| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is tal
Identifier: 119358462
GI number: 119358462
Start: 3090408
End: 3091088
Strand: Reverse
Name: tal
Synonym: Cpha266_2698
Alternate gene names: 119358462
Gene position: 3091088-3090408 (Counterclockwise)
Preceding gene: 119358463
Following gene: 119358460
Centisome position: 98.63
GC content: 51.69
Gene sequence:
>681_bases ATGAAATTTTTTATTGATACGGCAAGTCTTGAAGAAATTCAGGCAGCCAAGGATCTTGGCATGCTCGACGGCGTGACGAC GAATCCCTCGCTCATCGCACGAATTGTCGGGGATGCCTCCAGCTTTTCCTATCAGGACTTCAGAGAGCATATCAGACGCA TCGCCGAGATTGCAGACGGACCGGTAAGCGCCGAAGTCACAACGACGGATGCAGAGGAGATGATTCATGAAGGAGAGGCT CTTGCCGCAATTCACGAAAACGTTGTGGTAAAATGTCCCCTCACGATAGATGGTCTCAAAGCCATCCGGCATTTGTCGGA AAAAGGCATTCGTACCAACGCCACGCTGGTATTTTCTCCCAATCAGGCGCTGCTTGCCGCCAAAGCGGGAGCTTCATACG TCAGTCCGTTCGTAGGCCGGCTTGACGATATCAGTACCGAAGGGATGGCGCTTGTCGAACAGATCATCACCATCTACGAT AACTACGGGTATTTGACCGAAGTCATCGTAGCCAGCATCAGGCACCCCCGACACGTTGTCGAGTCTGCGATGATGGGGGC AGACATTGCGACCATTCCGTTCAGTGTTATCCGTCAGCTTGCCAATCATCCGTTGACCGATGCAGGGTTGAAAAAATTCA TGGAAGACGCAGCGATCCTCAAAAAAGAGAGCGACGCGTAA
Upstream 100 bases:
>100_bases TGCCGGATATGCCTATCACAAACGAAACTGGGAAGGGCGTCGGGCAAAAAATTTCAATGCTATGCTTGACCGTCAATCCG TAACAGCCTGAGGAGTCAGA
Downstream 100 bases:
>100_bases AAGAGGATTGTCGAAACGTTGTTGTCGTAACCAGCCGGGCAGGAGATCGACGTTTAAATACAGGTTGCATCCCGATCTCC TCTCATGGCTTCGAAATAAC
Product: putative translaldolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 226; Mature: 226
Protein sequence:
>226_residues MKFFIDTASLEEIQAAKDLGMLDGVTTNPSLIARIVGDASSFSYQDFREHIRRIAEIADGPVSAEVTTTDAEEMIHEGEA LAAIHENVVVKCPLTIDGLKAIRHLSEKGIRTNATLVFSPNQALLAAKAGASYVSPFVGRLDDISTEGMALVEQIITIYD NYGYLTEVIVASIRHPRHVVESAMMGADIATIPFSVIRQLANHPLTDAGLKKFMEDAAILKKESDA
Sequences:
>Translated_226_residues MKFFIDTASLEEIQAAKDLGMLDGVTTNPSLIARIVGDASSFSYQDFREHIRRIAEIADGPVSAEVTTTDAEEMIHEGEA LAAIHENVVVKCPLTIDGLKAIRHLSEKGIRTNATLVFSPNQALLAAKAGASYVSPFVGRLDDISTEGMALVEQIITIYD NYGYLTEVIVASIRHPRHVVESAMMGADIATIPFSVIRQLANHPLTDAGLKKFMEDAAILKKESDA >Mature_226_residues MKFFIDTASLEEIQAAKDLGMLDGVTTNPSLIARIVGDASSFSYQDFREHIRRIAEIADGPVSAEVTTTDAEEMIHEGEA LAAIHENVVVKCPLTIDGLKAIRHLSEKGIRTNATLVFSPNQALLAAKAGASYVSPFVGRLDDISTEGMALVEQIITIYD NYGYLTEVIVASIRHPRHVVESAMMGADIATIPFSVIRQLANHPLTDAGLKKFMEDAAILKKESDA
Specific function: Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
COG id: COG0176
COG function: function code G; Transaldolase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transaldolase family. Type 3B subfamily
Homologues:
Organism=Escherichia coli, GI87081788, Length=216, Percent_Identity=32.8703703703704, Blast_Score=116, Evalue=1e-27, Organism=Escherichia coli, GI1790382, Length=217, Percent_Identity=34.1013824884793, Blast_Score=108, Evalue=3e-25, Organism=Escherichia coli, GI1786189, Length=234, Percent_Identity=27.7777777777778, Blast_Score=74, Evalue=7e-15, Organism=Escherichia coli, GI1788807, Length=222, Percent_Identity=27.027027027027, Blast_Score=67, Evalue=1e-12, Organism=Caenorhabditis elegans, GI25153750, Length=174, Percent_Identity=29.8850574712644, Blast_Score=73, Evalue=1e-13, Organism=Saccharomyces cerevisiae, GI6321480, Length=256, Percent_Identity=28.515625, Blast_Score=75, Evalue=6e-15, Organism=Drosophila melanogaster, GI45549185, Length=174, Percent_Identity=29.8850574712644, Blast_Score=72, Evalue=4e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): TAL_CHLPD (A1BJV5)
Other databases:
- EMBL: CP000492 - RefSeq: YP_913106.1 - ProteinModelPortal: A1BJV5 - SMR: A1BJV5 - STRING: A1BJV5 - GeneID: 4569994 - GenomeReviews: CP000492_GR - KEGG: cph:Cpha266_2698 - NMPDR: fig|290317.7.peg.2819 - eggNOG: COG0176 - HOGENOM: HBG533000 - OMA: IHKNIVI - ProtClustDB: PRK01362 - GO: GO:0005737 - HAMAP: MF_00494 - InterPro: IPR013785 - InterPro: IPR001585 - InterPro: IPR004731 - InterPro: IPR022999 - InterPro: IPR018225 - Gene3D: G3DSA:3.20.20.70 - PANTHER: PTHR10683 - TIGRFAMs: TIGR00875
Pfam domain/function: PF00923 Transaldolase
EC number: =2.2.1.2
Molecular weight: Translated: 24497; Mature: 24497
Theoretical pI: Translated: 4.74; Mature: 4.74
Prosite motif: PS01054 TRANSALDOLASE_1; PS00958 TRANSALDOLASE_2
Important sites: ACT_SITE 91-91
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFFIDTASLEEIQAAKDLGMLDGVTTNPSLIARIVGDASSFSYQDFREHIRRIAEIADG CEEEECCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCC PVSAEVTTTDAEEMIHEGEALAAIHENVVVKCPLTIDGLKAIRHLSEKGIRTNATLVFSP CCCCEEECCCHHHHHHCCHHHHHHHCCEEEECCCCHHHHHHHHHHHHCCCCCCCEEEECC NQALLAAKAGASYVSPFVGRLDDISTEGMALVEQIITIYDNYGYLTEVIVASIRHPRHVV CCCEEHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHH ESAMMGADIATIPFSVIRQLANHPLTDAGLKKFMEDAAILKKESDA HHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MKFFIDTASLEEIQAAKDLGMLDGVTTNPSLIARIVGDASSFSYQDFREHIRRIAEIADG CEEEECCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCC PVSAEVTTTDAEEMIHEGEALAAIHENVVVKCPLTIDGLKAIRHLSEKGIRTNATLVFSP CCCCEEECCCHHHHHHCCHHHHHHHCCEEEECCCCHHHHHHHHHHHHCCCCCCCEEEECC NQALLAAKAGASYVSPFVGRLDDISTEGMALVEQIITIYDNYGYLTEVIVASIRHPRHVV CCCEEHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHH ESAMMGADIATIPFSVIRQLANHPLTDAGLKKFMEDAAILKKESDA HHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA