| Definition | Paracoccus denitrificans PD1222 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_008687 |
| Length | 1,730,097 |
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The map label for this gene is 119385808
Identifier: 119385808
GI number: 119385808
Start: 268991
End: 269851
Strand: Direct
Name: 119385808
Synonym: Pden_3086
Alternate gene names: NA
Gene position: 268991-269851 (Clockwise)
Preceding gene: 119385807
Following gene: 119385809
Centisome position: 15.55
GC content: 54.7
Gene sequence:
>861_bases GTGAGAATGACGGCCTGTTTCACAAGCATCGTGATAGTCCTTGCCGCAACCGCCGCACCTGCCCTGGCTGAGGGGGTTGA TCCCTGCGCGGGTATCGACACCAATCTGACCGATAAGCGCGCCAGAGAATATGCCCACCTGATCGTCGACGCCTTTTCCA AGGATCTGAAGCCATCCGAGCGTTTCAAACCCTCAGATGTCGAGGTTGAATCGTTCCTGGGAAGCGGTCACTGGAGCGCT GTGAACGCATCCATTCCCACTGCTGATATGGGAATGTTCTTTTTCCAAGAGGTTGGTGGCAAGAAGCAGTTCAAGGATGT GTGGGGCGGCATTGCCGAAGCTTCCGAAGTCCCACAAGTCATAAAATGGGCCGAAGATCTGGGGGCGCCACATAATCTTG CGACCTGCTTCGCCGACCAGGTCAGCTTCGACGATAGTGCAGATTCTCCATTCGGTTTCACGGTCGATCTGATCTTCTCG ACCAAGGCAGAGGAACGTCTGACCGCGCTGCATGAGGAGGTTGTCGTATCAGCCTCCTACTATGGCGATCCTTCTGAAAA AGGTAAGGAATTCTCTGATGATGTCGGGCGATTTGACCTTGGCACGGAGACCGTGCAGGTGCCGGCTTCGCCGGGAATCG CTAAGATCAGCGGCAATCAGGTTGGCGAAAGTGACCTCGAATGGATAGAGGGCCGACCTAATGTCAATGTCAATGTTTTC ACTGCTCGCATCAGCGGCGACGACAATCTCATAAGTTGCGATTTCATTGACGGCCCACTTGACGATGTCATTCAGTCCAT GCCCGTCGCGCTGCACTGCACGCTGATCGAAGAGGAGGTCGATGCCGAGCTGAAGCCATGA
Upstream 100 bases:
>100_bases CAGAAGCGCGCATATGAACTGCGACAGTATCTGGAATGCGAAGAGGGCGATATGACCTGTCCCGTTCCGTTCGCCGATTA ACAGCTTGGGAGTGTATACA
Downstream 100 bases:
>100_bases CATGCGCGCTTTGGGAAATCCCCCGGTTTCTCTGGCCACGACTTCTCATCGCAACCAATCGCACGCGTATCAGAATGGAA CTGCCACCAACAGATCACCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 286; Mature: 286
Protein sequence:
>286_residues MRMTACFTSIVIVLAATAAPALAEGVDPCAGIDTNLTDKRAREYAHLIVDAFSKDLKPSERFKPSDVEVESFLGSGHWSA VNASIPTADMGMFFFQEVGGKKQFKDVWGGIAEASEVPQVIKWAEDLGAPHNLATCFADQVSFDDSADSPFGFTVDLIFS TKAEERLTALHEEVVVSASYYGDPSEKGKEFSDDVGRFDLGTETVQVPASPGIAKISGNQVGESDLEWIEGRPNVNVNVF TARISGDDNLISCDFIDGPLDDVIQSMPVALHCTLIEEEVDAELKP
Sequences:
>Translated_286_residues MRMTACFTSIVIVLAATAAPALAEGVDPCAGIDTNLTDKRAREYAHLIVDAFSKDLKPSERFKPSDVEVESFLGSGHWSA VNASIPTADMGMFFFQEVGGKKQFKDVWGGIAEASEVPQVIKWAEDLGAPHNLATCFADQVSFDDSADSPFGFTVDLIFS TKAEERLTALHEEVVVSASYYGDPSEKGKEFSDDVGRFDLGTETVQVPASPGIAKISGNQVGESDLEWIEGRPNVNVNVF TARISGDDNLISCDFIDGPLDDVIQSMPVALHCTLIEEEVDAELKP >Mature_286_residues MRMTACFTSIVIVLAATAAPALAEGVDPCAGIDTNLTDKRAREYAHLIVDAFSKDLKPSERFKPSDVEVESFLGSGHWSA VNASIPTADMGMFFFQEVGGKKQFKDVWGGIAEASEVPQVIKWAEDLGAPHNLATCFADQVSFDDSADSPFGFTVDLIFS TKAEERLTALHEEVVVSASYYGDPSEKGKEFSDDVGRFDLGTETVQVPASPGIAKISGNQVGESDLEWIEGRPNVNVNVF TARISGDDNLISCDFIDGPLDDVIQSMPVALHCTLIEEEVDAELKP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30859; Mature: 30859
Theoretical pI: Translated: 4.06; Mature: 4.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRMTACFTSIVIVLAATAAPALAEGVDPCAGIDTNLTDKRAREYAHLIVDAFSKDLKPSE CCHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCC RFKPSDVEVESFLGSGHWSAVNASIPTADMGMFFFQEVGGKKQFKDVWGGIAEASEVPQV CCCCCCCHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHH IKWAEDLGAPHNLATCFADQVSFDDSADSPFGFTVDLIFSTKAEERLTALHEEVVVSASY HHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHEEHHC YGDPSEKGKEFSDDVGRFDLGTETVQVPASPGIAKISGNQVGESDLEWIEGRPNVNVNVF CCCCHHHCCCHHHHCCCCCCCCCEEEECCCCCEEEECCCCCCCCHHHHHCCCCCCEEEEE TARISGDDNLISCDFIDGPLDDVIQSMPVALHCTLIEEEVDAELKP EEEECCCCCEEEEECCCCCHHHHHHHCCEEEEEEEEHHHCCCCCCC >Mature Secondary Structure MRMTACFTSIVIVLAATAAPALAEGVDPCAGIDTNLTDKRAREYAHLIVDAFSKDLKPSE CCHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCC RFKPSDVEVESFLGSGHWSAVNASIPTADMGMFFFQEVGGKKQFKDVWGGIAEASEVPQV CCCCCCCHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHH IKWAEDLGAPHNLATCFADQVSFDDSADSPFGFTVDLIFSTKAEERLTALHEEVVVSASY HHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHEEHHC YGDPSEKGKEFSDDVGRFDLGTETVQVPASPGIAKISGNQVGESDLEWIEGRPNVNVNVF CCCCHHHCCCHHHHCCCCCCCCCEEEECCCCCEEEECCCCCCCCHHHHHCCCCCCEEEEE TARISGDDNLISCDFIDGPLDDVIQSMPVALHCTLIEEEVDAELKP EEEECCCCCEEEEECCCCCHHHHHHHCCEEEEEEEEHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA