Definition Chlorobium phaeobacteroides DSM 266 chromosome, complete genome.
Accession NC_008639
Length 3,133,902

Click here to switch to the map view.

The map label for this gene is 119358255

Identifier: 119358255

GI number: 119358255

Start: 2855472

End: 2855999

Strand: Direct

Name: 119358255

Synonym: Cpha266_2487

Alternate gene names: NA

Gene position: 2855472-2855999 (Clockwise)

Preceding gene: 119358241

Following gene: 119358256

Centisome position: 91.12

GC content: 43.75

Gene sequence:

>528_bases
ATGCACAAGGAAAACGCATTGATAGAGATAAGAATTGCCGGACTTGGTGAAGGAAAAAACGAGATCGATTTCATCTGTAA
AGCCACTGAGTTCAACGATGAGCAGTTAACGGAGGCGGGATTTACAGGAGATATCAAGGCTTCGTTTTTAGTGATCAAGT
CTGAAAGCGAAATAGCCGTTACGCTGAAAACAGCAACAACAGCCGAATTAACCTGTGATATCTGTCTTGCGCCTGTCATT
CGGGAGCTTACAGGAGTATACACCATCCACTATGTGTATGGCGCCATAGAAGAATACGAAGACCCTGATGATGCCGACTA
TCATGTACTGGACAGAAACGCAATTTCGTTGGATCTTACCGAAGAAGTTCGTGAAACCCTCATGCTCTCGCTTCCAATGA
AGGTAACCTGTACCGATAACCCCGATTGCAGGCTGTTCATCACAGAAAAAGAACACGAAAGGCTCGATGACCATGAAAAA
AGCTCTTGGCATGAGTCTCTTGAAAAGCTTAAAAACAAGTATCGTTAA

Upstream 100 bases:

>100_bases
ATTTTTTTATGCCTTTTTCATCAAAGGAATGCATCCACCTCTTTTCATTTTCCATAATTATTTTTGTACATTGATTTTCC
TTTTACGAAGAGGAGTATAT

Downstream 100 bases:

>100_bases
CCGACAATAAAGATCAGAGAAGAACCATGGCAAATCCAAAAGCCAAAATGTCGAAATCCAGAAGGGATAAACGACGGGCT
CAGTTCAATGCACGCACAAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 175; Mature: 175

Protein sequence:

>175_residues
MHKENALIEIRIAGLGEGKNEIDFICKATEFNDEQLTEAGFTGDIKASFLVIKSESEIAVTLKTATTAELTCDICLAPVI
RELTGVYTIHYVYGAIEEYEDPDDADYHVLDRNAISLDLTEEVRETLMLSLPMKVTCTDNPDCRLFITEKEHERLDDHEK
SSWHESLEKLKNKYR

Sequences:

>Translated_175_residues
MHKENALIEIRIAGLGEGKNEIDFICKATEFNDEQLTEAGFTGDIKASFLVIKSESEIAVTLKTATTAELTCDICLAPVI
RELTGVYTIHYVYGAIEEYEDPDDADYHVLDRNAISLDLTEEVRETLMLSLPMKVTCTDNPDCRLFITEKEHERLDDHEK
SSWHESLEKLKNKYR
>Mature_175_residues
MHKENALIEIRIAGLGEGKNEIDFICKATEFNDEQLTEAGFTGDIKASFLVIKSESEIAVTLKTATTAELTCDICLAPVI
RELTGVYTIHYVYGAIEEYEDPDDADYHVLDRNAISLDLTEEVRETLMLSLPMKVTCTDNPDCRLFITEKEHERLDDHEK
SSWHESLEKLKNKYR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19945; Mature: 19945

Theoretical pI: Translated: 4.35; Mature: 4.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHKENALIEIRIAGLGEGKNEIDFICKATEFNDEQLTEAGFTGDIKASFLVIKSESEIAV
CCCCCCEEEEEEEECCCCCCCEEEEEEECCCCHHHHHHCCCCCCCEEEEEEEECCCCEEE
TLKTATTAELTCDICLAPVIRELTGVYTIHYVYGAIEEYEDPDDADYHVLDRNAISLDLT
EEEECCCCCEEHHHHHHHHHHHHHHHEEEEHHHHHHHHCCCCCCCCEEEEECCEEEEEHH
EEVRETLMLSLPMKVTCTDNPDCRLFITEKEHERLDDHEKSSWHESLEKLKNKYR
HHHHHHHHHCCCEEEEECCCCCEEEEEECCHHHHCCCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MHKENALIEIRIAGLGEGKNEIDFICKATEFNDEQLTEAGFTGDIKASFLVIKSESEIAV
CCCCCCEEEEEEEECCCCCCCEEEEEEECCCCHHHHHHCCCCCCCEEEEEEEECCCCEEE
TLKTATTAELTCDICLAPVIRELTGVYTIHYVYGAIEEYEDPDDADYHVLDRNAISLDLT
EEEECCCCCEEHHHHHHHHHHHHHHHEEEEHHHHHHHHCCCCCCCCEEEEECCEEEEEHH
EEVRETLMLSLPMKVTCTDNPDCRLFITEKEHERLDDHEKSSWHESLEKLKNKYR
HHHHHHHHHCCCEEEEECCCCCEEEEEECCHHHHCCCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA