| Definition | Paracoccus denitrificans PD1222 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_008687 |
| Length | 1,730,097 |
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The map label for this gene is 119385874
Identifier: 119385874
GI number: 119385874
Start: 329911
End: 330552
Strand: Direct
Name: 119385874
Synonym: Pden_3152
Alternate gene names: NA
Gene position: 329911-330552 (Clockwise)
Preceding gene: 119385873
Following gene: 119385875
Centisome position: 19.07
GC content: 69.31
Gene sequence:
>642_bases ATGAAACGCATGGCCGAAATCATCCGCGAATATGGCCCCTTTCCGGGGATCGAGGAGGTGCATGGCGTCAGTTTCGACGG AAGGCAGGTTTGGTTCGCCAGCGGCGAACGGCTGAACGCGCTCGACCCCGACAGCGGCGAGCTGCTGGGCGCGCTAAAGA TCCCCGCCGATGCCGGCACGGCCTTCGACGGCCGGCATCTGTTCCAGATCGCCGGGCCGGTCATCCGCAAGATCGACCCG GAGAGCGGCGCGGTTCTGGCGACCATTCCCGCGCCCGAGGGCGGCAATTCCGGGCTGGCCTGGGCCGAGGGCTCGCTCTG GGTCGGCCAGCATCGCGGGCGCCGCATCCACCAGGTCGATCCCGAGACCGGCAAGGTGCTGCGCAGCATCGACTGCGACC GCTTCGTCACTGGCGTCACCTGGGCCGACGGCGCGCTCTGGCACGGCACCTGGCAGGGCGAGGAAAGCGACATCCGGCGC ATCGACCCCGCCACCGGCGCAGTGCTGGAACGGCTGGAGATGCCGCCGGGCACCGGGGTCTCGGGGTTGGAATCGGATGG CGGCGCCCGGTTCTTCTGCGGCGGCGGCAGCAGCGGCAAGTTGAGGGTCGTTCTGCGCAAGGCGGATCAGGACGCGACAT AG
Upstream 100 bases:
>100_bases GGGCCACGGCCGCGCCCGGCGTTGGGTCGCGCGAAGCGTGCCGGGTTTCCCGACAGGCTTGTTACTCCCGGCGCCCGTGC CGATGCGCTAGGATGGGCCC
Downstream 100 bases:
>100_bases GGCCTTCGGTTCTTGCTGCGCAAACCGGCCCCTCGCTCGGAACCTGACAGCGGGCCTGTGGCAGGCTATGCTGTTGGGGT CCTTTCTATCAGCCAGCGGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 213; Mature: 213
Protein sequence:
>213_residues MKRMAEIIREYGPFPGIEEVHGVSFDGRQVWFASGERLNALDPDSGELLGALKIPADAGTAFDGRHLFQIAGPVIRKIDP ESGAVLATIPAPEGGNSGLAWAEGSLWVGQHRGRRIHQVDPETGKVLRSIDCDRFVTGVTWADGALWHGTWQGEESDIRR IDPATGAVLERLEMPPGTGVSGLESDGGARFFCGGGSSGKLRVVLRKADQDAT
Sequences:
>Translated_213_residues MKRMAEIIREYGPFPGIEEVHGVSFDGRQVWFASGERLNALDPDSGELLGALKIPADAGTAFDGRHLFQIAGPVIRKIDP ESGAVLATIPAPEGGNSGLAWAEGSLWVGQHRGRRIHQVDPETGKVLRSIDCDRFVTGVTWADGALWHGTWQGEESDIRR IDPATGAVLERLEMPPGTGVSGLESDGGARFFCGGGSSGKLRVVLRKADQDAT >Mature_213_residues MKRMAEIIREYGPFPGIEEVHGVSFDGRQVWFASGERLNALDPDSGELLGALKIPADAGTAFDGRHLFQIAGPVIRKIDP ESGAVLATIPAPEGGNSGLAWAEGSLWVGQHRGRRIHQVDPETGKVLRSIDCDRFVTGVTWADGALWHGTWQGEESDIRR IDPATGAVLERLEMPPGTGVSGLESDGGARFFCGGGSSGKLRVVLRKADQDAT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22770; Mature: 22770
Theoretical pI: Translated: 5.12; Mature: 5.12
Prosite motif: PS00455 AMP_BINDING
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRMAEIIREYGPFPGIEEVHGVSFDGRQVWFASGERLNALDPDSGELLGALKIPADAGT CHHHHHHHHHHCCCCCHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCEEEEEECCCCCCC AFDGRHLFQIAGPVIRKIDPESGAVLATIPAPEGGNSGLAWAEGSLWVGQHRGRRIHQVD CCCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCEEECCCEEEECCCCCEEEECC PETGKVLRSIDCDRFVTGVTWADGALWHGTWQGEESDIRRIDPATGAVLERLEMPPGTGV CHHHHHHHHCCCCHHEECEEECCCEEEECCCCCCCCCCEECCCHHHHHHHHHCCCCCCCC SGLESDGGARFFCGGGSSGKLRVVLRKADQDAT CCCCCCCCEEEEECCCCCCEEEEEEEECCCCCC >Mature Secondary Structure MKRMAEIIREYGPFPGIEEVHGVSFDGRQVWFASGERLNALDPDSGELLGALKIPADAGT CHHHHHHHHHHCCCCCHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCEEEEEECCCCCCC AFDGRHLFQIAGPVIRKIDPESGAVLATIPAPEGGNSGLAWAEGSLWVGQHRGRRIHQVD CCCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCEEECCCEEEECCCCCEEEECC PETGKVLRSIDCDRFVTGVTWADGALWHGTWQGEESDIRRIDPATGAVLERLEMPPGTGV CHHHHHHHHCCCCHHEECEEECCCEEEECCCCCCCCCCEECCCHHHHHHHHHCCCCCCCC SGLESDGGARFFCGGGSSGKLRVVLRKADQDAT CCCCCCCCEEEEECCCCCCEEEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA