Click here to switch to the map view.

The map label for this gene is bioC [H]

Identifier: 119385646

GI number: 119385646

Start: 83833

End: 84576

Strand: Direct

Name: bioC [H]

Synonym: Pden_2921

Alternate gene names: 119385646

Gene position: 83833-84576 (Clockwise)

Preceding gene: 119385645

Following gene: 119385654

Centisome position: 4.85

GC content: 75.13

Gene sequence:

>744_bases
ATGAACGCGCTGGCCGGGCGGGTGGCGCGGTCATTCGCGCGCGGCATGAAAACCTATGACGGCGCGGCGCTGGCGCAGCG
GCAGATCGCGGCGCGGCTGTTCGCAGCCTATCGCGGCGCGGCGGCGGGGCATCGCCCGGCAAGGGTGCTGGAGGCGGGTT
ATGGCTCGGGCCACCTGACCCGGCACCTGCTGGAGTTGCGGCCCCGGCGGCTGTGGCTGAACGACCTGGCGGCGCCGGAA
TTGCCGGGGGTCGCGGCGGAATACCTGCCGGGCGACGTGGCCGAGGTGGCGTTGCCCGAGGCGGTGGACCTGGCGGCCTC
GGCCTCGACGATCCAATGGGTTGCCGATCCGGCGCGGGTCCTGGGCCGGCTGTGCCAGGCGGTGGCGCCGGGGGGCTGGC
TGGCGATCTCGGGCTTTGCGCCGGGGCATTTTCCCGAATTGCGGGCCCTGGGCAGCCGGGCGGCGGCGCCGTCCTATCTG
GCCGGGGCAGGGATGGCGGCGCTGCTGCCGGCGGGCTGGCGGGTCCGCGGCGCGGGGGAATGGCGCGTCAGGCTGCATTT
CCCCGGCGCGCTGGAGGTGCTGCGCCATCTGCGCGCCACCGGGGTCAACGGTTGCGCGGGGCAGTTCCGTTCGCCGGGCG
CGCTGCGGGATTTCATGGCGCGCTACGAGGCGCAGCATGGCGGGGCGGGGGGCGTCGCGCTGACCTATGTCGCAAGCTGG
CTGGTGGCGGAGCGGCGCGCCTAG

Upstream 100 bases:

>100_bases
ACCTGATCCGCGCCTGGCAGGCATGGCCGGTCGAGACCCGGGTGCTGGATTGCGGGCACAACCCCTTTGCGCTGTGGCGC
GACTGGGACGAGGTGCTGGC

Downstream 100 bases:

>100_bases
CCGTGGATGGCGAAGGCGTCGGGCTTGCCGCTGGTCGAGGGCGCCGGGCGGCGGCCGATCCAGCGCACATGGCGCGCCAG
CGTGGCGCAGGCGGTGTCCA

Product: methyltransferase type 11

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 247; Mature: 247

Protein sequence:

>247_residues
MNALAGRVARSFARGMKTYDGAALAQRQIAARLFAAYRGAAAGHRPARVLEAGYGSGHLTRHLLELRPRRLWLNDLAAPE
LPGVAAEYLPGDVAEVALPEAVDLAASASTIQWVADPARVLGRLCQAVAPGGWLAISGFAPGHFPELRALGSRAAAPSYL
AGAGMAALLPAGWRVRGAGEWRVRLHFPGALEVLRHLRATGVNGCAGQFRSPGALRDFMARYEAQHGGAGGVALTYVASW
LVAERRA

Sequences:

>Translated_247_residues
MNALAGRVARSFARGMKTYDGAALAQRQIAARLFAAYRGAAAGHRPARVLEAGYGSGHLTRHLLELRPRRLWLNDLAAPE
LPGVAAEYLPGDVAEVALPEAVDLAASASTIQWVADPARVLGRLCQAVAPGGWLAISGFAPGHFPELRALGSRAAAPSYL
AGAGMAALLPAGWRVRGAGEWRVRLHFPGALEVLRHLRATGVNGCAGQFRSPGALRDFMARYEAQHGGAGGVALTYVASW
LVAERRA
>Mature_247_residues
MNALAGRVARSFARGMKTYDGAALAQRQIAARLFAAYRGAAAGHRPARVLEAGYGSGHLTRHLLELRPRRLWLNDLAAPE
LPGVAAEYLPGDVAEVALPEAVDLAASASTIQWVADPARVLGRLCQAVAPGGWLAISGFAPGHFPELRALGSRAAAPSYL
AGAGMAALLPAGWRVRGAGEWRVRLHFPGALEVLRHLRATGVNGCAGQFRSPGALRDFMARYEAQHGGAGGVALTYVASW
LVAERRA

Specific function: BioC is involved in an early, but chemically unexplored, step in the conversion of pimelic acid to biotin [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011814
- InterPro:   IPR013216 [H]

Pfam domain/function: PF08241 Methyltransf_11 [H]

EC number: NA

Molecular weight: Translated: 26014; Mature: 26014

Theoretical pI: Translated: 11.09; Mature: 11.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNALAGRVARSFARGMKTYDGAALAQRQIAARLFAAYRGAAAGHRPARVLEAGYGSGHLT
CCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCHHHH
RHLLELRPRRLWLNDLAAPELPGVAAEYLPGDVAEVALPEAVDLAASASTIQWVADPARV
HHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCHHHHHCCHHHHHHHCHHHHHHHHHHHHH
LGRLCQAVAPGGWLAISGFAPGHFPELRALGSRAAAPSYLAGAGMAALLPAGWRVRGAGE
HHHHHHHHCCCCEEEEECCCCCCCHHHHHHHCCCCCCHHHHHCCHHHHCCCCCEEECCCC
WRVRLHFPGALEVLRHLRATGVNGCAGQFRSPGALRDFMARYEAQHGGAGGVALTYVASW
EEEEEECCCHHHHHHHHHHCCCCCCHHCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHH
LVAERRA
HHHHCCC
>Mature Secondary Structure
MNALAGRVARSFARGMKTYDGAALAQRQIAARLFAAYRGAAAGHRPARVLEAGYGSGHLT
CCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCHHHH
RHLLELRPRRLWLNDLAAPELPGVAAEYLPGDVAEVALPEAVDLAASASTIQWVADPARV
HHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCHHHHHCCHHHHHHHCHHHHHHHHHHHHH
LGRLCQAVAPGGWLAISGFAPGHFPELRALGSRAAAPSYLAGAGMAALLPAGWRVRGAGE
HHHHHHHHCCCCEEEEECCCCCCCHHHHHHHCCCCCCHHHHHCCHHHHCCCCCEEECCCC
WRVRLHFPGALEVLRHLRATGVNGCAGQFRSPGALRDFMARYEAQHGGAGGVALTYVASW
EEEEEECCCHHHHHHHHHHCCCCCCHHCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHH
LVAERRA
HHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]