Definition Paracoccus denitrificans PD1222 chromosome 2, complete sequence.
Accession NC_008687
Length 1,730,097

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The map label for this gene is 119385790

Identifier: 119385790

GI number: 119385790

Start: 247372

End: 248271

Strand: Direct

Name: 119385790

Synonym: Pden_3068

Alternate gene names: NA

Gene position: 247372-248271 (Clockwise)

Preceding gene: 119385789

Following gene: 119385791

Centisome position: 14.3

GC content: 64.44

Gene sequence:

>900_bases
ATGACCAATACGCCGGATTTGCTACGACTGATCGCGACAGTCTTCATCGCGGTGACCTGCGTGGTCATCGGAGATACGGC
GGGCAAACTGCTGACCGGCGGCGGGGTGGATCCCTTTATCGTGGCATGGTCGCGGTTCCTCCTGGCCGCGCTGATGCTGC
TTCCGTTCAGCGGATTGACCCGGCAGGAACTGCCGGCCTTGCTGGACTGGCGCGTTCTGCTGAGGGCGGGATTCATCGTT
TGCGGGATCTGCTGCATCCTGACGGCCCTGAAGACGGAACCGATCGCCAATGTCTTCGGAGCCTTCTTCGTCGGCCCGGT
CGTGTCCTATGTCCTGGCGATCCTGTTTCTGGGCGAGCGGCCATCGGCGCAGAGAAGTCTCCTGCTGGGACTTGGCTTCG
CCGGCGTGATGCTTGTGGTGAAACCCGGTTTCGGCAGCTCCGCCGGCATGGCTTTCGCCCTGGCGGCGGGAACATTCTAC
GGCGCCTATCTGGTCATGACCCGCACCCTGGCGGGAGCCTTCCGGCCGCGCTTCCTGCTGATCTCGCAACTGCTGATCGG
AGCCGTGGTCCTGACGCCCTTCGGCCTGCAATCCGATTTTCCCGTGCCGGACATGCTCCTGCTTGCGCTTCTTCTGGTCA
GCGCCGTCGGCTCGGCCCTGGGCAACTTCCTGCTGGTGATGGCCAGCAGGAAGGCCGAGGCCAGTCTGATCGCGCCCCTG
GTCTACAGCCAGCTGATTTCGGCCACGGCACTCGGGATTGTCGTCTTCGGCGATTGGCCCGATCTCGTATCACTGGCGGG
GCTGGTGCTGATCGCGATCTCGGGGCTGGGCTCGCTGCTGGTTCACCAGCGTGCGGGCAGGGGGCGCCTATCGACCCCGC
CTTACCCACGTACGCCGTGA

Upstream 100 bases:

>100_bases
TCGGGACTGTCGGGACGGTGGCCTTCCAATCCTTCGCGCAACGTCGCAAGGTCTGCCCCGAACCAGATGCCCGCCTCAAT
TCCGCTTCCCGAGAACGATC

Downstream 100 bases:

>100_bases
TGTCGCTGGACGTCTGGAACCGTCGGCATGGAACCTCGGTAATCCTGCGACGGCGAAAGTAGACGCGGTCCCGCTGTCTT
CCGCAGGCGCCTTTGCGCGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 299; Mature: 298

Protein sequence:

>299_residues
MTNTPDLLRLIATVFIAVTCVVIGDTAGKLLTGGGVDPFIVAWSRFLLAALMLLPFSGLTRQELPALLDWRVLLRAGFIV
CGICCILTALKTEPIANVFGAFFVGPVVSYVLAILFLGERPSAQRSLLLGLGFAGVMLVVKPGFGSSAGMAFALAAGTFY
GAYLVMTRTLAGAFRPRFLLISQLLIGAVVLTPFGLQSDFPVPDMLLLALLLVSAVGSALGNFLLVMASRKAEASLIAPL
VYSQLISATALGIVVFGDWPDLVSLAGLVLIAISGLGSLLVHQRAGRGRLSTPPYPRTP

Sequences:

>Translated_299_residues
MTNTPDLLRLIATVFIAVTCVVIGDTAGKLLTGGGVDPFIVAWSRFLLAALMLLPFSGLTRQELPALLDWRVLLRAGFIV
CGICCILTALKTEPIANVFGAFFVGPVVSYVLAILFLGERPSAQRSLLLGLGFAGVMLVVKPGFGSSAGMAFALAAGTFY
GAYLVMTRTLAGAFRPRFLLISQLLIGAVVLTPFGLQSDFPVPDMLLLALLLVSAVGSALGNFLLVMASRKAEASLIAPL
VYSQLISATALGIVVFGDWPDLVSLAGLVLIAISGLGSLLVHQRAGRGRLSTPPYPRTP
>Mature_298_residues
TNTPDLLRLIATVFIAVTCVVIGDTAGKLLTGGGVDPFIVAWSRFLLAALMLLPFSGLTRQELPALLDWRVLLRAGFIVC
GICCILTALKTEPIANVFGAFFVGPVVSYVLAILFLGERPSAQRSLLLGLGFAGVMLVVKPGFGSSAGMAFALAAGTFYG
AYLVMTRTLAGAFRPRFLLISQLLIGAVVLTPFGLQSDFPVPDMLLLALLLVSAVGSALGNFLLVMASRKAEASLIAPLV
YSQLISATALGIVVFGDWPDLVSLAGLVLIAISGLGSLLVHQRAGRGRLSTPPYPRTP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31360; Mature: 31229

Theoretical pI: Translated: 9.85; Mature: 9.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNTPDLLRLIATVFIAVTCVVIGDTAGKLLTGGGVDPFIVAWSRFLLAALMLLPFSGLT
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHCCCCCC
RQELPALLDWRVLLRAGFIVCGICCILTALKTEPIANVFGAFFVGPVVSYVLAILFLGER
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
PSAQRSLLLGLGFAGVMLVVKPGFGSSAGMAFALAAGTFYGAYLVMTRTLAGAFRPRFLL
CCHHHHHHHHHHHHHEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ISQLLIGAVVLTPFGLQSDFPVPDMLLLALLLVSAVGSALGNFLLVMASRKAEASLIAPL
HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
VYSQLISATALGIVVFGDWPDLVSLAGLVLIAISGLGSLLVHQRAGRGRLSTPPYPRTP
HHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TNTPDLLRLIATVFIAVTCVVIGDTAGKLLTGGGVDPFIVAWSRFLLAALMLLPFSGLT
CCCHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHCCCCCC
RQELPALLDWRVLLRAGFIVCGICCILTALKTEPIANVFGAFFVGPVVSYVLAILFLGER
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
PSAQRSLLLGLGFAGVMLVVKPGFGSSAGMAFALAAGTFYGAYLVMTRTLAGAFRPRFLL
CCHHHHHHHHHHHHHEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ISQLLIGAVVLTPFGLQSDFPVPDMLLLALLLVSAVGSALGNFLLVMASRKAEASLIAPL
HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
VYSQLISATALGIVVFGDWPDLVSLAGLVLIAISGLGSLLVHQRAGRGRLSTPPYPRTP
HHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA