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The map label for this gene is 119358231

Identifier: 119358231

GI number: 119358231

Start: 2837186

End: 2837608

Strand: Direct

Name: 119358231

Synonym: Cpha266_2463

Alternate gene names: NA

Gene position: 2837186-2837608 (Clockwise)

Preceding gene: 119358230

Following gene: 119358232

Centisome position: 90.53

GC content: 53.9

Gene sequence:

>423_bases
ATGAAACGTTTCCTGCCTCTTCTGACCCTGAGCGTTCTTTTTCTTGGCGCTTGCGGACTTGAAAAACCGCCGGCATCACT
TGAATTTCCGAAATCAAAGGAAGAGGCCGCTGCTCCCGAAGCGCCAGCCGCAGAACCGGCGAAGGATGCTGCTCCGGTCG
ATCCAAAACTTGCCGCAGGCAAAACCGCCTATGACGCAAGCTGTGCCGCGTGCCATGATGCCGGCATGATGGGTGCGCCA
AAACCCGGCGATAAAGCTGCCTGGGCCGAGAGAATTCCTCAGGGAATCGATGTCATGACAAAAAAATCCATTGATGGATT
CACCGGTAAAGCCGGCATGATGCCAGCAAAAGGCGGCAATGCCAGCCTCACTGATGAAGAGGTCGCCAGCGCTGTAACCT
ACATGGTTGAACTTTCAAAATAA

Upstream 100 bases:

>100_bases
AACCATTTTGCCATACCGGGAATAATTTTTAAAATTAAAGCCGTTTTTTTTTATTATTAGCTCAACACTCACACTCACAA
CCTGTATCACGGAGATAACT

Downstream 100 bases:

>100_bases
CCTGTCGGATACTCGGCAGACCGTAATTTGTATTAAAAAAGCAGACGCGATCATCGCCGTCTGCTTTTTTAATTATCCCG
AAAACTCTATCGGGGAAGTG

Product: cytochrome c, class I

Products: NA

Alternate protein names: Cytochrome c555 [H]

Number of amino acids: Translated: 140; Mature: 140

Protein sequence:

>140_residues
MKRFLPLLTLSVLFLGACGLEKPPASLEFPKSKEEAAAPEAPAAEPAKDAAPVDPKLAAGKTAYDASCAACHDAGMMGAP
KPGDKAAWAERIPQGIDVMTKKSIDGFTGKAGMMPAKGGNASLTDEEVASAVTYMVELSK

Sequences:

>Translated_140_residues
MKRFLPLLTLSVLFLGACGLEKPPASLEFPKSKEEAAAPEAPAAEPAKDAAPVDPKLAAGKTAYDASCAACHDAGMMGAP
KPGDKAAWAERIPQGIDVMTKKSIDGFTGKAGMMPAKGGNASLTDEEVASAVTYMVELSK
>Mature_140_residues
MKRFLPLLTLSVLFLGACGLEKPPASLEFPKSKEEAAAPEAPAAEPAKDAAPVDPKLAAGKTAYDASCAACHDAGMMGAP
KPGDKAAWAERIPQGIDVMTKKSIDGFTGKAGMMPAKGGNASLTDEEVASAVTYMVELSK

Specific function: This basic c-type monoheme cytochrome has been found exclusively in the green photosynthetic bacteria, although its role in bacterial photosynthesis is not established. It has an unusually low redox potential compared with mitochondrial cytochrome c. It i

COG id: COG3245

COG function: function code C; Cytochrome c5

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009056
- InterPro:   IPR003088
- InterPro:   IPR002323 [H]

Pfam domain/function: PF00034 Cytochrom_C [H]

EC number: NA

Molecular weight: Translated: 14394; Mature: 14394

Theoretical pI: Translated: 5.24; Mature: 5.24

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
7.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRFLPLLTLSVLFLGACGLEKPPASLEFPKSKEEAAAPEAPAAEPAKDAAPVDPKLAAG
CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCC
KTAYDASCAACHDAGMMGAPKPGDKAAWAERIPQGIDVMTKKSIDGFTGKAGMMPAKGGN
CCCCCCHHHHHHCCCCCCCCCCCCCHHHHHHCCCCCCHHHHCCCCCCCCCCCCCCCCCCC
ASLTDEEVASAVTYMVELSK
CCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKRFLPLLTLSVLFLGACGLEKPPASLEFPKSKEEAAAPEAPAAEPAKDAAPVDPKLAAG
CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCC
KTAYDASCAACHDAGMMGAPKPGDKAAWAERIPQGIDVMTKKSIDGFTGKAGMMPAKGGN
CCCCCCHHHHHHCCCCCCCCCCCCCHHHHHHCCCCCCHHHHCCCCCCCCCCCCCCCCCCC
ASLTDEEVASAVTYMVELSK
CCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12093901 [H]