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The map label for this gene is ygbN [H]

Identifier: 119385656

GI number: 119385656

Start: 93763

End: 95139

Strand: Direct

Name: ygbN [H]

Synonym: Pden_2931

Alternate gene names: 119385656

Gene position: 93763-95139 (Clockwise)

Preceding gene: 119385655

Following gene: 119385657

Centisome position: 5.42

GC content: 68.99

Gene sequence:

>1377_bases
ATGAATCCTGTCGAGCCCGTCCACAGCACGCCGGTGCTTTTGCTTATCGCCGCCGCAGCGGTGCTGGTGCTGCTGGTGTT
CATCATGCGGTTCCGGCTGCATGCCTTTGTCTCGCTGGTGCTGGTCAGCCTGCTGACCGCGATCGTCGCCGGCATTCCCA
TGGGCGACGTGATCCCGACGCTGCTGCAGGGCTTTGGCTCGACGCTGGCCACGGTGGCGCTGCTGGTGGGCTTTGGCGCC
ATGATCGGGCGGCTGTTGGAGATCACCGGCGGCGCGCAGGTGCTGGCGGACCGGCTGATCGGCCAGTTCGGCGCCGAGCG
CGCGCCTTTCGCGCTGGGCGTGGCCTCGCTGCTGTTCGGCTTTCCGATCTTCTTCGATGCCGGGCTGGTGGTGATGCTGC
CGATCATCTTCAGCGTGGCCTACCGCTTTGGCGGCTCGGTGCTGCTTTACGCGCTGCCGGCGGCGGGGGCCTTTGCGGCC
ATGCACGCGCTGTTGCCGCCGCATCCGGGGCCGGTGGCGGCGGGCGATCTGCTGGGCGCGGATATCGGGCTTCTGGTGCT
GGTCGGGCTGGCCGTGGCGCTGCCGACCTGGTTCTTCGGCAGCTATCTGTTCGGGCTGTGGGCCGGGCGGCGCTTCGTGC
TGCCGATCCCGCAGATCCTGGGCGCGGTCGACGCCGGCAGCCATGACCGCAACCCGCCGAGCTTTGGCACCGTGATGCTG
GTGCTGCTGCTGCCGCTGGCGCTGATCTTCCTGAATACCGGGCTGGGCACGCTGGCGACCATGGGCGTGGTCGACGGCGG
TGCGGGCTGGGTCACGGTCCTGCGGCTGATCGGGCAGACGCCCATCGCGCTGCTCATCACCGTGCTGGTCGCCATGGCGC
TGCTGGGCCGGGGCCGCAACGCGGCCGAGATCGAAAAGATCATGGACGGCGCGCTGGCGCCGATCTGTGCCATCATCCTG
GTCACCGGCGCGGGCGGCATGTTCGGCGGCGTGCTGCGCGCCAGCGGCATCGGCGAGGCGCTGGCCGGCAGCCTGGACGC
CATCGGCATGCCGCTGATCGTCGCGGCCTTTGTCATCTCGATGGCGCTGCGGGTGGCGCAGGGCTCGGCCACGGTGGCCC
TGACCACTACGGCCGGGCTGATCGCGCCCACGGTGGCGGCGACAACGGGCCTGAGCGAATTCGACCGCTGCTTCCTGGTG
GTGGCCATCGCCGGCGGCGCCACGGTGCTGAGCCATTTCAACGATTCCGGCTTCTGGTTGGTCGGGCGGTTCCTGGAGAT
GGATGAAAAGACCACGCTGAAGACCTGGACGGTGATGGAGACGCTGCTGGGCACCATCGCCTTCGGTTTTGCGCTGCTTG
GCTGGTGGCTGCTGTGA

Upstream 100 bases:

>100_bases
CTGTTAACGCTAACATCCAAGTCCGCCGCGAATCCGGGGAGGAGGGGCGGCGAAACCAGATCACAGGCTGACCCAAGTCC
ATTCCGCCGGAGGAGTTTTC

Downstream 100 bases:

>100_bases
AGGGCGTGGTGCAGCATATCGTGGTGATGGGCGTCTCGGGCGCCGGGAAAAGCACCACGGGCGAGGCGCTGGCCCGGCAC
CTGGGCTGGCCCTTCGTCGA

Product: gluconate transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 458; Mature: 458

Protein sequence:

>458_residues
MNPVEPVHSTPVLLLIAAAAVLVLLVFIMRFRLHAFVSLVLVSLLTAIVAGIPMGDVIPTLLQGFGSTLATVALLVGFGA
MIGRLLEITGGAQVLADRLIGQFGAERAPFALGVASLLFGFPIFFDAGLVVMLPIIFSVAYRFGGSVLLYALPAAGAFAA
MHALLPPHPGPVAAGDLLGADIGLLVLVGLAVALPTWFFGSYLFGLWAGRRFVLPIPQILGAVDAGSHDRNPPSFGTVML
VLLLPLALIFLNTGLGTLATMGVVDGGAGWVTVLRLIGQTPIALLITVLVAMALLGRGRNAAEIEKIMDGALAPICAIIL
VTGAGGMFGGVLRASGIGEALAGSLDAIGMPLIVAAFVISMALRVAQGSATVALTTTAGLIAPTVAATTGLSEFDRCFLV
VAIAGGATVLSHFNDSGFWLVGRFLEMDEKTTLKTWTVMETLLGTIAFGFALLGWWLL

Sequences:

>Translated_458_residues
MNPVEPVHSTPVLLLIAAAAVLVLLVFIMRFRLHAFVSLVLVSLLTAIVAGIPMGDVIPTLLQGFGSTLATVALLVGFGA
MIGRLLEITGGAQVLADRLIGQFGAERAPFALGVASLLFGFPIFFDAGLVVMLPIIFSVAYRFGGSVLLYALPAAGAFAA
MHALLPPHPGPVAAGDLLGADIGLLVLVGLAVALPTWFFGSYLFGLWAGRRFVLPIPQILGAVDAGSHDRNPPSFGTVML
VLLLPLALIFLNTGLGTLATMGVVDGGAGWVTVLRLIGQTPIALLITVLVAMALLGRGRNAAEIEKIMDGALAPICAIIL
VTGAGGMFGGVLRASGIGEALAGSLDAIGMPLIVAAFVISMALRVAQGSATVALTTTAGLIAPTVAATTGLSEFDRCFLV
VAIAGGATVLSHFNDSGFWLVGRFLEMDEKTTLKTWTVMETLLGTIAFGFALLGWWLL
>Mature_458_residues
MNPVEPVHSTPVLLLIAAAAVLVLLVFIMRFRLHAFVSLVLVSLLTAIVAGIPMGDVIPTLLQGFGSTLATVALLVGFGA
MIGRLLEITGGAQVLADRLIGQFGAERAPFALGVASLLFGFPIFFDAGLVVMLPIIFSVAYRFGGSVLLYALPAAGAFAA
MHALLPPHPGPVAAGDLLGADIGLLVLVGLAVALPTWFFGSYLFGLWAGRRFVLPIPQILGAVDAGSHDRNPPSFGTVML
VLLLPLALIFLNTGLGTLATMGVVDGGAGWVTVLRLIGQTPIALLITVLVAMALLGRGRNAAEIEKIMDGALAPICAIIL
VTGAGGMFGGVLRASGIGEALAGSLDAIGMPLIVAAFVISMALRVAQGSATVALTTTAGLIAPTVAATTGLSEFDRCFLV
VAIAGGATVLSHFNDSGFWLVGRFLEMDEKTTLKTWTVMETLLGTIAFGFALLGWWLL

Specific function: Unknown

COG id: COG2610

COG function: function code GE; H+/gluconate symporter and related permeases

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gntP permease family [H]

Homologues:

Organism=Escherichia coli, GI1789097, Length=451, Percent_Identity=39.9113082039911, Blast_Score=265, Evalue=6e-72,
Organism=Escherichia coli, GI48994939, Length=440, Percent_Identity=36.8181818181818, Blast_Score=234, Evalue=7e-63,
Organism=Escherichia coli, GI48994935, Length=432, Percent_Identity=34.2592592592593, Blast_Score=227, Evalue=1e-60,
Organism=Escherichia coli, GI1790716, Length=437, Percent_Identity=33.4096109839817, Blast_Score=217, Evalue=1e-57,
Organism=Escherichia coli, GI1790776, Length=421, Percent_Identity=31.353919239905, Blast_Score=204, Evalue=1e-53,
Organism=Escherichia coli, GI2367370, Length=427, Percent_Identity=31.615925058548, Blast_Score=188, Evalue=5e-49,
Organism=Escherichia coli, GI1788707, Length=421, Percent_Identity=28.0285035629454, Blast_Score=160, Evalue=2e-40,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003474 [H]

Pfam domain/function: PF02447 GntP_permease [H]

EC number: NA

Molecular weight: Translated: 47216; Mature: 47216

Theoretical pI: Translated: 6.24; Mature: 6.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNPVEPVHSTPVLLLIAAAAVLVLLVFIMRFRLHAFVSLVLVSLLTAIVAGIPMGDVIPT
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
LLQGFGSTLATVALLVGFGAMIGRLLEITGGAQVLADRLIGQFGAERAPFALGVASLLFG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
FPIFFDAGLVVMLPIIFSVAYRFGGSVLLYALPAAGAFAAMHALLPPHPGPVAAGDLLGA
HHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHCCCCCCCCCHHHHHHH
DIGLLVLVGLAVALPTWFFGSYLFGLWAGRRFVLPIPQILGAVDAGSHDRNPPSFGTVML
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHCCCCCCCCCCCHHHHHHH
VLLLPLALIFLNTGLGTLATMGVVDGGAGWVTVLRLIGQTPIALLITVLVAMALLGRGRN
HHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCC
AAEIEKIMDGALAPICAIILVTGAGGMFGGVLRASGIGEALAGSLDAIGMPLIVAAFVIS
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHCCHHHCCHHHHHHHHHHH
MALRVAQGSATVALTTTAGLIAPTVAATTGLSEFDRCFLVVAIAGGATVLSHFNDSGFWL
HHHHHHCCCCEEEEEEHHHHHHHHHHHHCCHHHHHHHHHHEEECCCHHHHHHCCCCCHHH
VGRFLEMDEKTTLKTWTVMETLLGTIAFGFALLGWWLL
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MNPVEPVHSTPVLLLIAAAAVLVLLVFIMRFRLHAFVSLVLVSLLTAIVAGIPMGDVIPT
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
LLQGFGSTLATVALLVGFGAMIGRLLEITGGAQVLADRLIGQFGAERAPFALGVASLLFG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
FPIFFDAGLVVMLPIIFSVAYRFGGSVLLYALPAAGAFAAMHALLPPHPGPVAAGDLLGA
HHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHCCCCCCCCCHHHHHHH
DIGLLVLVGLAVALPTWFFGSYLFGLWAGRRFVLPIPQILGAVDAGSHDRNPPSFGTVML
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHCCCCCCCCCCCHHHHHHH
VLLLPLALIFLNTGLGTLATMGVVDGGAGWVTVLRLIGQTPIALLITVLVAMALLGRGRN
HHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCC
AAEIEKIMDGALAPICAIILVTGAGGMFGGVLRASGIGEALAGSLDAIGMPLIVAAFVIS
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHCCHHHCCHHHHHHHHHHH
MALRVAQGSATVALTTTAGLIAPTVAATTGLSEFDRCFLVVAIAGGATVLSHFNDSGFWL
HHHHHHCCCCEEEEEEHHHHHHHHHHHHCCHHHHHHHHHHEEECCCHHHHHHCCCCCHHH
VGRFLEMDEKTTLKTWTVMETLLGTIAFGFALLGWWLL
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]