| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119358276
Identifier: 119358276
GI number: 119358276
Start: 2875034
End: 2875426
Strand: Reverse
Name: 119358276
Synonym: Cpha266_2508
Alternate gene names: NA
Gene position: 2875426-2875034 (Counterclockwise)
Preceding gene: 119358277
Following gene: 119358275
Centisome position: 91.75
GC content: 43.26
Gene sequence:
>393_bases ATGATCCAGACATTACTGCAGGAAAAATACCCTATCTACACGCTTGAGTTGGAGAAAAACGAGACAAGCTGTAAAACCGT AGATGATATTCTGGCTCATTTCAAACAACGGATTGACGATCATCCGGTGGTTTGTTATATCGGTGTATTTGATCATTATG CCCATACAGCATCCCTGCCTGACGGGGTTATAGCTCCAGGCATAAAAGCAGCAATAAATATTCTTTTCTGTTTTGGCAAG GAAATTCCTAATCCGGGAGTGCTTGCCGTAAGGCCTCGATCAATCGGCGTGGTTGAGCTTGCTGATTCTTTTGTGATAAC TTTTCTTGAGGCTCCTAATCCTGCCGCCAATGAAGCGATGGAGATCTGGACAAAAGTGCTGAAGAATTTATGA
Upstream 100 bases:
>100_bases GAAAATCTTTAAAGCTGTTGTAGAATAGTAGTTACGATAAATGTTCTGAAGCCGTTAACAGCAGTTGTACCATTGAACCT TAAAAAAAGGGGAATCATCT
Downstream 100 bases:
>100_bases TCACGGCTCAGCCGTTGCTCAGTTCAAAGCTCCATAAGTCGTTCTTATGGGGCTTTTTTTTTGTTTGTAAAAAAAATAAA GATAACTTTTCAGTGTAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 130; Mature: 130
Protein sequence:
>130_residues MIQTLLQEKYPIYTLELEKNETSCKTVDDILAHFKQRIDDHPVVCYIGVFDHYAHTASLPDGVIAPGIKAAINILFCFGK EIPNPGVLAVRPRSIGVVELADSFVITFLEAPNPAANEAMEIWTKVLKNL
Sequences:
>Translated_130_residues MIQTLLQEKYPIYTLELEKNETSCKTVDDILAHFKQRIDDHPVVCYIGVFDHYAHTASLPDGVIAPGIKAAINILFCFGK EIPNPGVLAVRPRSIGVVELADSFVITFLEAPNPAANEAMEIWTKVLKNL >Mature_130_residues MIQTLLQEKYPIYTLELEKNETSCKTVDDILAHFKQRIDDHPVVCYIGVFDHYAHTASLPDGVIAPGIKAAINILFCFGK EIPNPGVLAVRPRSIGVVELADSFVITFLEAPNPAANEAMEIWTKVLKNL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14436; Mature: 14436
Theoretical pI: Translated: 5.14; Mature: 5.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIQTLLQEKYPIYTLELEKNETSCKTVDDILAHFKQRIDDHPVVCYIGVFDHYAHTASLP CCHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECHHHHHHCCCCC DGVIAPGIKAAINILFCFGKEIPNPGVLAVRPRSIGVVELADSFVITFLEAPNPAANEAM CCCCCCCHHHHHHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHEEEEEECCCCCCHHHHH EIWTKVLKNL HHHHHHHHCC >Mature Secondary Structure MIQTLLQEKYPIYTLELEKNETSCKTVDDILAHFKQRIDDHPVVCYIGVFDHYAHTASLP CCHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECHHHHHHCCCCC DGVIAPGIKAAINILFCFGKEIPNPGVLAVRPRSIGVVELADSFVITFLEAPNPAANEAM CCCCCCCHHHHHHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHEEEEEECCCCCCHHHHH EIWTKVLKNL HHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA