| Definition | Paracoccus denitrificans PD1222 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_008687 |
| Length | 1,730,097 |
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The map label for this gene is gntK [H]
Identifier: 119385657
GI number: 119385657
Start: 95148
End: 95651
Strand: Direct
Name: gntK [H]
Synonym: Pden_2932
Alternate gene names: 119385657
Gene position: 95148-95651 (Clockwise)
Preceding gene: 119385656
Following gene: 119385664
Centisome position: 5.5
GC content: 70.24
Gene sequence:
>504_bases GTGCAGCATATCGTGGTGATGGGCGTCTCGGGCGCCGGGAAAAGCACCACGGGCGAGGCGCTGGCCCGGCACCTGGGCTG GCCCTTCGTCGAGGGCGACAGCTTTCACCCCGAGGCCAATGTCGCCAAGATGCGCGACGGCATTCCGCTGGACGACGGCG ACCGCGAGCCCTGGCTGCGGGCGCTGGCCGCCGAGATCGCGCGGAACGAGGCGCGGGGCCAGTCCTCGGTCATGGGCTGT TCGTCGCTGAAGCGGGCCTATCGCGACATCCTGCGCCAGGGGGCGCCGGTGGTGCGCTTCGTGCATGTGCATGGCTCGCG CGCGTTGCTGGAAAGCCGGCTGTCGCATCGCGCGGGGCATTTCTTCCCGGCCAAGCTGCTGGATTCGCAGCTGGCGACGC TGGAGCCGCTGGCACCTGACGAGGACGGCGTCGTGGTCGACATGGCCCTGTCGGTCGAGGATCAGTTGCACCAGGCCCTG CGCCTGCTGGGGCTTGGGGGCTGA
Upstream 100 bases:
>100_bases AAAAGACCACGCTGAAGACCTGGACGGTGATGGAGACGCTGCTGGGCACCATCGCCTTCGGTTTTGCGCTGCTTGGCTGG TGGCTGCTGTGAAGGGCGTG
Downstream 100 bases:
>100_bases AACGAAGCGAGCGCCGTGCCCGCGAAGCGGGGGGCGGCCTTGCCCGAAATGCCGGCCGCGGCAAAGCCGCGGGACGTGTC GCGGGCAGGTGAGCCGACTT
Product: carbohydrate kinase
Products: NA
Alternate protein names: Gluconate kinase 2 [H]
Number of amino acids: Translated: 167; Mature: 167
Protein sequence:
>167_residues MQHIVVMGVSGAGKSTTGEALARHLGWPFVEGDSFHPEANVAKMRDGIPLDDGDREPWLRALAAEIARNEARGQSSVMGC SSLKRAYRDILRQGAPVVRFVHVHGSRALLESRLSHRAGHFFPAKLLDSQLATLEPLAPDEDGVVVDMALSVEDQLHQAL RLLGLGG
Sequences:
>Translated_167_residues MQHIVVMGVSGAGKSTTGEALARHLGWPFVEGDSFHPEANVAKMRDGIPLDDGDREPWLRALAAEIARNEARGQSSVMGC SSLKRAYRDILRQGAPVVRFVHVHGSRALLESRLSHRAGHFFPAKLLDSQLATLEPLAPDEDGVVVDMALSVEDQLHQAL RLLGLGG >Mature_167_residues MQHIVVMGVSGAGKSTTGEALARHLGWPFVEGDSFHPEANVAKMRDGIPLDDGDREPWLRALAAEIARNEARGQSSVMGC SSLKRAYRDILRQGAPVVRFVHVHGSRALLESRLSHRAGHFFPAKLLDSQLATLEPLAPDEDGVVVDMALSVEDQLHQAL RLLGLGG
Specific function: Gluconate utilization system GNT-I. [C]
COG id: COG3265
COG function: function code G; Gluconate kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the gluconokinase gntK/gntV family [H]
Homologues:
Organism=Homo sapiens, GI299758445, Length=180, Percent_Identity=41.6666666666667, Blast_Score=136, Evalue=8e-33, Organism=Escherichia coli, GI87082265, Length=166, Percent_Identity=40.9638554216867, Blast_Score=129, Evalue=7e-32, Organism=Escherichia coli, GI1790719, Length=163, Percent_Identity=41.1042944785276, Blast_Score=127, Evalue=3e-31, Organism=Caenorhabditis elegans, GI25146487, Length=163, Percent_Identity=46.6257668711656, Blast_Score=137, Evalue=2e-33, Organism=Saccharomyces cerevisiae, GI6320454, Length=148, Percent_Identity=40.5405405405405, Blast_Score=107, Evalue=1e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000623 - InterPro: IPR006001 [H]
Pfam domain/function: PF01202 SKI [H]
EC number: =2.7.1.12 [H]
Molecular weight: Translated: 18062; Mature: 18062
Theoretical pI: Translated: 6.72; Mature: 6.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQHIVVMGVSGAGKSTTGEALARHLGWPFVEGDSFHPEANVAKMRDGIPLDDGDREPWLR CCEEEEEEECCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCHHHH ALAAEIARNEARGQSSVMGCSSLKRAYRDILRQGAPVVRFVHVHGSRALLESRLSHRAGH HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHCCC FFPAKLLDSQLATLEPLAPDEDGVVVDMALSVEDQLHQALRLLGLGG CCHHHHHHHHHHHCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MQHIVVMGVSGAGKSTTGEALARHLGWPFVEGDSFHPEANVAKMRDGIPLDDGDREPWLR CCEEEEEEECCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCHHHH ALAAEIARNEARGQSSVMGCSSLKRAYRDILRQGAPVVRFVHVHGSRALLESRLSHRAGH HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHCCC FFPAKLLDSQLATLEPLAPDEDGVVVDMALSVEDQLHQALRLLGLGG CCHHHHHHHHHHHCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9135111; 9278503; 8655507; 11468405 [H]