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The map label for this gene is pyrF [H]

Identifier: 119358441

GI number: 119358441

Start: 3070473

End: 3071297

Strand: Reverse

Name: pyrF [H]

Synonym: Cpha266_2677

Alternate gene names: 119358441

Gene position: 3071297-3070473 (Counterclockwise)

Preceding gene: 119358449

Following gene: 119358440

Centisome position: 98.0

GC content: 53.58

Gene sequence:

>825_bases
ATGAGTACCGTTCGACAAAAAGCAAACAGCAGAATCTCCCATTTACGCTCGCTCTTGTGCGTCGGGCTTGACAGCGATGA
TCAAAAGATCCCCGAAATTTTTAAAAAAACCGGTTCGCCCGTTCTTGAATTCAACCGGGCGATTATTCGCGCCACCAGCA
ACTCGGCCGTTGCCTACAAGATCAACACGGCATTTTACGAGGCGCGGGGTATTCCGGGCATTCAAGACATGGAGCGAACC
CTCGCCGACATTCCCCGGGCCTGCATAACCATAGCCGATGCGAAGCGGGCGGATATCGGCAATACCAGCAAAAAATATGC
AGAGGCATTTTTTGAACACTGGTCGTTTGACGCGTTGACGGTAGCTCCTTATATGGGCTTCGACTCTCTCGAACCCTTTT
TCGCCTACGAAGATAAGCTGGTTTTTGTGCTCTGTCTCACCTCAAACGAAGGATCGAAAGATTTCGAAGAGCAGTTGCTC
GGCGACGGCAGGCCGCTCTACGAAACGGTACTCGAAAAAGTGAATCAGTGGAACAGAGGCGGCAATGCCGGCATCGTGGT
CGGCGCGACGAAAAACGGTCAGCTCGAAGCCATCAGAGCGGCGGCTCCGGATCTTTTTTTCCTTATTCCCGGCGTCGGCG
CACAGGGAGGCTCTCTTGACGAGGCCGTCCGATACGGCGCCGATTCGGCCAAAGAAAGCGCTCTCGTCAATGTCAGCCGA
AGCCTGATCTTCCCGCAAGGAGCGTTTGCTTCCATCGACGCCTTCGAACAGGCCGTTTCGGTTGAATCCGAAAAACTGCA
TCTGGCCATGAAACGTGCCATGTAA

Upstream 100 bases:

>100_bases
AGCGGGAACCATTCGCTATCGCAGCGTCAATCGATACCGTTTCCGGGCAAGGCAGGAACACCGAATCAGTAAAGCGCCGC
CAAGAAATCAGGAAAAGAGC

Downstream 100 bases:

>100_bases
CGTCGTTACGGCAGCTCCCGTCAGTCAGCAGACAGCATAAATCATCATGCAAAAGCAGGAAATTTATTGCATGAAACAAG
ATCCGAAAAGTCTTATGTGT

Product: orotidine 5'-phosphate decarboxylase

Products: NA

Alternate protein names: OMP decarboxylase; OMPDCase; OMPdecase [H]

Number of amino acids: Translated: 274; Mature: 273

Protein sequence:

>274_residues
MSTVRQKANSRISHLRSLLCVGLDSDDQKIPEIFKKTGSPVLEFNRAIIRATSNSAVAYKINTAFYEARGIPGIQDMERT
LADIPRACITIADAKRADIGNTSKKYAEAFFEHWSFDALTVAPYMGFDSLEPFFAYEDKLVFVLCLTSNEGSKDFEEQLL
GDGRPLYETVLEKVNQWNRGGNAGIVVGATKNGQLEAIRAAAPDLFFLIPGVGAQGGSLDEAVRYGADSAKESALVNVSR
SLIFPQGAFASIDAFEQAVSVESEKLHLAMKRAM

Sequences:

>Translated_274_residues
MSTVRQKANSRISHLRSLLCVGLDSDDQKIPEIFKKTGSPVLEFNRAIIRATSNSAVAYKINTAFYEARGIPGIQDMERT
LADIPRACITIADAKRADIGNTSKKYAEAFFEHWSFDALTVAPYMGFDSLEPFFAYEDKLVFVLCLTSNEGSKDFEEQLL
GDGRPLYETVLEKVNQWNRGGNAGIVVGATKNGQLEAIRAAAPDLFFLIPGVGAQGGSLDEAVRYGADSAKESALVNVSR
SLIFPQGAFASIDAFEQAVSVESEKLHLAMKRAM
>Mature_273_residues
STVRQKANSRISHLRSLLCVGLDSDDQKIPEIFKKTGSPVLEFNRAIIRATSNSAVAYKINTAFYEARGIPGIQDMERTL
ADIPRACITIADAKRADIGNTSKKYAEAFFEHWSFDALTVAPYMGFDSLEPFFAYEDKLVFVLCLTSNEGSKDFEEQLLG
DGRPLYETVLEKVNQWNRGGNAGIVVGATKNGQLEAIRAAAPDLFFLIPGVGAQGGSLDEAVRYGADSAKESALVNVSRS
LIFPQGAFASIDAFEQAVSVESEKLHLAMKRAM

Specific function: Unknown

COG id: COG0284

COG function: function code F; Orotidine-5'-phosphate decarboxylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the OMP decarboxylase family. Type 2 subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR011995
- InterPro:   IPR001754
- InterPro:   IPR011060 [H]

Pfam domain/function: PF00215 OMPdecase [H]

EC number: =4.1.1.23 [H]

Molecular weight: Translated: 29914; Mature: 29783

Theoretical pI: Translated: 5.21; Mature: 5.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTVRQKANSRISHLRSLLCVGLDSDDQKIPEIFKKTGSPVLEFNRAIIRATSNSAVAYK
CCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHCHHHEEECCCCEEEEE
INTAFYEARGIPGIQDMERTLADIPRACITIADAKRADIGNTSKKYAEAFFEHWSFDALT
EEHHEEECCCCCCHHHHHHHHHHCCHHHEECCCCCCCCCCCCHHHHHHHHHHHCCCCEEE
VAPYMGFDSLEPFFAYEDKLVFVLCLTSNEGSKDFEEQLLGDGRPLYETVLEKVNQWNRG
EECCCCCCCCCCHHEECCCEEEEEEEECCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCC
GNAGIVVGATKNGQLEAIRAAAPDLFFLIPGVGAQGGSLDEAVRYGADSAKESALVNVSR
CCCEEEEEECCCCCEEEHHHCCCCEEEEECCCCCCCCCHHHHHHHCCCCHHHHHHHHHHH
SLIFPQGAFASIDAFEQAVSVESEKLHLAMKRAM
HHCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHCC
>Mature Secondary Structure 
STVRQKANSRISHLRSLLCVGLDSDDQKIPEIFKKTGSPVLEFNRAIIRATSNSAVAYK
CHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHCHHHEEECCCCEEEEE
INTAFYEARGIPGIQDMERTLADIPRACITIADAKRADIGNTSKKYAEAFFEHWSFDALT
EEHHEEECCCCCCHHHHHHHHHHCCHHHEECCCCCCCCCCCCHHHHHHHHHHHCCCCEEE
VAPYMGFDSLEPFFAYEDKLVFVLCLTSNEGSKDFEEQLLGDGRPLYETVLEKVNQWNRG
EECCCCCCCCCCHHEECCCEEEEEEEECCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCC
GNAGIVVGATKNGQLEAIRAAAPDLFFLIPGVGAQGGSLDEAVRYGADSAKESALVNVSR
CCCEEEEEECCCCCEEEHHHCCCCEEEEECCCCCCCCCHHHHHHHCCCCHHHHHHHHHHH
SLIFPQGAFASIDAFEQAVSVESEKLHLAMKRAM
HHCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA