| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is engB
Identifier: 119358159
GI number: 119358159
Start: 2779193
End: 2779771
Strand: Reverse
Name: engB
Synonym: Cpha266_2391
Alternate gene names: 119358159
Gene position: 2779771-2779193 (Counterclockwise)
Preceding gene: 119358161
Following gene: 119358158
Centisome position: 88.7
GC content: 45.6
Gene sequence:
>579_bases ATGAAAATTACTGATGCGGCTTTTTATATAAGTGCTGCGGCGCTTTCAGGGCTTCCTGATCTTCAGATTCCGGAAATTGT TTTTGCCGGCAGGTCGAATGTCGGTAAATCAACACTCCTGAACTCGCTTGCCGGGATCAAAGGGCTTGCAAAAACCAGTT CAACACCGGGCAAGACCAGGCTGATCAACTTTTTTCTTGTCAATAAGGCATTCTTTTTTGTGGATCTCCCCGGTTACGGT TTTGCCGCTGTCGGACATGAACAGCACGAAGCATGGAAAAAGCTTTTGACAACCTATATCGAGAGGCGCTCTGCTATAAC GCTTGTCGTCCTGCTTGTGGATTCCCGCCACCCTGCCATGCAGTCAGATCGTGAGATGATCGATTATCTCACCTATCTTG GAAAACCCTATGGAATTGTACTCACCAAGGATGACAAGCTTACCCAGAGTCAGCGCATCAAAGCCCGACGTGTTATGGAA AGTTCTGCTTTGAATGCCGAATTTATTGTAAATTATTCATCTTTTTCATCAAAAGCCAGACTTGAACTTCTGGCGCATCT TGCTCAATACATCCGTTAA
Upstream 100 bases:
>100_bases GTTTTTAACACAAGGTTTTTAGTTTGCTTTTTTCCATGCAATGGCGGTACTGTTTTGCAGTGCCGCCTGTTTGTTTTTTT TCACGAAGGGTTCCACAGCC
Downstream 100 bases:
>100_bases AACAATCGTCGTGGAATCACCATCATTCAGTAAACCAGTCCAGTCAGCAACCGTGATTGTCGGAACACAGTTCGGTGATG AAGGGAAAGGGAAACTCGTT
Product: ribosome biogenesis GTP-binding protein YsxC
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 192; Mature: 192
Protein sequence:
>192_residues MKITDAAFYISAAALSGLPDLQIPEIVFAGRSNVGKSTLLNSLAGIKGLAKTSSTPGKTRLINFFLVNKAFFFVDLPGYG FAAVGHEQHEAWKKLLTTYIERRSAITLVVLLVDSRHPAMQSDREMIDYLTYLGKPYGIVLTKDDKLTQSQRIKARRVME SSALNAEFIVNYSSFSSKARLELLAHLAQYIR
Sequences:
>Translated_192_residues MKITDAAFYISAAALSGLPDLQIPEIVFAGRSNVGKSTLLNSLAGIKGLAKTSSTPGKTRLINFFLVNKAFFFVDLPGYG FAAVGHEQHEAWKKLLTTYIERRSAITLVVLLVDSRHPAMQSDREMIDYLTYLGKPYGIVLTKDDKLTQSQRIKARRVME SSALNAEFIVNYSSFSSKARLELLAHLAQYIR >Mature_192_residues MKITDAAFYISAAALSGLPDLQIPEIVFAGRSNVGKSTLLNSLAGIKGLAKTSSTPGKTRLINFFLVNKAFFFVDLPGYG FAAVGHEQHEAWKKLLTTYIERRSAITLVVLLVDSRHPAMQSDREMIDYLTYLGKPYGIVLTKDDKLTQSQRIKARRVME SSALNAEFIVNYSSFSSKARLELLAHLAQYIR
Specific function: Necessary for normal cell division and for the maintenance of normal septation
COG id: COG0218
COG function: function code R; Predicted GTPase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 G (guanine nucleotide-binding) domain
Homologues:
Organism=Homo sapiens, GI56549685, Length=149, Percent_Identity=38.9261744966443, Blast_Score=96, Evalue=2e-20, Organism=Escherichia coli, GI145693205, Length=170, Percent_Identity=40, Blast_Score=125, Evalue=2e-30, Organism=Saccharomyces cerevisiae, GI6320543, Length=149, Percent_Identity=30.8724832214765, Blast_Score=74, Evalue=2e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): ENGB_CHLPD (A1BJ02)
Other databases:
- EMBL: CP000492 - RefSeq: YP_912803.1 - ProteinModelPortal: A1BJ02 - SMR: A1BJ02 - STRING: A1BJ02 - GeneID: 4568613 - GenomeReviews: CP000492_GR - KEGG: cph:Cpha266_2391 - NMPDR: fig|290317.7.peg.2506 - eggNOG: COG0218 - HOGENOM: HBG447097 - OMA: FIVNYSS - ProtClustDB: PRK00454 - GO: GO:0005622 - HAMAP: MF_00321 - InterPro: IPR019987 - InterPro: IPR002917 - TIGRFAMs: TIGR03598
Pfam domain/function: PF01926 MMR_HSR1
EC number: NA
Molecular weight: Translated: 21348; Mature: 21348
Theoretical pI: Translated: 10.19; Mature: 10.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKITDAAFYISAAALSGLPDLQIPEIVFAGRSNVGKSTLLNSLAGIKGLAKTSSTPGKTR CCCCHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHH LINFFLVNKAFFFVDLPGYGFAAVGHEQHEAWKKLLTTYIERRSAITLVVLLVDSRHPAM HHHHEEECCEEEEEECCCCCEEECCCHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCH QSDREMIDYLTYLGKPYGIVLTKDDKLTQSQRIKARRVMESSALNAEFIVNYSSFSSKAR HHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHH LELLAHLAQYIR HHHHHHHHHHHC >Mature Secondary Structure MKITDAAFYISAAALSGLPDLQIPEIVFAGRSNVGKSTLLNSLAGIKGLAKTSSTPGKTR CCCCHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHH LINFFLVNKAFFFVDLPGYGFAAVGHEQHEAWKKLLTTYIERRSAITLVVLLVDSRHPAM HHHHEEECCEEEEEECCCCCEEECCCHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCH QSDREMIDYLTYLGKPYGIVLTKDDKLTQSQRIKARRVMESSALNAEFIVNYSSFSSKAR HHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHH LELLAHLAQYIR HHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA