| Definition | Paracoccus denitrificans PD1222 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_008687 |
| Length | 1,730,097 |
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The map label for this gene is glnH [C]
Identifier: 119385809
GI number: 119385809
Start: 270066
End: 271148
Strand: Direct
Name: glnH [C]
Synonym: Pden_3087
Alternate gene names: 119385809
Gene position: 270066-271148 (Clockwise)
Preceding gene: 119385808
Following gene: 119385814
Centisome position: 15.61
GC content: 56.33
Gene sequence:
>1083_bases TTGACGCGTATATTGATGCCTGTCGTCATGTCACTGCTTCTGGCATTACTTGCGGCGCGCAGCGACGCGCAGGATGCGCC GCCGGAAGAATTGGTGGTCGGAGTCTATGTCAGCCCACCTTTCGTCGAGGAACACGACGATGGCAACTATTCCGGCATGG CAATCGATCTCTGGGAAACTGTTGCCGACCGGATGGATCTGGCTTTTCGCTATGCCACTTATCCAACCTTCGGCTCACTG GTCCGTGCCACGGCCAGTGGCGAGGTGGATGCGGCCGTTACCAATCTGACCATTACCCGTGAACGTGCCGAGCTCATCGC ATTCACCCAGCCGTGGTATGATGCCGGGTTAAGGATCATGGTGCCCAGTCAGGGGGGGGGCGGGTTTCGAGGCATGCTGA ACGGGCTTCAGAATGCCGGCCACCTCCGCGCCTACATATTTCTACTGTCAATGATCCTGATCGCTACTGTTGGCCTGTCA CTTTTTGATCGGCGATTTGATCCGGATCATCCCAGACGATGGCGTGAATCCATCGCGGAAAGTTTCTATCAGGTGATGTT GATTATCACCTCGGGACGAACTGCGCGCAAGAACCTGTTCGGCTGGGTCGGGCGCATCTGGCAGGCTCTCTGGCTTATCG TCGGCGTCGCGGTCATCGCCTATATTACTTCTTCGGTGACGAGCGTCATGACCACCGTGTCACTGACCCAAGGCATCTCC GCGCTGTCGGACCTGCCCGGCAACACGGTTGGTGTCCTTTCCGGCAGCGTTGCTGAGCAATATATGCGTGATATGGGTAT CGCCACGCGTTCATACGTCAATATCGATGCTTCGGTTGTCGCACTGCGCGAGGGGCGACTGGACGCGGTGGTGGGAGACG CGCCCATCCTTGAACATTATGTCCTTACACATCAGAAGGATAACCTGGCGGTTGTCGGCAACTTGTTTCATCCGGACAAA TACGGCTTTGCCTTCCCGCATGAAAGCAACCTGACGACACCGACTACACTGGAGCTTCTGGACCTTCAGGAAGACGGTAC GTTAGGGAACCTGAGGTTGGAGTACTTCGGCAGCAGAAATTGA
Upstream 100 bases:
>100_bases TGGTTGTCGGCGGCTGCTTGCAGGTCCTTCGATACCCGGAACTGCTCACAGCGACCCCGGCGACCACGATGGATCTCATG ACCTCGAGGAGGATAGCCGG
Downstream 100 bases:
>100_bases CCTTCACCTGACGATCAGCCAATCGTCTCGAACAGGCTAATAATCCAAATTGCCTCGAATATGATGGCAAATACGGCGAA AATGGCATGATAGCGGTCTG
Product: extracellular solute-binding protein
Products: ADP; phosphate; L-glutamine [Cytoplasm] [C]
Alternate protein names: Glutamate-Gated Potassium Channel; Ligand-Gated Ion Channel Family Protein; Ligand-Gated Ion Channel Periplasmic Domain; Ionotropic Glutamate Receptor
Number of amino acids: Translated: 360; Mature: 359
Protein sequence:
>360_residues MTRILMPVVMSLLLALLAARSDAQDAPPEELVVGVYVSPPFVEEHDDGNYSGMAIDLWETVADRMDLAFRYATYPTFGSL VRATASGEVDAAVTNLTITRERAELIAFTQPWYDAGLRIMVPSQGGGGFRGMLNGLQNAGHLRAYIFLLSMILIATVGLS LFDRRFDPDHPRRWRESIAESFYQVMLIITSGRTARKNLFGWVGRIWQALWLIVGVAVIAYITSSVTSVMTTVSLTQGIS ALSDLPGNTVGVLSGSVAEQYMRDMGIATRSYVNIDASVVALREGRLDAVVGDAPILEHYVLTHQKDNLAVVGNLFHPDK YGFAFPHESNLTTPTTLELLDLQEDGTLGNLRLEYFGSRN
Sequences:
>Translated_360_residues MTRILMPVVMSLLLALLAARSDAQDAPPEELVVGVYVSPPFVEEHDDGNYSGMAIDLWETVADRMDLAFRYATYPTFGSL VRATASGEVDAAVTNLTITRERAELIAFTQPWYDAGLRIMVPSQGGGGFRGMLNGLQNAGHLRAYIFLLSMILIATVGLS LFDRRFDPDHPRRWRESIAESFYQVMLIITSGRTARKNLFGWVGRIWQALWLIVGVAVIAYITSSVTSVMTTVSLTQGIS ALSDLPGNTVGVLSGSVAEQYMRDMGIATRSYVNIDASVVALREGRLDAVVGDAPILEHYVLTHQKDNLAVVGNLFHPDK YGFAFPHESNLTTPTTLELLDLQEDGTLGNLRLEYFGSRN >Mature_359_residues TRILMPVVMSLLLALLAARSDAQDAPPEELVVGVYVSPPFVEEHDDGNYSGMAIDLWETVADRMDLAFRYATYPTFGSLV RATASGEVDAAVTNLTITRERAELIAFTQPWYDAGLRIMVPSQGGGGFRGMLNGLQNAGHLRAYIFLLSMILIATVGLSL FDRRFDPDHPRRWRESIAESFYQVMLIITSGRTARKNLFGWVGRIWQALWLIVGVAVIAYITSSVTSVMTTVSLTQGISA LSDLPGNTVGVLSGSVAEQYMRDMGIATRSYVNIDASVVALREGRLDAVVGDAPILEHYVLTHQKDNLAVVGNLFHPDKY GFAFPHESNLTTPTTLELLDLQEDGTLGNLRLEYFGSRN
Specific function: Involved In A Glutamine-Transport System Glnhpq. [C]
COG id: COG0834
COG function: function code ET; ABC-type amino acid transport/signal transduction systems, periplasmic component/domain
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI223278356, Length=315, Percent_Identity=25.7142857142857, Blast_Score=70, Evalue=4e-12, Organism=Caenorhabditis elegans, GI193208538, Length=341, Percent_Identity=22.8739002932551, Blast_Score=69, Evalue=3e-12,
Paralogues:
None
Copy number: 1440 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 460 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39567; Mature: 39436
Theoretical pI: Translated: 4.91; Mature: 4.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRILMPVVMSLLLALLAARSDAQDAPPEELVVGVYVSPPFVEEHDDGNYSGMAIDLWET CCCHHHHHHHHHHHHHHHHCCCCCCCCHHHEEEEEEECCCCCCCCCCCCCCCEEEHHHHH VADRMDLAFRYATYPTFGSLVRATASGEVDAAVTNLTITRERAELIAFTQPWYDAGLRIM HHHHHHHHHHEECCCCHHHHHHHHCCCCCCEEEEEEEEEHHHHHEEEEECCHHHCCCEEE VPSQGGGGFRGMLNGLQNAGHLRAYIFLLSMILIATVGLSLFDRRFDPDHPRRWRESIAE EECCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH SFYQVMLIITSGRTARKNLFGWVGRIWQALWLIVGVAVIAYITSSVTSVMTTVSLTQGIS HHHHEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALSDLPGNTVGVLSGSVAEQYMRDMGIATRSYVNIDASVVALREGRLDAVVGDAPILEHY HHHHCCCCEEECCCCHHHHHHHHHHCCHHHHEEECCCEEEEEECCCCEEEECCCHHHHHH VLTHQKDNLAVVGNLFHPDKYGFAFPHESNLTTPTTLELLDLQEDGTLGNLRLEYFGSRN HHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCEEEEECCCCC >Mature Secondary Structure TRILMPVVMSLLLALLAARSDAQDAPPEELVVGVYVSPPFVEEHDDGNYSGMAIDLWET CCHHHHHHHHHHHHHHHHCCCCCCCCHHHEEEEEEECCCCCCCCCCCCCCCEEEHHHHH VADRMDLAFRYATYPTFGSLVRATASGEVDAAVTNLTITRERAELIAFTQPWYDAGLRIM HHHHHHHHHHEECCCCHHHHHHHHCCCCCCEEEEEEEEEHHHHHEEEEECCHHHCCCEEE VPSQGGGGFRGMLNGLQNAGHLRAYIFLLSMILIATVGLSLFDRRFDPDHPRRWRESIAE EECCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH SFYQVMLIITSGRTARKNLFGWVGRIWQALWLIVGVAVIAYITSSVTSVMTTVSLTQGIS HHHHEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALSDLPGNTVGVLSGSVAEQYMRDMGIATRSYVNIDASVVALREGRLDAVVGDAPILEHY HHHHCCCCEEECCCCHHHHHHHHHHCCHHHHEEECCCEEEEEECCCCEEEECCCHHHHHH VLTHQKDNLAVVGNLFHPDKYGFAFPHESNLTTPTTLELLDLQEDGTLGNLRLEYFGSRN HHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-glutamine [Periplasm]; H2O [C]
Specific reaction: ATP + L-glutamine [Periplasm] + H2O = ADP + phosphate + L-glutamine [Cytoplasm] [C]
General reaction: Translocates substrate across the membrane [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA