| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119358460
Identifier: 119358460
GI number: 119358460
Start: 3088886
End: 3089656
Strand: Reverse
Name: 119358460
Synonym: Cpha266_2696
Alternate gene names: NA
Gene position: 3089656-3088886 (Counterclockwise)
Preceding gene: 119358462
Following gene: 119358459
Centisome position: 98.59
GC content: 52.4
Gene sequence:
>771_bases ATGACTGAAAAGCAACAACAGAAAACCCAACTCGGTATTCTTGTTTTTCACGGTTTTACGGCAACGACCGACAGCGTCTC CCTGCTTGTCGACGCATTACATCGCACCGGAGTGCTGGTACGAGCACCGCTTCTTGCCGGACACGGAGCGTCATCGCCCG AAGCGCTTCGCGGAATCACCTGCACCGATTGGCTGACCGACGCCGAAAAAGCCTTCAGTCAACTCTCCGCTTCATGCGAA AAGATTATTCTTGTCGGTCACAGCATGGGCGCTCTTCTTGCTCTTAACCTTGCCGTGCGACATGAAAGCAGGGTTGATTC CCTTGTCCTCGCCGCCCCGGCAATAAAGCTGTATTCCATATTTTCTCCCGGTCGACCGCTTTATCGTTTTGCGCCGCTTC TTGCAAGAGTGAAAAAAAAATGGGAGATGAAAACCGCAATTGCCGATCGGCGTTATGCCCTGGGCACGGGCCGTTATGCC TGGGTCCCCACCGATACCATTCTCTCTTTTTTCCTCCTGATAGAAAAAACAATATCCGAGCTCGGATCCGTCACTGTCCC GCTCTTTATCCTGCACAACCGAAGGGAAACCACCGTGATGCCTGAAAGCGCGACCATACTATGCAATGCGATAGCGACAG GCGTCTCGAACAAATCAATTGTATGGCTTGAGCACTCGGAACATCAGATGTTCTGCGACAGCGAGAGGGAACTTGCCGTT CGAGCGATAGTGGATTTCGTCGATCGTCGGGTGCATCATAACCGATCCTGA
Upstream 100 bases:
>100_bases AATTATCACTGAGCGGAAATATATTTAAGCAACAAATTTACACAATACAGCGCAACGTATCCGTTCCTCCTTATCTGCCG CTGAAAGATAAACGTGATTC
Downstream 100 bases:
>100_bases CAGATCGTTTTGTTATCGTTTTACGACGGTTATATTCTGTTCCCTTTAACCTTTACAACAGAATATGACTATCATAAAAC CCCGGCTATTCTGCTTTTTT
Product: alpha/beta hydrolase fold
Products: NA
Alternate protein names: MGLP [H]
Number of amino acids: Translated: 256; Mature: 255
Protein sequence:
>256_residues MTEKQQQKTQLGILVFHGFTATTDSVSLLVDALHRTGVLVRAPLLAGHGASSPEALRGITCTDWLTDAEKAFSQLSASCE KIILVGHSMGALLALNLAVRHESRVDSLVLAAPAIKLYSIFSPGRPLYRFAPLLARVKKKWEMKTAIADRRYALGTGRYA WVPTDTILSFFLLIEKTISELGSVTVPLFILHNRRETTVMPESATILCNAIATGVSNKSIVWLEHSEHQMFCDSERELAV RAIVDFVDRRVHHNRS
Sequences:
>Translated_256_residues MTEKQQQKTQLGILVFHGFTATTDSVSLLVDALHRTGVLVRAPLLAGHGASSPEALRGITCTDWLTDAEKAFSQLSASCE KIILVGHSMGALLALNLAVRHESRVDSLVLAAPAIKLYSIFSPGRPLYRFAPLLARVKKKWEMKTAIADRRYALGTGRYA WVPTDTILSFFLLIEKTISELGSVTVPLFILHNRRETTVMPESATILCNAIATGVSNKSIVWLEHSEHQMFCDSERELAV RAIVDFVDRRVHHNRS >Mature_255_residues TEKQQQKTQLGILVFHGFTATTDSVSLLVDALHRTGVLVRAPLLAGHGASSPEALRGITCTDWLTDAEKAFSQLSASCEK IILVGHSMGALLALNLAVRHESRVDSLVLAAPAIKLYSIFSPGRPLYRFAPLLARVKKKWEMKTAIADRRYALGTGRYAW VPTDTILSFFLLIEKTISELGSVTVPLFILHNRRETTVMPESATILCNAIATGVSNKSIVWLEHSEHQMFCDSERELAVR AIVDFVDRRVHHNRS
Specific function: Hydrolyzes monoacylglycerols, with the highest activity occurring with 1-monolauroylglycerol [H]
COG id: COG1647
COG function: function code R; Esterase/lipase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the lipase/esterase LIP3/BchO family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014940 - InterPro: IPR012354 [H]
Pfam domain/function: PF08840 BAAT_C [H]
EC number: =3.1.1.23 [H]
Molecular weight: Translated: 28361; Mature: 28230
Theoretical pI: Translated: 9.25; Mature: 9.25
Prosite motif: PS00120 LIPASE_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEKQQQKTQLGILVFHGFTATTDSVSLLVDALHRTGVLVRAPLLAGHGASSPEALRGIT CCCHHHHHHHEEEEEEECCCCCCHHHHHHHHHHHHCCEEEEECEEECCCCCCHHHHCCCC CTDWLTDAEKAFSQLSASCEKIILVGHSMGALLALNLAVRHESRVDSLVLAAPAIKLYSI HHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FSPGRPLYRFAPLLARVKKKWEMKTAIADRRYALGTGRYAWVPTDTILSFFLLIEKTISE CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCEEECCHHHHHHHHHHHHHHHHH LGSVTVPLFILHNRRETTVMPESATILCNAIATGVSNKSIVWLEHSEHQMFCDSERELAV HCCCEEEEEEEECCCCCEECCCCHHHHHHHHHHCCCCCEEEEEECCCCCEECCCHHHHHH RAIVDFVDRRVHHNRS HHHHHHHHHHHHCCCC >Mature Secondary Structure TEKQQQKTQLGILVFHGFTATTDSVSLLVDALHRTGVLVRAPLLAGHGASSPEALRGIT CCHHHHHHHEEEEEEECCCCCCHHHHHHHHHHHHCCEEEEECEEECCCCCCHHHHCCCC CTDWLTDAEKAFSQLSASCEKIILVGHSMGALLALNLAVRHESRVDSLVLAAPAIKLYSI HHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FSPGRPLYRFAPLLARVKKKWEMKTAIADRRYALGTGRYAWVPTDTILSFFLLIEKTISE CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCEEECCHHHHHHHHHHHHHHHHH LGSVTVPLFILHNRRETTVMPESATILCNAIATGVSNKSIVWLEHSEHQMFCDSERELAV HCCCEEEEEEEECCCCCEECCCCHHHHHHHHHHCCCCCEEEEEECCCCCEECCCHHHHHH RAIVDFVDRRVHHNRS HHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11226879; 10731713 [H]