| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119358456
Identifier: 119358456
GI number: 119358456
Start: 3086039
End: 3086362
Strand: Reverse
Name: 119358456
Synonym: Cpha266_2692
Alternate gene names: NA
Gene position: 3086362-3086039 (Counterclockwise)
Preceding gene: 119358457
Following gene: 119358455
Centisome position: 98.48
GC content: 51.85
Gene sequence:
>324_bases GTGACGTCAGATATTTACACCCGTTTTGGAGCTACGGTTCATTTCGAAGAAGGGGGAGCCGCTCTTTTTCTTGTTGTTTC TCACAGCGGAGACCCGTCACGCATGGTCGGCGCCTATGGAGGAGAGGTGGTATTGCGGATGAATCAAAGCAAAGCCCTTG TTGCCCGACTCACCCTTACCGACGCGCTGGCGATGCAGAAAGAACCTTCGATAGCTATGGTTGGAGGCATTCATATGGAT ATCGAACGCTATCAACGTCTCTTGCAAACCCTTGGCGCGACGGATGGCTCCGATATTGACGATATTCTTGCAGGAACAGG GTGA
Upstream 100 bases:
>100_bases AAAAAGATGCTGTTGGGGAGCGAGAAAAAAGAATTATACTCTTTTCTTCTTTTAGAAATCGTTAACTTCAGGAAAGATAT AAAAAGAAAAAAGAGAGTCT
Downstream 100 bases:
>100_bases AAAACCCCTTGACGGTGTTCATCCGGTTATCAATACGCTTTTGTAATTTATTTTTCACGTGCTCATATTCCTGAACCCGT TGTCACATCTCAAGGGCAAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 107; Mature: 106
Protein sequence:
>107_residues MTSDIYTRFGATVHFEEGGAALFLVVSHSGDPSRMVGAYGGEVVLRMNQSKALVARLTLTDALAMQKEPSIAMVGGIHMD IERYQRLLQTLGATDGSDIDDILAGTG
Sequences:
>Translated_107_residues MTSDIYTRFGATVHFEEGGAALFLVVSHSGDPSRMVGAYGGEVVLRMNQSKALVARLTLTDALAMQKEPSIAMVGGIHMD IERYQRLLQTLGATDGSDIDDILAGTG >Mature_106_residues TSDIYTRFGATVHFEEGGAALFLVVSHSGDPSRMVGAYGGEVVLRMNQSKALVARLTLTDALAMQKEPSIAMVGGIHMDI ERYQRLLQTLGATDGSDIDDILAGTG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11387; Mature: 11256
Theoretical pI: Translated: 4.73; Mature: 4.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.6 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSDIYTRFGATVHFEEGGAALFLVVSHSGDPSRMVGAYGGEVVLRMNQSKALVARLTLT CCCCCEECCCCEEEECCCCEEEEEEEECCCCCCCEEECCCCEEEEEECCCCEEEEEHHHH DALAMQKEPSIAMVGGIHMDIERYQRLLQTLGATDGSDIDDILAGTG HHHHHCCCCCEEEECCEEECHHHHHHHHHHHCCCCCCCCHHHHCCCC >Mature Secondary Structure TSDIYTRFGATVHFEEGGAALFLVVSHSGDPSRMVGAYGGEVVLRMNQSKALVARLTLT CCCCEECCCCEEEECCCCEEEEEEEECCCCCCCEEECCCCEEEEEECCCCEEEEEHHHH DALAMQKEPSIAMVGGIHMDIERYQRLLQTLGATDGSDIDDILAGTG HHHHHCCCCCEEEECCEEECHHHHHHHHHHHCCCCCCCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA