| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119358342
Identifier: 119358342
GI number: 119358342
Start: 2948823
End: 2950301
Strand: Direct
Name: 119358342
Synonym: Cpha266_2574
Alternate gene names: NA
Gene position: 2948823-2950301 (Clockwise)
Preceding gene: 119358341
Following gene: 119358345
Centisome position: 94.09
GC content: 56.19
Gene sequence:
>1479_bases ATGAATCACAGCATTACCACGTCATCCCTGAACCAGCTTCTCGGCATACCGCGCGACACGCCACTGCATCTCGATGAAAT GTGCAAACGGCTTCGCCCCGTTCTCTATCCTGCGCCAGCCATTTCAGATCGGCTCGAACGGTTTTGCCAGGCCCTCTCGG CAAGCATGGCAACACTCGGCATCGAACTCACCACACCTGAAAAAGGATCGCTTCCGAACGGACGGTTCCGGCCAGGAACC GTCATTCTCGCCCCGGGAGAGTTCCCCGACAACCTGCTTGCCATCAACCGCGTATCAACGCTCTACAACAACATCATTGT CGGCATTTACGACGAACCCGCACCCCTGACCCCGGAAGCGACAGCGCAGGAAAGGCTCGACATCATCGTCCGAAGACTCG CCCGCGACATGGTGCACATGCTCATCTTCGTCACCGACCACTCCTGGACGCTCTGCACCATGAACGGCGGCGTCGTCACC CTCAAAGGCCCCTGCCCCGACAAAAACGATGTCCGCTGCACGCTGGTGCCGAAACTCACCGCACAGGTCGTACCCCCAAA ACCTGAAGACCTTGACATCCTCCATCCGGCAAAACAGGACGAACCGATGGCATCGGATGCCATGGCCGAAGATTTTCTCC TGTGCAGCGCGCTCTGGAGCAACAGCAGCTACCTGTTGACCCATACCTCGCGCGAAAACCTCCCATACCGCAACGACTAC TACAAAAAAATAGTAGCGCGTTACCTCGACGAACGCAACGGCATGAGTTACGGATTTTTTGCCCGTCAGCTTCCGGTCAA AACAGAAGCTGCCATAAAGCAGGAGCCGGGCCCGGCAGGAGCGAACAACAACAATGCAAAAAAAACCATGCTCCCGGTTC GAGTTCTCAACCAGACCTATCTGGTGCCGATTCCGGCGGTAACCATTCTTACCACCCGCTCGGGATGCCGTAAAAACAAC CTGAACACCAAAACCGATCTTGTCGAAATCACACTGAACAACGGAAGGATCTCCATGAAAACAGCAGGAATGCTGCCTGA AGGAACAACAGCAAAACCATCGTTCGACACGCTCACCATAGCCGCGCACGCACTTGGCAACGCTCTGGTTGCAAGCATCC TCAAAACAGCAAAACCGGAATCCTCCTTTCCCCGCTATCTCGAACGCCACGGAGCATCCATGACCCACTGGCACGGAGTC GCGCGAAAAGAGCATATACCCGAAGGCTATTTCCTCCACGGAGAGAACAACCCCCCCGTCTCCTGCTCAACCCCGCAGTC AGCAGCATACAGTCTGCTTGGAAAAATCGAAGCGCTTGAACAAGCGCTTGAAGCGGAAATCGACTATCAGGGCGACGTTC ACCTTGAACCGAACCACGGAACCAACATCGTCGGCACGCTCACGCTGGCCGAAACAGCCCGAATTCTCCGCCAATACCAG AACGCCCCGAATCCGCGCACCCCGCCCCTGCAAAAGTGA
Upstream 100 bases:
>100_bases CTGCGAAATACTGCGAACAAAACTGCTCTGGGGTCGCGAACACGACTCAACCCAATAACAACCAACCTCCTCACCCGGAA TTCATATACGCCTCAGCTTC
Downstream 100 bases:
>100_bases AAAACGCCGGACAAACGACCAAAAGGCACCGAAAAACCTAAGCTTCGCGATGATCCATATACGACCACTTGCCCTGCTGC ATCAAAATCATCTCAACGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 492; Mature: 492
Protein sequence:
>492_residues MNHSITTSSLNQLLGIPRDTPLHLDEMCKRLRPVLYPAPAISDRLERFCQALSASMATLGIELTTPEKGSLPNGRFRPGT VILAPGEFPDNLLAINRVSTLYNNIIVGIYDEPAPLTPEATAQERLDIIVRRLARDMVHMLIFVTDHSWTLCTMNGGVVT LKGPCPDKNDVRCTLVPKLTAQVVPPKPEDLDILHPAKQDEPMASDAMAEDFLLCSALWSNSSYLLTHTSRENLPYRNDY YKKIVARYLDERNGMSYGFFARQLPVKTEAAIKQEPGPAGANNNNAKKTMLPVRVLNQTYLVPIPAVTILTTRSGCRKNN LNTKTDLVEITLNNGRISMKTAGMLPEGTTAKPSFDTLTIAAHALGNALVASILKTAKPESSFPRYLERHGASMTHWHGV ARKEHIPEGYFLHGENNPPVSCSTPQSAAYSLLGKIEALEQALEAEIDYQGDVHLEPNHGTNIVGTLTLAETARILRQYQ NAPNPRTPPLQK
Sequences:
>Translated_492_residues MNHSITTSSLNQLLGIPRDTPLHLDEMCKRLRPVLYPAPAISDRLERFCQALSASMATLGIELTTPEKGSLPNGRFRPGT VILAPGEFPDNLLAINRVSTLYNNIIVGIYDEPAPLTPEATAQERLDIIVRRLARDMVHMLIFVTDHSWTLCTMNGGVVT LKGPCPDKNDVRCTLVPKLTAQVVPPKPEDLDILHPAKQDEPMASDAMAEDFLLCSALWSNSSYLLTHTSRENLPYRNDY YKKIVARYLDERNGMSYGFFARQLPVKTEAAIKQEPGPAGANNNNAKKTMLPVRVLNQTYLVPIPAVTILTTRSGCRKNN LNTKTDLVEITLNNGRISMKTAGMLPEGTTAKPSFDTLTIAAHALGNALVASILKTAKPESSFPRYLERHGASMTHWHGV ARKEHIPEGYFLHGENNPPVSCSTPQSAAYSLLGKIEALEQALEAEIDYQGDVHLEPNHGTNIVGTLTLAETARILRQYQ NAPNPRTPPLQK >Mature_492_residues MNHSITTSSLNQLLGIPRDTPLHLDEMCKRLRPVLYPAPAISDRLERFCQALSASMATLGIELTTPEKGSLPNGRFRPGT VILAPGEFPDNLLAINRVSTLYNNIIVGIYDEPAPLTPEATAQERLDIIVRRLARDMVHMLIFVTDHSWTLCTMNGGVVT LKGPCPDKNDVRCTLVPKLTAQVVPPKPEDLDILHPAKQDEPMASDAMAEDFLLCSALWSNSSYLLTHTSRENLPYRNDY YKKIVARYLDERNGMSYGFFARQLPVKTEAAIKQEPGPAGANNNNAKKTMLPVRVLNQTYLVPIPAVTILTTRSGCRKNN LNTKTDLVEITLNNGRISMKTAGMLPEGTTAKPSFDTLTIAAHALGNALVASILKTAKPESSFPRYLERHGASMTHWHGV ARKEHIPEGYFLHGENNPPVSCSTPQSAAYSLLGKIEALEQALEAEIDYQGDVHLEPNHGTNIVGTLTLAETARILRQYQ NAPNPRTPPLQK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54234; Mature: 54234
Theoretical pI: Translated: 7.83; Mature: 7.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNHSITTSSLNQLLGIPRDTPLHLDEMCKRLRPVLYPAPAISDRLERFCQALSASMATLG CCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHEE IELTTPEKGSLPNGRFRPGTVILAPGEFPDNLLAINRVSTLYNNIIVGIYDEPAPLTPEA EEEECCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCEEEEEECCCCCCCCCC TAQERLDIIVRRLARDMVHMLIFVTDHSWTLCTMNGGVVTLKGPCPDKNDVRCTLVPKLT HHHHHHHHHHHHHHHHHHHEEEEEECCCEEEEEECCCEEEEECCCCCCCCEEEEEECCCE AQVVPPKPEDLDILHPAKQDEPMASDAMAEDFLLCSALWSNSSYLLTHTSRENLPYRNDY EEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHH YKKIVARYLDERNGMSYGFFARQLPVKTEAAIKQEPGPAGANNNNAKKTMLPVRVLNQTY HHHHHHHHHHHCCCCEECHHHHCCCCCHHHHHCCCCCCCCCCCCCCHHHEEHHHHHCCEE LVPIPAVTILTTRSGCRKNNLNTKTDLVEITLNNGRISMKTAGMLPEGTTAKPSFDTLTI EEECCEEEEEEECCCCCCCCCCCCCEEEEEEECCCEEEEEECCCCCCCCCCCCCCCHHHH AAHALGNALVASILKTAKPESSFPRYLERHGASMTHWHGVARKEHIPEGYFLHGENNPPV HHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCHHHHCCHHHHCCCCCEEEECCCCCCC SCSTPQSAAYSLLGKIEALEQALEAEIDYQGDVHLEPNHGTNIVGTLTLAETARILRQYQ CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCEEEEEEHHHHHHHHHHHH NAPNPRTPPLQK CCCCCCCCCCCC >Mature Secondary Structure MNHSITTSSLNQLLGIPRDTPLHLDEMCKRLRPVLYPAPAISDRLERFCQALSASMATLG CCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHEE IELTTPEKGSLPNGRFRPGTVILAPGEFPDNLLAINRVSTLYNNIIVGIYDEPAPLTPEA EEEECCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCEEEEEECCCCCCCCCC TAQERLDIIVRRLARDMVHMLIFVTDHSWTLCTMNGGVVTLKGPCPDKNDVRCTLVPKLT HHHHHHHHHHHHHHHHHHHEEEEEECCCEEEEEECCCEEEEECCCCCCCCEEEEEECCCE AQVVPPKPEDLDILHPAKQDEPMASDAMAEDFLLCSALWSNSSYLLTHTSRENLPYRNDY EEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHH YKKIVARYLDERNGMSYGFFARQLPVKTEAAIKQEPGPAGANNNNAKKTMLPVRVLNQTY HHHHHHHHHHHCCCCEECHHHHCCCCCHHHHHCCCCCCCCCCCCCCHHHEEHHHHHCCEE LVPIPAVTILTTRSGCRKNNLNTKTDLVEITLNNGRISMKTAGMLPEGTTAKPSFDTLTI EEECCEEEEEEECCCCCCCCCCCCCEEEEEEECCCEEEEEECCCCCCCCCCCCCCCHHHH AAHALGNALVASILKTAKPESSFPRYLERHGASMTHWHGVARKEHIPEGYFLHGENNPPV HHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCHHHHCCHHHHCCCCCEEEECCCCCCC SCSTPQSAAYSLLGKIEALEQALEAEIDYQGDVHLEPNHGTNIVGTLTLAETARILRQYQ CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCEEEEEEHHHHHHHHHHHH NAPNPRTPPLQK CCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA