| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119358275
Identifier: 119358275
GI number: 119358275
Start: 2873948
End: 2874886
Strand: Reverse
Name: 119358275
Synonym: Cpha266_2507
Alternate gene names: NA
Gene position: 2874886-2873948 (Counterclockwise)
Preceding gene: 119358276
Following gene: 119358274
Centisome position: 91.74
GC content: 44.52
Gene sequence:
>939_bases ATGAAACGGTCATGGATGATTTTTTTCAGGAGAGGCGCCTGGTTGTCCGTTCTGGCGGTTATGGTTTTGCTGAGCGCCTG CAGCACTTCACAGCAGTATGTCAAGCTGGCTGAAGCCGGTTCGGCCTATACCGGAGCGATTGCAGCAATGGCGGATAAAG CAAGCGCTATTCAGGTTGAATCATCATCGTACACTCTGCTTGAGAAACGTCAGGATTTGTTATTAAACGTTAAAGGCCCG GTTCTGACGGATTCATTGCAATCGCTTCTCAACCAAAAAAATCATGCGGATGCTGAAGTCATAAAAAGCAATCGAAAAAC AAGAGACGTTGCCATTCACCTGCAGAAATATTTTGCTGCGCTTCAAGCTCTGGCAGCATCAACAGCTCCGGCCGATATTG GAACCAGGACAGACGGGATCATCAAAAAGCTCAATGAAGCTGTTCTTGCAGCAGGAGGAACGCTACCCTCAAACGTATCG CGCCTGCCTTCCGTTGTAACCCTTGCAGGAAAGCATGTCACAGAATCGATCCTGAAAAAGGAGTTTATAGCGAGGAAAGA ATCCATTCGTGCGGCAGTTGCAGTTTTAGGGACAAATAGCGCCAATATCGAAGAGAAATTGAAAAGTAAATCGAAAGATA TGAACACTTCCCGTTTTGACGGGCTTATTGAGTCATCTTTTACGGATAAGAAAAACAGTTTGTTGGGAGCGGTAAGCGAT AAATCGGTATGGATAACACTTCGCCAGAAGCATGTTTACGGATCGGCAGAGGAAAAAGAAAACAGTACGATAATTGATGC GGCCAATAAAAATGCTGAAACGTTCAAAGAGATATTTCTGAAAATGACATCGGAACGTGATCCGGATGTCGCTGACGATG AGTTTAATCGATTAATTGATGAATTCAAGGCGCTGATCGTTTTTATCCAGTCATTTTAA
Upstream 100 bases:
>100_bases TGGGGCTTTTTTTTTGTTTGTAAAAAAAATAAAGATAACTTTTCAGTGTAAAAGTGCGTCAGGTTTTCGTTTGCCGAAAA ACAACTTGCCGGAGGTTTAC
Downstream 100 bases:
>100_bases TGGAGACGTTTGTTATGCCATCGGAAAGAGATAGTGGTGATATTTTACGAATCTTGACTGTCTTCGCTGACAATATTTCA GATTCTGATCTTGAGGAGTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 312; Mature: 312
Protein sequence:
>312_residues MKRSWMIFFRRGAWLSVLAVMVLLSACSTSQQYVKLAEAGSAYTGAIAAMADKASAIQVESSSYTLLEKRQDLLLNVKGP VLTDSLQSLLNQKNHADAEVIKSNRKTRDVAIHLQKYFAALQALAASTAPADIGTRTDGIIKKLNEAVLAAGGTLPSNVS RLPSVVTLAGKHVTESILKKEFIARKESIRAAVAVLGTNSANIEEKLKSKSKDMNTSRFDGLIESSFTDKKNSLLGAVSD KSVWITLRQKHVYGSAEEKENSTIIDAANKNAETFKEIFLKMTSERDPDVADDEFNRLIDEFKALIVFIQSF
Sequences:
>Translated_312_residues MKRSWMIFFRRGAWLSVLAVMVLLSACSTSQQYVKLAEAGSAYTGAIAAMADKASAIQVESSSYTLLEKRQDLLLNVKGP VLTDSLQSLLNQKNHADAEVIKSNRKTRDVAIHLQKYFAALQALAASTAPADIGTRTDGIIKKLNEAVLAAGGTLPSNVS RLPSVVTLAGKHVTESILKKEFIARKESIRAAVAVLGTNSANIEEKLKSKSKDMNTSRFDGLIESSFTDKKNSLLGAVSD KSVWITLRQKHVYGSAEEKENSTIIDAANKNAETFKEIFLKMTSERDPDVADDEFNRLIDEFKALIVFIQSF >Mature_312_residues MKRSWMIFFRRGAWLSVLAVMVLLSACSTSQQYVKLAEAGSAYTGAIAAMADKASAIQVESSSYTLLEKRQDLLLNVKGP VLTDSLQSLLNQKNHADAEVIKSNRKTRDVAIHLQKYFAALQALAASTAPADIGTRTDGIIKKLNEAVLAAGGTLPSNVS RLPSVVTLAGKHVTESILKKEFIARKESIRAAVAVLGTNSANIEEKLKSKSKDMNTSRFDGLIESSFTDKKNSLLGAVSD KSVWITLRQKHVYGSAEEKENSTIIDAANKNAETFKEIFLKMTSERDPDVADDEFNRLIDEFKALIVFIQSF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34162; Mature: 34162
Theoretical pI: Translated: 9.78; Mature: 9.78
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRSWMIFFRRGAWLSVLAVMVLLSACSTSQQYVKLAEAGSAYTGAIAAMADKASAIQVE CCCCEEEEEECCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHCCCCEEEEC SSSYTLLEKRQDLLLNVKGPVLTDSLQSLLNQKNHADAEVIKSNRKTRDVAIHLQKYFAA CCCHHHHHHHHHHEEECCCCHHHHHHHHHHCCCCCCHHHHHHCCCCHHHHHHHHHHHHHH LQALAASTAPADIGTRTDGIIKKLNEAVLAAGGTLPSNVSRLPSVVTLAGKHVTESILKK HHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHHHHHH EFIARKESIRAAVAVLGTNSANIEEKLKSKSKDMNTSRFDGLIESSFTDKKNSLLGAVSD HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHEEEECC KSVWITLRQKHVYGSAEEKENSTIIDAANKNAETFKEIFLKMTSERDPDVADDEFNRLID CEEEEEEEEHHCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHH EFKALIVFIQSF HHHHHHHHHHCC >Mature Secondary Structure MKRSWMIFFRRGAWLSVLAVMVLLSACSTSQQYVKLAEAGSAYTGAIAAMADKASAIQVE CCCCEEEEEECCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHCCCCEEEEC SSSYTLLEKRQDLLLNVKGPVLTDSLQSLLNQKNHADAEVIKSNRKTRDVAIHLQKYFAA CCCHHHHHHHHHHEEECCCCHHHHHHHHHHCCCCCCHHHHHHCCCCHHHHHHHHHHHHHH LQALAASTAPADIGTRTDGIIKKLNEAVLAAGGTLPSNVSRLPSVVTLAGKHVTESILKK HHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHHHHHH EFIARKESIRAAVAVLGTNSANIEEKLKSKSKDMNTSRFDGLIESSFTDKKNSLLGAVSD HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHEEEECC KSVWITLRQKHVYGSAEEKENSTIIDAANKNAETFKEIFLKMTSERDPDVADDEFNRLID CEEEEEEEEHHCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHH EFKALIVFIQSF HHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA