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The map label for this gene is 119385841

Identifier: 119385841

GI number: 119385841

Start: 303258

End: 303755

Strand: Direct

Name: 119385841

Synonym: Pden_3119

Alternate gene names: NA

Gene position: 303258-303755 (Clockwise)

Preceding gene: 119385839

Following gene: 119385842

Centisome position: 17.53

GC content: 66.87

Gene sequence:

>498_bases
ATGTCCCGCATCACTGTCTTGACCGCCGCTCCGAATCGTAACATATATAGTTACATGAAACGTGACAGTCGCCTTTCCTC
GGTCCTTCATGCCCTGCTGCACATGGCGGAACAGGACGGACCTGTGACCTCCGAGGCGCTTGGCCGGTGCCTCGGCACCA
ATCCGGTCGTGGTGCGCCGCACCATGGGCCTCTTGCGCGAGGCCGGGCTTGTCACGGCCGAGCGAGGGCACGCCGGGGGC
TGGCGCATCTCGGCCGACCTGGCGGCGGTCAGCCTGCGCCGGCTGCACGAGGCCTTGGGGGAACCGGCGATCTTCGCGAT
CGGCAACCGCAACGAGACGCCGGAATGCCTGGTCGAGCAATCGGTCAATGCCGCGCTGGAGGGTGCCTTTGCCGAGGCCG
AGGCGCTGCTGCTGGAACGTTTCGCCGAGGTGACGCTGGCCGATCTGGCCGAGGATTTTGCCCGCCGCCATGCGCAGAGG
CGGGCGGCGAAGGAGTAG

Upstream 100 bases:

>100_bases
CTCCTTCAACCCGTCGAGTTCGTCCTGATTGGTGATCGTCATCGCCTGTGCCCGCTTTGATCTGATGCTGTAACCGACAT
CATAGCGGTGATGCGTGGCG

Downstream 100 bases:

>100_bases
GACATGCAGGACGTGATCGTGATCGGGGGCAGCTATGCCGGGATGGCCGCCGCCCTGCAGCTGGCGCGTGCGCGCCGCAA
GGTGCTGGTGATTGATGCCG

Product: BadM/Rrf2 family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator BadM/Rrf2 Family; Transcriptional Regulator; Rrf2 Family Protein; Rrf2 Family Transcriptional Regulator; Transcriptional Regulator Family; Transcriptional Regulator Badm/Rrf2 Family; Transcriptional Regulator Superfamily; HTH Domain-Containing; Transcriptional Regulator Rrf2 Family; Transcription Regulator Protein; HTH-Type Transcriptional Regulator YwnA; Rf2 Family Transcriptional Regulator; Transcriptional Regulator Family Protein

Number of amino acids: Translated: 165; Mature: 164

Protein sequence:

>165_residues
MSRITVLTAAPNRNIYSYMKRDSRLSSVLHALLHMAEQDGPVTSEALGRCLGTNPVVVRRTMGLLREAGLVTAERGHAGG
WRISADLAAVSLRRLHEALGEPAIFAIGNRNETPECLVEQSVNAALEGAFAEAEALLLERFAEVTLADLAEDFARRHAQR
RAAKE

Sequences:

>Translated_165_residues
MSRITVLTAAPNRNIYSYMKRDSRLSSVLHALLHMAEQDGPVTSEALGRCLGTNPVVVRRTMGLLREAGLVTAERGHAGG
WRISADLAAVSLRRLHEALGEPAIFAIGNRNETPECLVEQSVNAALEGAFAEAEALLLERFAEVTLADLAEDFARRHAQR
RAAKE
>Mature_164_residues
SRITVLTAAPNRNIYSYMKRDSRLSSVLHALLHMAEQDGPVTSEALGRCLGTNPVVVRRTMGLLREAGLVTAERGHAGGW
RISADLAAVSLRRLHEALGEPAIFAIGNRNETPECLVEQSVNAALEGAFAEAEALLLERFAEVTLADLAEDFARRHAQRR
AAKE

Specific function: Unknown

COG id: COG1959

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17972; Mature: 17841

Theoretical pI: Translated: 7.06; Mature: 7.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRITVLTAAPNRNIYSYMKRDSRLSSVLHALLHMAEQDGPVTSEALGRCLGTNPVVVRR
CCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCHHHHH
TMGLLREAGLVTAERGHAGGWRISADLAAVSLRRLHEALGEPAIFAIGNRNETPECLVEQ
HHHHHHHHCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHH
SVNAALEGAFAEAEALLLERFAEVTLADLAEDFARRHAQRRAAKE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SRITVLTAAPNRNIYSYMKRDSRLSSVLHALLHMAEQDGPVTSEALGRCLGTNPVVVRR
CCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCHHHHH
TMGLLREAGLVTAERGHAGGWRISADLAAVSLRRLHEALGEPAIFAIGNRNETPECLVEQ
HHHHHHHHCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHH
SVNAALEGAFAEAEALLLERFAEVTLADLAEDFARRHAQRRAAKE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA