| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is phoA [H]
Identifier: 119358457
GI number: 119358457
Start: 3086482
End: 3087987
Strand: Reverse
Name: phoA [H]
Synonym: Cpha266_2693
Alternate gene names: 119358457
Gene position: 3087987-3086482 (Counterclockwise)
Preceding gene: 119358458
Following gene: 119358456
Centisome position: 98.53
GC content: 53.25
Gene sequence:
>1506_bases ATGCGACATTTTCTGACGAACAGAACAAAAAGAATCGCGCTGTTTTCATCAGCGCTGTTCGTTCTCATATTGCTGTCGGC TCCGCTCGATGCCGCATCGCGGAGGACAACGAAACCCGCAGGCGCTCCTCGCTATATCTTTCTCTTTATCGGCGACGGGA TGGGGCTCGCACAGGCGGCACTCTCCGATGCGATGCGAGAAAGGGGCACCCCTGGGCTGGTGATGAACACATTCCCTTCA ATCGGCATCGCAACCACCCATGCCGAAAACCGTTTCATTACCGATTCCGGAGCGGCCGGAACAGCGCTTGCTACCGGAAG CAAGACGAGCATCGGGACTATTTCCATGGCCGCAAATCATAACGATACGCTCAGAACCATTGCCGAAATGGTGAAAGCGA AAGGCATGAAAGTCGGCATTGTCAGCACTGTCGGCATTAACGATGCAACGCCCGCCTGTTTCTATGCTCATAACGCCAAC CGGAAAAATGTATACAACATCGCCTTGCAGATGCCCTCAAGCGGGGTTGACTATTTCGGCGGAGGCTACGCCAACGGAAA CCTTCCGCAAAACCGCAAAAGCGGAACCTCCTTTCGCGGCGATATTGTCGATCTCATGAAATCCCGTAACTATGCTGTTG TAACCGAAAGAGAGCAGCTCGGAAGCGTTCAGCCCGGAACCAGATGCTGGGCCTATACGGCATATGATGAACAAGGAGCC ATGAGCTATGCTCTGGATCGCAAGCAGAAAGAGATCTCCCTTGCCGAATTTACCCGCGAAGGTATTCGTCTGCTCGACAA CCCGAGAGGCTTTTTCATGATGGTTGAAGGGGGAAAAATCGACTGGGCCTGTCATGCCAATGATGCTGCTGCTGTCGCTG GCGACGTGCGTGACTTTGATCGGGCAATAGCCGAAGCCGTTCTGTTTTATCGAAAGCGCCCGCATCAAACCCTCATTATC GTAACCGCCGACCACGAATGCGGAGGGTTGACGCTTGGCAATGCGGCACGCGGTTATGCATCGCGGTTTGAGTTGCTGGG TTACCAGAAAATCTCCGGAGAGCGCTTTGCCGAAAAAGTCGCGACATGGAAAAAAAACCGCAACATATCCTTTCCCATGG CGCTTGACAGTATAAAAGTCTACTATGGGCTTGGCAATGCCGCAGCCGACTCCGCCCTTGCCCTCTCCTCTGCTGATCGC CAGTCGCTCAACGATGCCTACTCGTCGAGCATGGCAAGAGAGGTATCGGACAAAAATCGCTACAGCGCACCGGATGCATT GGCGACAGTCGCGACAGGAATGCTCAACAGGAGGGCCGGAATCGGGTGGACAAGTCCGGTTCATACAGCCCTTCCGGTAC AGGTTATGGCTCTTGGGGTCGGAGCTTCCGTATTTACCGGGTTTTACGACAATACCGATATAGCAGCTAAAATCATCGCC GCTTCACAACTCAAGCCCTTCATCGAAAAGCAGAAGAGAAGTAAAAATATTGCAAACAGGCCCTGA
Upstream 100 bases:
>100_bases GGTGGTTGATGCGAGGAGTTAACGATACTGTAATAGTATGGAACCGAAGGATTCCCTACATTTTCAGAAAATCTGATCAA CGCTCCAACGGCAACCATTC
Downstream 100 bases:
>100_bases TAGTACGCCAAAAAATGTAAAAAAGATGCTGTTGGGGAGCGAGAAAAAAGAATTATACTCTTTTCTTCTTTTAGAAATCG TTAACTTCAGGAAAGATATA
Product: alkaline phosphatase
Products: NA
Alternate protein names: Alkaline phosphatase IV; APase IV [H]
Number of amino acids: Translated: 501; Mature: 501
Protein sequence:
>501_residues MRHFLTNRTKRIALFSSALFVLILLSAPLDAASRRTTKPAGAPRYIFLFIGDGMGLAQAALSDAMRERGTPGLVMNTFPS IGIATTHAENRFITDSGAAGTALATGSKTSIGTISMAANHNDTLRTIAEMVKAKGMKVGIVSTVGINDATPACFYAHNAN RKNVYNIALQMPSSGVDYFGGGYANGNLPQNRKSGTSFRGDIVDLMKSRNYAVVTEREQLGSVQPGTRCWAYTAYDEQGA MSYALDRKQKEISLAEFTREGIRLLDNPRGFFMMVEGGKIDWACHANDAAAVAGDVRDFDRAIAEAVLFYRKRPHQTLII VTADHECGGLTLGNAARGYASRFELLGYQKISGERFAEKVATWKKNRNISFPMALDSIKVYYGLGNAAADSALALSSADR QSLNDAYSSSMAREVSDKNRYSAPDALATVATGMLNRRAGIGWTSPVHTALPVQVMALGVGASVFTGFYDNTDIAAKIIA ASQLKPFIEKQKRSKNIANRP
Sequences:
>Translated_501_residues MRHFLTNRTKRIALFSSALFVLILLSAPLDAASRRTTKPAGAPRYIFLFIGDGMGLAQAALSDAMRERGTPGLVMNTFPS IGIATTHAENRFITDSGAAGTALATGSKTSIGTISMAANHNDTLRTIAEMVKAKGMKVGIVSTVGINDATPACFYAHNAN RKNVYNIALQMPSSGVDYFGGGYANGNLPQNRKSGTSFRGDIVDLMKSRNYAVVTEREQLGSVQPGTRCWAYTAYDEQGA MSYALDRKQKEISLAEFTREGIRLLDNPRGFFMMVEGGKIDWACHANDAAAVAGDVRDFDRAIAEAVLFYRKRPHQTLII VTADHECGGLTLGNAARGYASRFELLGYQKISGERFAEKVATWKKNRNISFPMALDSIKVYYGLGNAAADSALALSSADR QSLNDAYSSSMAREVSDKNRYSAPDALATVATGMLNRRAGIGWTSPVHTALPVQVMALGVGASVFTGFYDNTDIAAKIIA ASQLKPFIEKQKRSKNIANRP >Mature_501_residues MRHFLTNRTKRIALFSSALFVLILLSAPLDAASRRTTKPAGAPRYIFLFIGDGMGLAQAALSDAMRERGTPGLVMNTFPS IGIATTHAENRFITDSGAAGTALATGSKTSIGTISMAANHNDTLRTIAEMVKAKGMKVGIVSTVGINDATPACFYAHNAN RKNVYNIALQMPSSGVDYFGGGYANGNLPQNRKSGTSFRGDIVDLMKSRNYAVVTEREQLGSVQPGTRCWAYTAYDEQGA MSYALDRKQKEISLAEFTREGIRLLDNPRGFFMMVEGGKIDWACHANDAAAVAGDVRDFDRAIAEAVLFYRKRPHQTLII VTADHECGGLTLGNAARGYASRFELLGYQKISGERFAEKVATWKKNRNISFPMALDSIKVYYGLGNAAADSALALSSADR QSLNDAYSSSMAREVSDKNRYSAPDALATVATGMLNRRAGIGWTSPVHTALPVQVMALGVGASVFTGFYDNTDIAAKIIA ASQLKPFIEKQKRSKNIANRP
Specific function: Unknown
COG id: COG1785
COG function: function code P; Alkaline phosphatase
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the alkaline phosphatase family [H]
Homologues:
Organism=Homo sapiens, GI116734717, Length=329, Percent_Identity=28.8753799392097, Blast_Score=114, Evalue=2e-25, Organism=Homo sapiens, GI294660770, Length=327, Percent_Identity=29.0519877675841, Blast_Score=112, Evalue=7e-25, Organism=Homo sapiens, GI94721246, Length=339, Percent_Identity=30.0884955752212, Blast_Score=104, Evalue=2e-22, Organism=Homo sapiens, GI157266296, Length=339, Percent_Identity=29.7935103244838, Blast_Score=102, Evalue=1e-21, Organism=Homo sapiens, GI157266292, Length=339, Percent_Identity=29.4985250737463, Blast_Score=97, Evalue=3e-20, Organism=Homo sapiens, GI294660772, Length=289, Percent_Identity=29.0657439446367, Blast_Score=94, Evalue=3e-19, Organism=Escherichia coli, GI48994877, Length=338, Percent_Identity=29.585798816568, Blast_Score=101, Evalue=9e-23, Organism=Saccharomyces cerevisiae, GI6320689, Length=479, Percent_Identity=25.2609603340292, Blast_Score=100, Evalue=4e-22, Organism=Drosophila melanogaster, GI24651554, Length=352, Percent_Identity=29.2613636363636, Blast_Score=108, Evalue=1e-23, Organism=Drosophila melanogaster, GI21355151, Length=479, Percent_Identity=24.2171189979123, Blast_Score=105, Evalue=9e-23, Organism=Drosophila melanogaster, GI19921912, Length=350, Percent_Identity=28.2857142857143, Blast_Score=97, Evalue=2e-20, Organism=Drosophila melanogaster, GI85725200, Length=354, Percent_Identity=27.4011299435028, Blast_Score=87, Evalue=4e-17, Organism=Drosophila melanogaster, GI85815833, Length=354, Percent_Identity=27.4011299435028, Blast_Score=87, Evalue=4e-17, Organism=Drosophila melanogaster, GI21355981, Length=321, Percent_Identity=25.2336448598131, Blast_Score=86, Evalue=8e-17, Organism=Drosophila melanogaster, GI24657835, Length=333, Percent_Identity=27.6276276276276, Blast_Score=82, Evalue=1e-15, Organism=Drosophila melanogaster, GI18859923, Length=311, Percent_Identity=25.08038585209, Blast_Score=79, Evalue=1e-14, Organism=Drosophila melanogaster, GI24657842, Length=332, Percent_Identity=27.4096385542169, Blast_Score=77, Evalue=2e-14,
Paralogues:
None
Copy number: 340 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017849 - InterPro: IPR001952 - InterPro: IPR018299 - InterPro: IPR017850 [H]
Pfam domain/function: PF00245 Alk_phosphatase [H]
EC number: =3.1.3.1 [H]
Molecular weight: Translated: 54095; Mature: 54095
Theoretical pI: Translated: 10.01; Mature: 10.01
Prosite motif: PS00123 ALKALINE_PHOSPHATASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRHFLTNRTKRIALFSSALFVLILLSAPLDAASRRTTKPAGAPRYIFLFIGDGMGLAQAA CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCEEEEEEEECCCHHHHHH LSDAMRERGTPGLVMNTFPSIGIATTHAENRFITDSGAAGTALATGSKTSIGTISMAANH HHHHHHHCCCCCEEEECCCCCCEEEECCCCEEEECCCCCCCEEECCCCCCCEEEEEECCC NDTLRTIAEMVKAKGMKVGIVSTVGINDATPACFYAHNANRKNVYNIALQMPSSGVDYFG CHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCEEEEECCCCCEEEEEEEECCCCCCCCCC GGYANGNLPQNRKSGTSFRGDIVDLMKSRNYAVVTEREQLGSVQPGTRCWAYTAYDEQGA CCCCCCCCCCCCCCCCCCCHHHHHHHHCCCEEEEEEHHHCCCCCCCCEEEEEEEECCCCC MSYALDRKQKEISLAEFTREGIRLLDNPRGFFMMVEGGKIDWACHANDAAAVAGDVRDFD HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCEEEEEEECCCCHHHHHHHHHHH RAIAEAVLFYRKRPHQTLIIVTADHECGGLTLGNAARGYASRFELLGYQKISGERFAEKV HHHHHHHHHHHCCCCCEEEEEEECCCCCCEEECCCHHHHHHHHHHHCCHHHCHHHHHHHH ATWKKNRNISFPMALDSIKVYYGLGNAAADSALALSSADRQSLNDAYSSSMAREVSDKNR HHHHCCCCCCCCEECCCEEEEEECCCHHCCHHHHHCCHHHHHHHHHHHHHHHHHHHCCCC YSAPDALATVATGMLNRRAGIGWTSPVHTALPVQVMALGVGASVFTGFYDNTDIAAKIIA CCCCHHHHHHHHHHHHCCCCCCCCCCCCHHCCCEEEEECCCHHHHHCCCCCCCHHHHHHH ASQLKPFIEKQKRSKNIANRP HHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MRHFLTNRTKRIALFSSALFVLILLSAPLDAASRRTTKPAGAPRYIFLFIGDGMGLAQAA CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCEEEEEEEECCCHHHHHH LSDAMRERGTPGLVMNTFPSIGIATTHAENRFITDSGAAGTALATGSKTSIGTISMAANH HHHHHHHCCCCCEEEECCCCCCEEEECCCCEEEECCCCCCCEEECCCCCCCEEEEEECCC NDTLRTIAEMVKAKGMKVGIVSTVGINDATPACFYAHNANRKNVYNIALQMPSSGVDYFG CHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCEEEEECCCCCEEEEEEEECCCCCCCCCC GGYANGNLPQNRKSGTSFRGDIVDLMKSRNYAVVTEREQLGSVQPGTRCWAYTAYDEQGA CCCCCCCCCCCCCCCCCCCHHHHHHHHCCCEEEEEEHHHCCCCCCCCEEEEEEEECCCCC MSYALDRKQKEISLAEFTREGIRLLDNPRGFFMMVEGGKIDWACHANDAAAVAGDVRDFD HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCEEEEEEECCCCHHHHHHHHHHH RAIAEAVLFYRKRPHQTLIIVTADHECGGLTLGNAARGYASRFELLGYQKISGERFAEKV HHHHHHHHHHHCCCCCEEEEEEECCCCCCEEECCCHHHHHHHHHHHCCHHHCHHHHHHHH ATWKKNRNISFPMALDSIKVYYGLGNAAADSALALSSADRQSLNDAYSSSMAREVSDKNR HHHHCCCCCCCCEECCCEEEEEECCCHHCCHHHHHCCHHHHHHHHHHHHHHHHHHHCCCC YSAPDALATVATGMLNRRAGIGWTSPVHTALPVQVMALGVGASVFTGFYDNTDIAAKIIA CCCCHHHHHHHHHHHHCCCCCCCCCCCCHHCCCEEEEECCCHHHHHCCCCCCCHHHHHHH ASQLKPFIEKQKRSKNIANRP HHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8113174; 9579061; 9384377; 1898729; 2125017; 2105301; 8144469 [H]