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The map label for this gene is 119385791

Identifier: 119385791

GI number: 119385791

Start: 248442

End: 248864

Strand: Direct

Name: 119385791

Synonym: Pden_3069

Alternate gene names: NA

Gene position: 248442-248864 (Clockwise)

Preceding gene: 119385790

Following gene: 119385798

Centisome position: 14.36

GC content: 62.41

Gene sequence:

>423_bases
GTGATCCGTTTCGGGCTCTATGCTTCGGAGGACTATGTCCGGCGAAACGGCTACCCGGATGTGCCGGAGGATCTGCATCG
GCACCAGGTCATAGGCTGGACCGAGGACCTGACCTATCTGGCCATGGCCAATTGGCTCGCGAGCCATTGTCCTGGGGTTC
GCCCATCACTGCGCCTTACATCCTTTGCCGCCCAGGCCGAGGCAGTCCGACAAGGCGCCGGCTGGGCGGTGCTGCCCGAC
TTCATCGCCGTCCCTGCCGGCTTTGCGCCGGGAATGCCCGATTTGTTCCGCTCGGAGTCCGAACTCTGGCTGCTGACCCA
TGCACAGTCTCGGGCGCTCCAGCGCGTAAATCTGGTGCGAGATCGTGTCATCGTCGCGATAAGGGAGGAATTGAACCAGC
TACAACCGCAACACTCGGCGTGA

Upstream 100 bases:

>100_bases
CCGCTGTCTTCCGCAGGCGCCTTTGCGCGATCAATCCGAAGCAGTCCTTGCCTGAATGAACCCTCCGGCGGCGATGCCCT
GCTCGTAGGGGCGGCTGGCC

Downstream 100 bases:

>100_bases
GCCCGATCCGTGGCGCGGATACGCTGTCCCTGCTTTCACGATACCGTATTTCGCGACATTGCGGATCTGGTCGATCGGGG
GATGGTTGAGAAAGAGGATG

Product: LysR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator LysR Family; Transcriptional Regulator

Number of amino acids: Translated: 140; Mature: 140

Protein sequence:

>140_residues
MIRFGLYASEDYVRRNGYPDVPEDLHRHQVIGWTEDLTYLAMANWLASHCPGVRPSLRLTSFAAQAEAVRQGAGWAVLPD
FIAVPAGFAPGMPDLFRSESELWLLTHAQSRALQRVNLVRDRVIVAIREELNQLQPQHSA

Sequences:

>Translated_140_residues
MIRFGLYASEDYVRRNGYPDVPEDLHRHQVIGWTEDLTYLAMANWLASHCPGVRPSLRLTSFAAQAEAVRQGAGWAVLPD
FIAVPAGFAPGMPDLFRSESELWLLTHAQSRALQRVNLVRDRVIVAIREELNQLQPQHSA
>Mature_140_residues
MIRFGLYASEDYVRRNGYPDVPEDLHRHQVIGWTEDLTYLAMANWLASHCPGVRPSLRLTSFAAQAEAVRQGAGWAVLPD
FIAVPAGFAPGMPDLFRSESELWLLTHAQSRALQRVNLVRDRVIVAIREELNQLQPQHSA

Specific function: Unknown

COG id: COG0583

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15791; Mature: 15791

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRFGLYASEDYVRRNGYPDVPEDLHRHQVIGWTEDLTYLAMANWLASHCPGVRPSLRLT
CEEECCCCCHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCHHHH
SFAAQAEAVRQGAGWAVLPDFIAVPAGFAPGMPDLFRSESELWLLTHAQSRALQRVNLVR
HHHHHHHHHHHCCCCEECHHHHHCCCCCCCCCHHHHCCCCCEEEEECHHHHHHHHHHHHH
DRVIVAIREELNQLQPQHSA
HHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MIRFGLYASEDYVRRNGYPDVPEDLHRHQVIGWTEDLTYLAMANWLASHCPGVRPSLRLT
CEEECCCCCHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCHHHH
SFAAQAEAVRQGAGWAVLPDFIAVPAGFAPGMPDLFRSESELWLLTHAQSRALQRVNLVR
HHHHHHHHHHHCCCCEECHHHHHCCCCCCCCCHHHHCCCCCEEEEECHHHHHHHHHHHHH
DRVIVAIREELNQLQPQHSA
HHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA