| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is purA
Identifier: 119358158
GI number: 119358158
Start: 2777878
End: 2779182
Strand: Reverse
Name: purA
Synonym: Cpha266_2390
Alternate gene names: 119358158
Gene position: 2779182-2777878 (Counterclockwise)
Preceding gene: 119358159
Following gene: 119358157
Centisome position: 88.68
GC content: 49.43
Gene sequence:
>1305_bases GTGGAATCACCATCATTCAGTAAACCAGTCCAGTCAGCAACCGTGATTGTCGGAACACAGTTCGGTGATGAAGGGAAAGG GAAACTCGTTGACTATCTGTCGGATAAATACGATATCGTCGTCCGCTATCAGGGCGGAGCCAATGCAGGCCATACCATCT GTTTCGACAATAAAACAATTGTTCTCCATCTGCTTCCTTCCGGTATTTTTCATGAAGGGTGCGTCTGTGTGATCGGTAAC GGTGTTGTCATTGATCCTGCTGCGTTGCTTGATGAAATCCGCAAAGTTGAGGAACTGGGCTATGAGGTAAAAGGTCGTCT CTTTATCAGTCATAACGCGCACCTCATCATGCCCTACCACAAGCGGCTTGATTCGTTGCACGAAGATGCCCAGGGCGACC AGAAAATAGGAACGACGGGAAGGGGAATCGGCCCGAGTTATGAGGACAAATTTGCACGAAAAGGGATCAGGGTTGTCGAT CTTCTCAATCCCGAAGTGCTTCAGGAAAAACTCAGAGATAACCTTGCAGCTAAAAACAAGCTTCTGAAAACGATCTACGA AAAGGAAGAGTTCGATATCGACGCAATGGTCAAGGAGTATGCCGAATTCGACAAGATTATTGATCCTTATGTCACCAATA CGCAGCTCTACCTCAATCGACAGCTCAAGGCGGGTAAAACCGTATTGCTCGAAGGAGCCCAGGGTTGTCTGCTCGATGTC GATCACGGAACCTATCCCTATGTTACCTCGTCCAATCCCACCTCAGGAGGTGCCTGCACCGGATCGGGAATTGCGCCGAA CTATATCGGCAAAGTCATAGGTATCTGCAAGGCATACATGACCAGAGTTGGTAACGGGGCATTTCCTTCAGAGCTGTCAG ATGAAACAGGTGAGCGCCTTGGCCAGATCGGTCATGAATTCGGAGCGACAACCGGAAGAAAGCGACGGTGCGGATGGATT GATCTTGTCGCGCTGCGCTACTCTCTTGCCGTTAACGGCGTCACGGAAATTGCCCTGACCAAACTTGATGTGCTCGATAC CTTTGAAGAGATCAGCGTCTGTACCTCCTATATGCTGGATGGAAAAGAGATTCAGGATTTTCCTACCGATCATCAGACGC TGTCGAGAGTGACGCCGGTGTTCAAAACAATGAAAGGCTGGAAGGCTACCAACGCCGACGCACGAACCTTTGACGAAATG CGTCCCGAAGCAAGGAACTATGTAACCTTTCTTGAAGAGGAGCTGCAGGTTCCGGTTACCTTTATTTCTGTAGGCCCCGG CCGTGACGAAACGGTATTCAGATAA
Upstream 100 bases:
>100_bases TTGAATGCCGAATTTATTGTAAATTATTCATCTTTTTCATCAAAAGCCAGACTTGAACTTCTGGCGCATCTTGCTCAATA CATCCGTTAAAACAATCGTC
Downstream 100 bases:
>100_bases CCTTCAGGTTTATTTGCTATGGCATTGATGGATATCACCGTTATTCCCCTTGACAACAGAGATGGCGGCTTGAGTGATTT CGTGGCAGGATTGCAGGAGC
Product: adenylosuccinate synthetase
Products: NA
Alternate protein names: AMPSase; AdSS; IMP--aspartate ligase
Number of amino acids: Translated: 434; Mature: 434
Protein sequence:
>434_residues MESPSFSKPVQSATVIVGTQFGDEGKGKLVDYLSDKYDIVVRYQGGANAGHTICFDNKTIVLHLLPSGIFHEGCVCVIGN GVVIDPAALLDEIRKVEELGYEVKGRLFISHNAHLIMPYHKRLDSLHEDAQGDQKIGTTGRGIGPSYEDKFARKGIRVVD LLNPEVLQEKLRDNLAAKNKLLKTIYEKEEFDIDAMVKEYAEFDKIIDPYVTNTQLYLNRQLKAGKTVLLEGAQGCLLDV DHGTYPYVTSSNPTSGGACTGSGIAPNYIGKVIGICKAYMTRVGNGAFPSELSDETGERLGQIGHEFGATTGRKRRCGWI DLVALRYSLAVNGVTEIALTKLDVLDTFEEISVCTSYMLDGKEIQDFPTDHQTLSRVTPVFKTMKGWKATNADARTFDEM RPEARNYVTFLEEELQVPVTFISVGPGRDETVFR
Sequences:
>Translated_434_residues MESPSFSKPVQSATVIVGTQFGDEGKGKLVDYLSDKYDIVVRYQGGANAGHTICFDNKTIVLHLLPSGIFHEGCVCVIGN GVVIDPAALLDEIRKVEELGYEVKGRLFISHNAHLIMPYHKRLDSLHEDAQGDQKIGTTGRGIGPSYEDKFARKGIRVVD LLNPEVLQEKLRDNLAAKNKLLKTIYEKEEFDIDAMVKEYAEFDKIIDPYVTNTQLYLNRQLKAGKTVLLEGAQGCLLDV DHGTYPYVTSSNPTSGGACTGSGIAPNYIGKVIGICKAYMTRVGNGAFPSELSDETGERLGQIGHEFGATTGRKRRCGWI DLVALRYSLAVNGVTEIALTKLDVLDTFEEISVCTSYMLDGKEIQDFPTDHQTLSRVTPVFKTMKGWKATNADARTFDEM RPEARNYVTFLEEELQVPVTFISVGPGRDETVFR >Mature_434_residues MESPSFSKPVQSATVIVGTQFGDEGKGKLVDYLSDKYDIVVRYQGGANAGHTICFDNKTIVLHLLPSGIFHEGCVCVIGN GVVIDPAALLDEIRKVEELGYEVKGRLFISHNAHLIMPYHKRLDSLHEDAQGDQKIGTTGRGIGPSYEDKFARKGIRVVD LLNPEVLQEKLRDNLAAKNKLLKTIYEKEEFDIDAMVKEYAEFDKIIDPYVTNTQLYLNRQLKAGKTVLLEGAQGCLLDV DHGTYPYVTSSNPTSGGACTGSGIAPNYIGKVIGICKAYMTRVGNGAFPSELSDETGERLGQIGHEFGATTGRKRRCGWI DLVALRYSLAVNGVTEIALTKLDVLDTFEEISVCTSYMLDGKEIQDFPTDHQTLSRVTPVFKTMKGWKATNADARTFDEM RPEARNYVTFLEEELQVPVTFISVGPGRDETVFR
Specific function: Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first commited step in the biosynthesis of AMP from IMP
COG id: COG0104
COG function: function code F; Adenylosuccinate synthase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the adenylosuccinate synthetase family
Homologues:
Organism=Homo sapiens, GI22748717, Length=424, Percent_Identity=46.2264150943396, Blast_Score=367, Evalue=1e-102, Organism=Homo sapiens, GI34577063, Length=430, Percent_Identity=45.3488372093023, Blast_Score=364, Evalue=1e-101, Organism=Homo sapiens, GI40316944, Length=394, Percent_Identity=45.1776649746193, Blast_Score=330, Evalue=1e-90, Organism=Escherichia coli, GI1790620, Length=420, Percent_Identity=47.6190476190476, Blast_Score=400, Evalue=1e-113, Organism=Caenorhabditis elegans, GI25146553, Length=439, Percent_Identity=44.1913439635535, Blast_Score=360, Evalue=1e-100, Organism=Caenorhabditis elegans, GI25146555, Length=433, Percent_Identity=44.5727482678984, Blast_Score=358, Evalue=2e-99, Organism=Saccharomyces cerevisiae, GI6324109, Length=433, Percent_Identity=42.9561200923788, Blast_Score=359, Evalue=1e-100, Organism=Drosophila melanogaster, GI21356033, Length=421, Percent_Identity=44.8931116389549, Blast_Score=368, Evalue=1e-102,
Paralogues:
None
Copy number: 940 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): PURA_CHLPD (A1BJ01)
Other databases:
- EMBL: CP000492 - RefSeq: YP_912802.1 - ProteinModelPortal: A1BJ01 - SMR: A1BJ01 - STRING: A1BJ01 - GeneID: 4568612 - GenomeReviews: CP000492_GR - KEGG: cph:Cpha266_2390 - NMPDR: fig|290317.7.peg.2505 - eggNOG: COG0104 - HOGENOM: HBG658237 - OMA: DYVVRYQ - ProtClustDB: PRK01117 - GO: GO:0005737 - HAMAP: MF_00011 - InterPro: IPR018220 - InterPro: IPR001114 - PANTHER: PTHR11846 - SMART: SM00788 - TIGRFAMs: TIGR00184
Pfam domain/function: PF00709 Adenylsucc_synt
EC number: =6.3.4.4
Molecular weight: Translated: 47964; Mature: 47964
Theoretical pI: Translated: 5.50; Mature: 5.50
Prosite motif: PS01266 ADENYLOSUCCIN_SYN_1; PS00513 ADENYLOSUCCIN_SYN_2
Important sites: ACT_SITE 23-23 ACT_SITE 51-51 BINDING 139-139 BINDING 153-153 BINDING 234-234 BINDING 249-249 BINDING 313-313 BINDING 315-315
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MESPSFSKPVQSATVIVGTQFGDEGKGKLVDYLSDKYDIVVRYQGGANAGHTICFDNKTI CCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHCCCCEEEEEEECCCCCCCCEEEECCCEE VLHLLPSGIFHEGCVCVIGNGVVIDPAALLDEIRKVEELGYEVKGRLFISHNAHLIMPYH EEEECCCCCCCCCCEEEECCCEEECHHHHHHHHHHHHHCCCEEEEEEEEECCCEEEEHHH KRLDSLHEDAQGDQKIGTTGRGIGPSYEDKFARKGIRVVDLLNPEVLQEKLRDNLAAKNK HHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHH LLKTIYEKEEFDIDAMVKEYAEFDKIIDPYVTNTQLYLNRQLKAGKTVLLEGAQGCLLDV HHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCEEEEECCCCCEEEC DHGTYPYVTSSNPTSGGACTGSGIAPNYIGKVIGICKAYMTRVGNGAFPSELSDETGERL CCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH GQIGHEFGATTGRKRRCGWIDLVALRYSLAVNGVTEIALTKLDVLDTFEEISVCTSYMLD HHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCC GKEIQDFPTDHQTLSRVTPVFKTMKGWKATNADARTFDEMRPEARNYVTFLEEELQVPVT CCHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCHHHHHHHHHHHHHHCCCEE FISVGPGRDETVFR EEEECCCCCCCCCC >Mature Secondary Structure MESPSFSKPVQSATVIVGTQFGDEGKGKLVDYLSDKYDIVVRYQGGANAGHTICFDNKTI CCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHCCCCEEEEEEECCCCCCCCEEEECCCEE VLHLLPSGIFHEGCVCVIGNGVVIDPAALLDEIRKVEELGYEVKGRLFISHNAHLIMPYH EEEECCCCCCCCCCEEEECCCEEECHHHHHHHHHHHHHCCCEEEEEEEEECCCEEEEHHH KRLDSLHEDAQGDQKIGTTGRGIGPSYEDKFARKGIRVVDLLNPEVLQEKLRDNLAAKNK HHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHH LLKTIYEKEEFDIDAMVKEYAEFDKIIDPYVTNTQLYLNRQLKAGKTVLLEGAQGCLLDV HHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCEEEEECCCCCEEEC DHGTYPYVTSSNPTSGGACTGSGIAPNYIGKVIGICKAYMTRVGNGAFPSELSDETGERL CCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH GQIGHEFGATTGRKRRCGWIDLVALRYSLAVNGVTEIALTKLDVLDTFEEISVCTSYMLD HHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCC GKEIQDFPTDHQTLSRVTPVFKTMKGWKATNADARTFDEMRPEARNYVTFLEEELQVPVT CCHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCHHHHHHHHHHHHHHCCCEE FISVGPGRDETVFR EEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA