Definition Paracoccus denitrificans PD1222 chromosome 2, complete sequence.
Accession NC_008687
Length 1,730,097

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The map label for this gene is 119385645

Identifier: 119385645

GI number: 119385645

Start: 83228

End: 83836

Strand: Direct

Name: 119385645

Synonym: Pden_2920

Alternate gene names: NA

Gene position: 83228-83836 (Clockwise)

Preceding gene: 119385644

Following gene: 119385646

Centisome position: 4.81

GC content: 72.41

Gene sequence:

>609_bases
ATGAGGGCGGAATGGCTGCGCCGGGAAGGAGCGCCGGAGCTGATCGTGGTGCTGACCGGCTGGGCGGTCGGGGCGGGGCC
GTTCCGGCATCTGGCCGGGCCGGCCGACGTGCTGGTGCTGTCGGATTACCGCGACCTGTCCGCGCCGGACTGGCCCCAGG
GCTACGCGGCGACGGATCTGGTCGCCTGGTCCTTCGGCGTGGCGGCGGCCTGCCGGCTGCCCGCGCTGGACGGGTTTCGC
CGCAAGGTGGCGGTCTGCGGCTCGTGGGCGCCCTGCGACGACGAACTGGGGATACCGTGCGAGACGGTGCGGGCCACGGC
GGCGAACCTGTCCGAACTATCGCTGCGGCAATTCGCGCGGCGGGCGGAATGCCCCACGGAGCCGGGCGCCGATCCTGCCG
CGCTGGGCGAGGAATTGCGGGCGGTGATGGGCTGGGGCGGCGTGCAGGCGCCGGATTTCGACCGCATCGTGCTGGGCGCC
TCGGACCGCATCTTTCCGCTGAAGAACCTGATCCGCGCCTGGCAGGCATGGCCGGTCGAGACCCGGGTGCTGGATTGCGG
GCACAACCCCTTTGCGCTGTGGCGCGACTGGGACGAGGTGCTGGCATGA

Upstream 100 bases:

>100_bases
GGCCGTTCGGGCGGCTGCTTTACTGCATGCCGCCCTTTGTCGCCGCGCCGGACGAGGTCGCGCGCATCTGCGCCGCGATG
GTCGAGATCGCGGGCTGGCC

Downstream 100 bases:

>100_bases
ACGCGCTGGCCGGGCGGGTGGCGCGGTCATTCGCGCGCGGCATGAAAACCTATGACGGCGCGGCGCTGGCGCAGCGGCAG
ATCGCGGCGCGGCTGTTCGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 202; Mature: 202

Protein sequence:

>202_residues
MRAEWLRREGAPELIVVLTGWAVGAGPFRHLAGPADVLVLSDYRDLSAPDWPQGYAATDLVAWSFGVAAACRLPALDGFR
RKVAVCGSWAPCDDELGIPCETVRATAANLSELSLRQFARRAECPTEPGADPAALGEELRAVMGWGGVQAPDFDRIVLGA
SDRIFPLKNLIRAWQAWPVETRVLDCGHNPFALWRDWDEVLA

Sequences:

>Translated_202_residues
MRAEWLRREGAPELIVVLTGWAVGAGPFRHLAGPADVLVLSDYRDLSAPDWPQGYAATDLVAWSFGVAAACRLPALDGFR
RKVAVCGSWAPCDDELGIPCETVRATAANLSELSLRQFARRAECPTEPGADPAALGEELRAVMGWGGVQAPDFDRIVLGA
SDRIFPLKNLIRAWQAWPVETRVLDCGHNPFALWRDWDEVLA
>Mature_202_residues
MRAEWLRREGAPELIVVLTGWAVGAGPFRHLAGPADVLVLSDYRDLSAPDWPQGYAATDLVAWSFGVAAACRLPALDGFR
RKVAVCGSWAPCDDELGIPCETVRATAANLSELSLRQFARRAECPTEPGADPAALGEELRAVMGWGGVQAPDFDRIVLGA
SDRIFPLKNLIRAWQAWPVETRVLDCGHNPFALWRDWDEVLA

Specific function: Unknown

COG id: COG2830

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22078; Mature: 22078

Theoretical pI: Translated: 4.65; Mature: 4.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRAEWLRREGAPELIVVLTGWAVGAGPFRHLAGPADVLVLSDYRDLSAPDWPQGYAATDL
CCCHHHHHCCCCCEEEEEECCCCCCCCHHHHCCCCCEEEEECCCCCCCCCCCCCCCHHHH
VAWSFGVAAACRLPALDGFRRKVAVCGSWAPCDDELGIPCETVRATAANLSELSLRQFAR
HHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
RAECPTEPGADPAALGEELRAVMGWGGVQAPDFDRIVLGASDRIFPLKNLIRAWQAWPVE
HHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHCCCCC
TRVLDCGHNPFALWRDWDEVLA
EEEEECCCCCCHHCCCHHHHCC
>Mature Secondary Structure
MRAEWLRREGAPELIVVLTGWAVGAGPFRHLAGPADVLVLSDYRDLSAPDWPQGYAATDL
CCCHHHHHCCCCCEEEEEECCCCCCCCHHHHCCCCCEEEEECCCCCCCCCCCCCCCHHHH
VAWSFGVAAACRLPALDGFRRKVAVCGSWAPCDDELGIPCETVRATAANLSELSLRQFAR
HHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
RAECPTEPGADPAALGEELRAVMGWGGVQAPDFDRIVLGASDRIFPLKNLIRAWQAWPVE
HHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHCCCCC
TRVLDCGHNPFALWRDWDEVLA
EEEEECCCCCCHHCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA