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The map label for this gene is 119358232

Identifier: 119358232

GI number: 119358232

Start: 2837827

End: 2838165

Strand: Direct

Name: 119358232

Synonym: Cpha266_2464

Alternate gene names: NA

Gene position: 2837827-2838165 (Clockwise)

Preceding gene: 119358231

Following gene: 119358233

Centisome position: 90.55

GC content: 51.62

Gene sequence:

>339_bases
ATGTCTCGTTTTCTTTCTGCCGCACTGTGCGCACTGTTTGTTATGTCATTCAGCCTGTCAGACGCTAACGCTGTCACTTA
TAACGCTGCAGCAGGTAAAGCCGTTTACGATGCAAGCTGCGCATCCTGCCACAAAGACGGCATCATGGGCGCCCCTAAAA
CCGGAAACAAGCCAGCCTGGGTATCCCGTATTGCTCAGGGAATGGATCTGATGGTCAGCCACTCCGTCAAAGGCTACCAG
GGTAAAAAAGGATTTATGCCCGCTAAAGGCGGCAACACAAAACTCACCGACGCCCAGGTTGGTAATGCCGTTGCCTATAT
GGTTGGACTGAGCAAGTAA

Upstream 100 bases:

>100_bases
TTGGAAGGTTTCACGATAAATGGTAAAATAAGGACTTTTTATGTTTCACGCGATCAACAGGTTTCAATAAAACTAAAAAT
ATTTAACGGAGGATCACCCT

Downstream 100 bases:

>100_bases
GATCAACGACGATGCGATAAACTTCAGAAGGCGGGATACACTCCCGCCTTTTTGTGTTCCTGAAACTTTATACAGTCGAA
ACAGACATGCATAATCCCGA

Product: cytochrome c, class I

Products: NA

Alternate protein names: Cytochrome c555 [H]

Number of amino acids: Translated: 112; Mature: 111

Protein sequence:

>112_residues
MSRFLSAALCALFVMSFSLSDANAVTYNAAAGKAVYDASCASCHKDGIMGAPKTGNKPAWVSRIAQGMDLMVSHSVKGYQ
GKKGFMPAKGGNTKLTDAQVGNAVAYMVGLSK

Sequences:

>Translated_112_residues
MSRFLSAALCALFVMSFSLSDANAVTYNAAAGKAVYDASCASCHKDGIMGAPKTGNKPAWVSRIAQGMDLMVSHSVKGYQ
GKKGFMPAKGGNTKLTDAQVGNAVAYMVGLSK
>Mature_111_residues
SRFLSAALCALFVMSFSLSDANAVTYNAAAGKAVYDASCASCHKDGIMGAPKTGNKPAWVSRIAQGMDLMVSHSVKGYQG
KKGFMPAKGGNTKLTDAQVGNAVAYMVGLSK

Specific function: This basic c-type monoheme cytochrome has been found exclusively in the green photosynthetic bacteria, although its role in bacterial photosynthesis is not established. It has an unusually low redox potential compared with mitochondrial cytochrome c. It i

COG id: COG3245

COG function: function code C; Cytochrome c5

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009056
- InterPro:   IPR003088
- InterPro:   IPR002323 [H]

Pfam domain/function: PF00034 Cytochrom_C [H]

EC number: NA

Molecular weight: Translated: 11601; Mature: 11469

Theoretical pI: Translated: 10.00; Mature: 10.00

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
6.2 %Met     (Translated Protein)
8.9 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
5.4 %Met     (Mature Protein)
8.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRFLSAALCALFVMSFSLSDANAVTYNAAAGKAVYDASCASCHKDGIMGAPKTGNKPAW
CCHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHCCHHHHHHCCCCCCCCCCCCCCHH
VSRIAQGMDLMVSHSVKGYQGKKGFMPAKGGNTKLTDAQVGNAVAYMVGLSK
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHCCEEEEEEECCC
>Mature Secondary Structure 
SRFLSAALCALFVMSFSLSDANAVTYNAAAGKAVYDASCASCHKDGIMGAPKTGNKPAW
CHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHCCHHHHHHCCCCCCCCCCCCCCHH
VSRIAQGMDLMVSHSVKGYQGKKGFMPAKGGNTKLTDAQVGNAVAYMVGLSK
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHCCEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12093901 [H]