| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119358355
Identifier: 119358355
GI number: 119358355
Start: 2961688
End: 2963022
Strand: Reverse
Name: 119358355
Synonym: Cpha266_2587
Alternate gene names: NA
Gene position: 2963022-2961688 (Counterclockwise)
Preceding gene: 119358356
Following gene: 119358351
Centisome position: 94.55
GC content: 54.38
Gene sequence:
>1335_bases ATGATTGGATTTAATGCTGATCTCATAGTGAGTGGTGGTGGGACGGGCGATCCGTGCGGTAGTCCGTGGAAAGGGGCTTT TGATCGTTATTTTCAGGAGCTCCTCAAGCCAAACATTCAGGGGCTGCTTGCCGTGCATCGTTCCGACGATCCGGCGGCTT TTGCATTGCGGTTTCATGGTCGGGGGGATTTGCCGGTACGGGTAATGGCCGAACAGCTTGGCTGCCGGCAGAGGGCTGTG AAAAAATTGCCGATTCTTTCTGCGTTCAATCTGCTGTATACGCCTTTGGCGCTGGAGCAGTCATCCGGGGAGCGCGCGGC GGCTTACAAGGCTTCTTTTATGTCGGGGAATCGGGTAATTGATTTGAGCGGCGGGCTTGGTGTCGATACCGTGTTTCTTG CCGGGAGGTTTCGGGAGGTGGTCTATTGCGAGCGTGATCCGCTGCTTTGCGCCGTGGTTGAGCATAATCTGCAGGCGAGC GGCGTTGCTAATGTTGCCATAAAGAATGATGACAGCATCAGTTTGCTTGCGACTTACCCGGACGATTTTTTTGACTGGAT ATTCGTGGATCCTGCTCGCCGTGAGGAGGGGCGTCGCTCTGTGGCGCTTGAGGCGGCAAGTCCGGATGTGGTTGCTTCTC ATGATCTGTTGCTTCGTCATGCGCAGCGGGTCTGCATCAAGGCGTCTCCGGCTCTGGAGATCAGCGGGCTGAAAAAACTG TTGCCTGCCTTGCGGTCGATTGTTGTTGTTTCAGTCGACCGGGAGTGCAAGGAGATTCTGCTGTTGCTTGAGCGCGGGTT CCCTTCAGATGGGATTGTGCTGGTTAAAGCGGTCTGCCTGAGCGCTGATTCGGAGGAGTTGACGGATGTTGTTGGTGGTG GTGAGGCGCCGAGGGTGGTTGCGAGCGGGGTGAAGGGGTATCTTTATGAGCCTGATCCGGCTATTATCAAGGCGAGGCTT TCGGCGGTGCTTGCGCGCGTTTCCGGGCTTGAGTTTGTGAACGGGAGCGTTGATTATCTTACTGCGGATGTAGTGATTGA CGGGTTTCCGGGCAGGATGTTTCGCGTGGTTGAGTGCATTCCGTACAAGCCGAAAAGTTTCAGGGCTTTTCTGGAGCGTA ACGGTATTACCGGGGCAAGCATTCAGCGGCGAGATTTTCCTCTTTCGGCGGAAGAGCTTCGTAAAAAATACCGACTTGTT GAGAGCGAGCGGGTTTTTATTTTTTTTACCAGAGATGCTGCGGGCCATCCGTTCTGCATCTATGCTCTCAGATGTTTTTC TGGAGACGATGCAGTTCCTTCTGTGCCAGACCGAAACGCAGACCCTGAATGCTGA
Upstream 100 bases:
>100_bases AGATTTCGTATGAGTTTGGGGTGCCCATGCGTATGGTTTTTTTCGGGGGTTTGCGATAACGGGATGTGTGAAGGCCGGAG GGATGTGAATTTCTTGATGT
Downstream 100 bases:
>100_bases CCCGGATTTCTCCGATGCCGAGGAGACGCATGATCTGGAGCAGAATTAATGTGCCCATGGTGATGACGTCGGCTCGTCCT TCGGGTATGCCCATGTTGAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 444; Mature: 444
Protein sequence:
>444_residues MIGFNADLIVSGGGTGDPCGSPWKGAFDRYFQELLKPNIQGLLAVHRSDDPAAFALRFHGRGDLPVRVMAEQLGCRQRAV KKLPILSAFNLLYTPLALEQSSGERAAAYKASFMSGNRVIDLSGGLGVDTVFLAGRFREVVYCERDPLLCAVVEHNLQAS GVANVAIKNDDSISLLATYPDDFFDWIFVDPARREEGRRSVALEAASPDVVASHDLLLRHAQRVCIKASPALEISGLKKL LPALRSIVVVSVDRECKEILLLLERGFPSDGIVLVKAVCLSADSEELTDVVGGGEAPRVVASGVKGYLYEPDPAIIKARL SAVLARVSGLEFVNGSVDYLTADVVIDGFPGRMFRVVECIPYKPKSFRAFLERNGITGASIQRRDFPLSAEELRKKYRLV ESERVFIFFTRDAAGHPFCIYALRCFSGDDAVPSVPDRNADPEC
Sequences:
>Translated_444_residues MIGFNADLIVSGGGTGDPCGSPWKGAFDRYFQELLKPNIQGLLAVHRSDDPAAFALRFHGRGDLPVRVMAEQLGCRQRAV KKLPILSAFNLLYTPLALEQSSGERAAAYKASFMSGNRVIDLSGGLGVDTVFLAGRFREVVYCERDPLLCAVVEHNLQAS GVANVAIKNDDSISLLATYPDDFFDWIFVDPARREEGRRSVALEAASPDVVASHDLLLRHAQRVCIKASPALEISGLKKL LPALRSIVVVSVDRECKEILLLLERGFPSDGIVLVKAVCLSADSEELTDVVGGGEAPRVVASGVKGYLYEPDPAIIKARL SAVLARVSGLEFVNGSVDYLTADVVIDGFPGRMFRVVECIPYKPKSFRAFLERNGITGASIQRRDFPLSAEELRKKYRLV ESERVFIFFTRDAAGHPFCIYALRCFSGDDAVPSVPDRNADPEC >Mature_444_residues MIGFNADLIVSGGGTGDPCGSPWKGAFDRYFQELLKPNIQGLLAVHRSDDPAAFALRFHGRGDLPVRVMAEQLGCRQRAV KKLPILSAFNLLYTPLALEQSSGERAAAYKASFMSGNRVIDLSGGLGVDTVFLAGRFREVVYCERDPLLCAVVEHNLQAS GVANVAIKNDDSISLLATYPDDFFDWIFVDPARREEGRRSVALEAASPDVVASHDLLLRHAQRVCIKASPALEISGLKKL LPALRSIVVVSVDRECKEILLLLERGFPSDGIVLVKAVCLSADSEELTDVVGGGEAPRVVASGVKGYLYEPDPAIIKARL SAVLARVSGLEFVNGSVDYLTADVVIDGFPGRMFRVVECIPYKPKSFRAFLERNGITGASIQRRDFPLSAEELRKKYRLV ESERVFIFFTRDAAGHPFCIYALRCFSGDDAVPSVPDRNADPEC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48453; Mature: 48453
Theoretical pI: Translated: 6.27; Mature: 6.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIGFNADLIVSGGGTGDPCGSPWKGAFDRYFQELLKPNIQGLLAVHRSDDPAAFALRFHG CCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCEEEEEEECC RGDLPVRVMAEQLGCRQRAVKKLPILSAFNLLYTPLALEQSSGERAAAYKASFMSGNRVI CCCCHHHHHHHHHCHHHHHHHHCCHHHHHHHHHCCCEEECCCCCCHHHHHHHHCCCCEEE DLSGGLGVDTVFLAGRFREVVYCERDPLLCAVVEHNLQASGVANVAIKNDDSISLLATYP EECCCCCHHHHHHHHHCEEEEEECCCCCEEEEECCCCCCCCEEEEEEECCCCEEEEEECC DDFFDWIFVDPARREEGRRSVALEAASPDVVASHDLLLRHAQRVCIKASPALEISGLKKL CCCCCEEEECCHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHEEECCCCEEHHHHHHH LPALRSIVVVSVDRECKEILLLLERGFPSDGIVLVKAVCLSADSEELTDVVGGGEAPRVV HHHHHHEEEEECCHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHCCCCCCHHH ASGVKGYLYEPDPAIIKARLSAVLARVSGLEFVNGSVDYLTADVVIDGFPGRMFRVVECI HCCCCCEEECCCHHHHHHHHHHHHHHHCCCCEECCCHHEEEEEEEEECCCCHHHHHHHHC PYKPKSFRAFLERNGITGASIQRRDFPLSAEELRKKYRLVESERVFIFFTRDAAGHPFCI CCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCEEE YALRCFSGDDAVPSVPDRNADPEC EEEEEECCCCCCCCCCCCCCCCCC >Mature Secondary Structure MIGFNADLIVSGGGTGDPCGSPWKGAFDRYFQELLKPNIQGLLAVHRSDDPAAFALRFHG CCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCEEEEEEECC RGDLPVRVMAEQLGCRQRAVKKLPILSAFNLLYTPLALEQSSGERAAAYKASFMSGNRVI CCCCHHHHHHHHHCHHHHHHHHCCHHHHHHHHHCCCEEECCCCCCHHHHHHHHCCCCEEE DLSGGLGVDTVFLAGRFREVVYCERDPLLCAVVEHNLQASGVANVAIKNDDSISLLATYP EECCCCCHHHHHHHHHCEEEEEECCCCCEEEEECCCCCCCCEEEEEEECCCCEEEEEECC DDFFDWIFVDPARREEGRRSVALEAASPDVVASHDLLLRHAQRVCIKASPALEISGLKKL CCCCCEEEECCHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHEEECCCCEEHHHHHHH LPALRSIVVVSVDRECKEILLLLERGFPSDGIVLVKAVCLSADSEELTDVVGGGEAPRVV HHHHHHEEEEECCHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHCCCCCCHHH ASGVKGYLYEPDPAIIKARLSAVLARVSGLEFVNGSVDYLTADVVIDGFPGRMFRVVECI HCCCCCEEECCCHHHHHHHHHHHHHHHCCCCEECCCHHEEEEEEEEECCCCHHHHHHHHC PYKPKSFRAFLERNGITGASIQRRDFPLSAEELRKKYRLVESERVFIFFTRDAAGHPFCI CCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCEEE YALRCFSGDDAVPSVPDRNADPEC EEEEEECCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA