCTGCTGCTGC
TGACCGGGCGTCTCGATCAGGCCGAGGCGGTGCTTGAGACGCTGGATGCCGCCGCGCTGCCCCCGGCGTCGCGCCCCGGC
TGCTGGTTGGTCGCCGCGGGCATCGCCATGCGGCGCATCCGGGCCGGCGATGCGCGGGCCGCGCTGGACCGGGCCGCCCG
TGCCGCGCATCAGACGGGCATCGCCGCATTGGCGGCCGAGGTCGCACAGGCGCGCGCCGCCTTCGACGCCCCGGCCGGGC
GGCTGATCGAAAGCGGGCGCGAGACCCTGCTGGACCTGGCCGGGGTCGAGGCGCTGCTCGGCGCGGACCTGCTGCTGGTC
GATGCCTGCCGCAACCTTCTGCGCGGCGGCGCGACGCTGGTGCCGCTGGCCGGGCGGCCGGTGCTGATGGCGCTGCTGCG
CGCGCTGGCCGAGGCATGGCCCGGCGACGCGCCGCGCGAAACCCTGCTCGCGCGTGCCTTTCGCGCCCGCCATGCCGACG
AGTCGCATCGGGCAAGATTGCGGGTGGAGATCGGGCGGCTGCGCGAACACCTCTCCCCGCTGGCCGGGATAAAGGCGACG
GGCCGGGGCTTCGTGCTGGAGCCTTGCGGAGGGCGCAGGATCGCCGTGCTGGCCCCGCCGGTCGAGGGTGATCATGCCGG
GCTGCTGGCCCTGCTGGCCGATGGCGAGGCCTGGTCGAGTTCGGCGCTGGCCCTGGCGCTGGATGTCAGCCCGCGCAGCG
TGCAGCGCGGGCTCAAGGCGCTGGAGCGGGCCGGCAGGGTGGAATGGCTGGGCCACGGCCGCGCCCGGCGTTGGGTCGCG
CGAAGCGTGCCGGGTTTCCCGACAGGCTTGTTACTCCCGGCGCCCGTGCCGATGCGCTAG

Upstream 100 bases:

>100_bases
CGTGAAGCAGGGCGCCGCCGCAAGGGCCAGCCAGCCGGCCGCGCCGGGCTTTTCCGTGGGCGTTGTCATTGCGGGCCTCC
CGTCCGATGCTTTGCGGGAC

Downstream 100 bases:

>100_bases
GATGGGCCCATGAAACGCATGGCCGAAATCATCCGCGAATATGGCCCCTTTCCGGGGATCGAGGAGGTGCATGGCGTCAG
TTTCGACGGAAGGCAGGTTT

Product: tetratricopeptide TPR_4

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 419; Mature: 419

Protein sequence:

>419_residues
MKQSRTGRHPGVSNKHDGIAAAAQALAAGDALTALKRVALRDDPPALALRGIAMAQLGDLDRARDLLRRAARGLGADPLA
RARCRLAAAEIALVTRDLGGLERALGTARGALAAQGDWANAAHAGYLQARLLLLTGRLDQAEAVLETLDAAALPPASRPG
CWLVAAGIAMRRIRAGDARAALDRAARAAHQTGIAALAAEVAQARAAFDAPAGRLIESGRETLLDLAGVEALLGADLLLV
DACRNLLRGGATLVPLAGRPVLMALLRALAEAWPGDAPRETLLARAFRARHADESHRARLRVEIGRLREHLSPLAGIKAT
GRGFVLEPCGGRRIAVLAPPVEGDHAGLLALLADGEAWSSSALALALDVSPRSVQRGLKALERAGRVEWLGHGRARRWVA
RSVPGFPTGLLLPAPVPMR

Sequences:

>Translated_419_residues
MKQSRTGRHPGVSNKHDGIAAAAQALAAGDALTALKRVALRDDPPALALRGIAMAQLGDLDRARDLLRRAARGLGADPLA
RARCRLAAAEIALVTRDLGGLERALGTARGALAAQGDWANAAHAGYLQARLLLLTGRLDQAEAVLETLDAAALPPASRPG
CWLVAAGIAMRRIRAGDARAALDRAARAAHQTGIAALAAEVAQARAAFDAPAGRLIESGRETLLDLAGVEALLGADLLLV
DACRNLLRGGATLVPLAGRPVLMALLRALAEAWPGDAPRETLLARAFRARHADESHRARLRVEIGRLREHLSPLAGIKAT
GRGFVLEPCGGRRIAVLAPPVEGDHAGLLALLADGEAWSSSALALALDVSPRSVQRGLKALERAGRVEWLGHGRARRWVA
RSVPGFPTGLLLPAPVPMR
>Mature_419_residues
MKQSRTGRHPGVSNKHDGIAAAAQALAAGDALTALKRVALRDDPPALALRGIAMAQLGDLDRARDLLRRAARGLGADPLA
RARCRLAAAEIALVTRDLGGLERALGTARGALAAQGDWANAAHAGYLQARLLLLTGRLDQAEAVLETLDAAALPPASRPG
CWLVAAGIAMRRIRAGDARAALDRAARAAHQTGIAALAAEVAQARAAFDAPAGRLIESGRETLLDLAGVEALLGADLLLV
DACRNLLRGGATLVPLAGRPVLMALLRALAEAWPGDAPRETLLARAFRARHADESHRARLRVEIGRLREHLSPLAGIKAT
GRGFVLEPCGGRRIAVLAPPVEGDHAGLLALLADGEAWSSSALALALDVSPRSVQRGLKALERAGRVEWLGHGRARRWVA
RSVPGFPTGLLLPAPVPMR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43786; Mature: 43786

Theoretical pI: Translated: 11.66; Mature: 11.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQSRTGRHPGVSNKHDGIAAAAQALAAGDALTALKRVALRDDPPALALRGIAMAQLGDL
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCH
DRARDLLRRAARGLGADPLARARCRLAAAEIALVTRDLGGLERALGTARGALAAQGDWAN
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
AAHAGYLQARLLLLTGRLDQAEAVLETLDAAALPPASRPGCWLVAAGIAMRRIRAGDARA
CHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCHHH
ALDRAARAAHQTGIAALAAEVAQARAAFDAPAGRLIESGRETLLDLAGVEALLGADLLLV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
DACRNLLRGGATLVPLAGRPVLMALLRALAEAWPGDAPRETLLARAFRARHADESHRARL
HHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHH
RVEIGRLREHLSPLAGIKATGRGFVLEPCGGRRIAVLAPPVEGDHAGLLALLADGEAWSS
HHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCEEEEEECCCCCCCCCEEEEEECCCCCCC
SALALALDVSPRSVQRGLKALERAGRVEWLGHGRARRWVARSVPGFPTGLLLPAPVPMR
CCEEEEEECCHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKQSRTGRHPGVSNKHDGIAAAAQALAAGDALTALKRVALRDDPPALALRGIAMAQLGDL
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCH
DRARDLLRRAARGLGADPLARARCRLAAAEIALVTRDLGGLERALGTARGALAAQGDWAN
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
AAHAGYLQARLLLLTGRLDQAEAVLETLDAAALPPASRPGCWLVAAGIAMRRIRAGDARA
CHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCHHH
ALDRAARAAHQTGIAALAAEVAQARAAFDAPAGRLIESGRETLLDLAGVEALLGADLLLV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
DACRNLLRGGATLVPLAGRPVLMALLRALAEAWPGDAPRETLLARAFRARHADESHRARL
HHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHH
RVEIGRLREHLSPLAGIKATGRGFVLEPCGGRRIAVLAPPVEGDHAGLLALLADGEAWSS
HHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCEEEEEECCCCCCCCCEEEEEECCCCCCC
SALALALDVSPRSVQRGLKALERAGRVEWLGHGRARRWVARSVPGFPTGLLLPAPVPMR
CCEEEEEECCHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA