| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119358274
Identifier: 119358274
GI number: 119358274
Start: 2873286
End: 2873933
Strand: Reverse
Name: 119358274
Synonym: Cpha266_2506
Alternate gene names: NA
Gene position: 2873933-2873286 (Counterclockwise)
Preceding gene: 119358275
Following gene: 119358254
Centisome position: 91.7
GC content: 43.83
Gene sequence:
>648_bases ATGCCATCGGAAAGAGATAGTGGTGATATTTTACGAATCTTGACTGTCTTCGCTGACAATATTTCAGATTCTGATCTTGA GGAGTTGTTGGATTCGTCAACAATGAAGCCTGATGAGCAGGTGCGTTTTCGTGAGAAATACAGGACGATGAGAGATGATC TTGAGCGTGTTTGTGCGGCGTACCGTGACTATGAGTTACATGAGCGGGATGTCAATAAAAAGGTGCTGGAAGAGTTTTTG CTGTTGCTCCAGCAAGGGCCCGAACAGCGAGCGAAATTAATTCACCAGCTTGCTCTTGTTCTTGTCAGGGCTGAAAAATT GTTTTTTCTGGATAGTGTCTTAATGAGTGTTTTGAACGAGATATGGCCGAAAGTCAAAAGGCCTAAAACGTTGCCCGCTT TTTCAGGCGGTATTGTGCCATCTGAAGCCGAGTGGCCGAAATACAGGCTTGAGGATATCTATGACGAAAAAAGTCTGAAG GCGCAGAATTTCTGGAATGATGCTTATTTTCTGGTTATGCCGGATATTGAAGCGGCAACCGATGCTCTGAAAAAAAAGAA AAAGGAGCTCGACTCCATTGTCAAGGCTATGGATGGGTGTATGAAAATAATTGGCTTGCTGACAAAGGGTATTGGCCTTT TGGCTTAA
Upstream 100 bases:
>100_bases AACGTGATCCGGATGTCGCTGACGATGAGTTTAATCGATTAATTGATGAATTCAAGGCGCTGATCGTTTTTATCCAGTCA TTTTAATGGAGACGTTTGTT
Downstream 100 bases:
>100_bases TGCGGCTTTTCAAGCCGGAAATTGTCGGAGCATGCGAACATCGTTTTCAAAAAGCAGCCTGATGTCGTCGATTTTGTAGC GCAGGAGCACGGTGCGGTCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 215; Mature: 214
Protein sequence:
>215_residues MPSERDSGDILRILTVFADNISDSDLEELLDSSTMKPDEQVRFREKYRTMRDDLERVCAAYRDYELHERDVNKKVLEEFL LLLQQGPEQRAKLIHQLALVLVRAEKLFFLDSVLMSVLNEIWPKVKRPKTLPAFSGGIVPSEAEWPKYRLEDIYDEKSLK AQNFWNDAYFLVMPDIEAATDALKKKKKELDSIVKAMDGCMKIIGLLTKGIGLLA
Sequences:
>Translated_215_residues MPSERDSGDILRILTVFADNISDSDLEELLDSSTMKPDEQVRFREKYRTMRDDLERVCAAYRDYELHERDVNKKVLEEFL LLLQQGPEQRAKLIHQLALVLVRAEKLFFLDSVLMSVLNEIWPKVKRPKTLPAFSGGIVPSEAEWPKYRLEDIYDEKSLK AQNFWNDAYFLVMPDIEAATDALKKKKKELDSIVKAMDGCMKIIGLLTKGIGLLA >Mature_214_residues PSERDSGDILRILTVFADNISDSDLEELLDSSTMKPDEQVRFREKYRTMRDDLERVCAAYRDYELHERDVNKKVLEEFLL LLQQGPEQRAKLIHQLALVLVRAEKLFFLDSVLMSVLNEIWPKVKRPKTLPAFSGGIVPSEAEWPKYRLEDIYDEKSLKA QNFWNDAYFLVMPDIEAATDALKKKKKELDSIVKAMDGCMKIIGLLTKGIGLLA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24795; Mature: 24664
Theoretical pI: Translated: 5.07; Mature: 5.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSERDSGDILRILTVFADNISDSDLEELLDSSTMKPDEQVRFREKYRTMRDDLERVCAA CCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH YRDYELHERDVNKKVLEEFLLLLQQGPEQRAKLIHQLALVLVRAEKLFFLDSVLMSVLNE HHCCHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IWPKVKRPKTLPAFSGGIVPSEAEWPKYRLEDIYDEKSLKAQNFWNDAYFLVMPDIEAAT HHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHH DALKKKKKELDSIVKAMDGCMKIIGLLTKGIGLLA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure PSERDSGDILRILTVFADNISDSDLEELLDSSTMKPDEQVRFREKYRTMRDDLERVCAA CCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH YRDYELHERDVNKKVLEEFLLLLQQGPEQRAKLIHQLALVLVRAEKLFFLDSVLMSVLNE HHCCHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IWPKVKRPKTLPAFSGGIVPSEAEWPKYRLEDIYDEKSLKAQNFWNDAYFLVMPDIEAAT HHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHH DALKKKKKELDSIVKAMDGCMKIIGLLTKGIGLLA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA