| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119358146
Identifier: 119358146
GI number: 119358146
Start: 2764341
End: 2765369
Strand: Direct
Name: 119358146
Synonym: Cpha266_2378
Alternate gene names: NA
Gene position: 2764341-2765369 (Clockwise)
Preceding gene: 119358136
Following gene: 119358147
Centisome position: 88.21
GC content: 53.35
Gene sequence:
>1029_bases ATGGATCGCCCGCCTTCTGGCGGACCTGTTGACGCCGCACCGCTGCAGGTTATTTTTTCCGATCCCCTGACAGGAGCGAC AAAAACAAGTCCGAAAATCATACGACTCTCTTTCACTCATGCCATTGCCCTGAAAGAGTTGCAGAAATCGATTTTTTTCA CTCCCCGTATCAGCAACTACGATATTTTTGTTCACGGACGGGAAGCGGAGATAAGAATTTATGAACCGCTTCAGGATGAC CGCACCTACTCGGTCATGATCCGACGACAGCTCAGCGACTATCGCGGCGCGACACTTTCGACACCCTGGACGCTCTCGTT TGCCACCGGGCCGGTTATCGACAACGGATCGCTCTCCGGCAGGGTGTTCAACGCCGATCTATCGCCTGCCGAAAATGCAC TGATCATGCTTTACAGAAAAGCGGCTTCAGGTACGGATCCTGATTACGTCGTACAGACAGATCAGACCGGAGCATTCAGG CTTGACCATATCCGTACAGGGCTCTATCGCCTCATTGCCGTGCATGACCGCAATCTCAACCTGCACTTCGACCCGGCGAC AGAAGAAACTGCCATTCCGGGCAGCGAGTTCGTTGCAGCGGGAACCTCATCGCTCCTCATGCGCTTTGCTCCGCAAAAAG ACGCGAAACCGGCACTCTTCGCTGATACCGAAAAAAACAGGACGGAAGAAACCGGTACCATCAAAGGAAGCTGCCTTGCC GATGCCAGATGGCTCATCATCGAGGCTAAAGCGCTCAACAGCTCAAAAGTATGGAGAATAACCGCTGCTCCGACTCAAAA AGGTCTGTTCCGTTTTACCTTTGCCAGTCTGCCTGAAGGCGACTATACCATCAGCGCCTTTATCCCCTCGGGAAACAGAA AACCGGACGCTCATATAACATGGAGTCCCGGCAAGCTTGATCCGTTCACCCCCTCAGACCCTTTCGGTCTGTATCCAAAG GCTGTTCACGTCCGACCAGGATGGGACGCCGAAACCATCGATTTCACCATCAGCGCTCCTGATCGCTGA
Upstream 100 bases:
>100_bases CCCCCTATTGACAAGCTGAAGGAGCTAAGTCCTGAAACGTTTTCCTTACACCAATTTTCTCTTTGCGCTCCTGCTTCTCG TTACTGCGGGAGGGTGCGCT
Downstream 100 bases:
>100_bases AAAATAAAAACCACTTATGCAGTCGTCAATGAACACTCCTTCGAAAATCGGTCCCAACTCCATTATTCAAACTGTAACCG CCCTTGAAAAAAACTTCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 342; Mature: 342
Protein sequence:
>342_residues MDRPPSGGPVDAAPLQVIFSDPLTGATKTSPKIIRLSFTHAIALKELQKSIFFTPRISNYDIFVHGREAEIRIYEPLQDD RTYSVMIRRQLSDYRGATLSTPWTLSFATGPVIDNGSLSGRVFNADLSPAENALIMLYRKAASGTDPDYVVQTDQTGAFR LDHIRTGLYRLIAVHDRNLNLHFDPATEETAIPGSEFVAAGTSSLLMRFAPQKDAKPALFADTEKNRTEETGTIKGSCLA DARWLIIEAKALNSSKVWRITAAPTQKGLFRFTFASLPEGDYTISAFIPSGNRKPDAHITWSPGKLDPFTPSDPFGLYPK AVHVRPGWDAETIDFTISAPDR
Sequences:
>Translated_342_residues MDRPPSGGPVDAAPLQVIFSDPLTGATKTSPKIIRLSFTHAIALKELQKSIFFTPRISNYDIFVHGREAEIRIYEPLQDD RTYSVMIRRQLSDYRGATLSTPWTLSFATGPVIDNGSLSGRVFNADLSPAENALIMLYRKAASGTDPDYVVQTDQTGAFR LDHIRTGLYRLIAVHDRNLNLHFDPATEETAIPGSEFVAAGTSSLLMRFAPQKDAKPALFADTEKNRTEETGTIKGSCLA DARWLIIEAKALNSSKVWRITAAPTQKGLFRFTFASLPEGDYTISAFIPSGNRKPDAHITWSPGKLDPFTPSDPFGLYPK AVHVRPGWDAETIDFTISAPDR >Mature_342_residues MDRPPSGGPVDAAPLQVIFSDPLTGATKTSPKIIRLSFTHAIALKELQKSIFFTPRISNYDIFVHGREAEIRIYEPLQDD RTYSVMIRRQLSDYRGATLSTPWTLSFATGPVIDNGSLSGRVFNADLSPAENALIMLYRKAASGTDPDYVVQTDQTGAFR LDHIRTGLYRLIAVHDRNLNLHFDPATEETAIPGSEFVAAGTSSLLMRFAPQKDAKPALFADTEKNRTEETGTIKGSCLA DARWLIIEAKALNSSKVWRITAAPTQKGLFRFTFASLPEGDYTISAFIPSGNRKPDAHITWSPGKLDPFTPSDPFGLYPK AVHVRPGWDAETIDFTISAPDR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37731; Mature: 37731
Theoretical pI: Translated: 7.23; Mature: 7.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDRPPSGGPVDAAPLQVIFSDPLTGATKTSPKIIRLSFTHAIALKELQKSIFFTPRISNY CCCCCCCCCCCCCCEEEEEECCCCCCCCCCCEEEEEEHHHHHHHHHHHHHEEECCCCCCE DIFVHGREAEIRIYEPLQDDRTYSVMIRRQLSDYRGATLSTPWTLSFATGPVIDNGSLSG EEEEECCCCEEEEECCCCCCCEEEEEEEHHHHHCCCCEECCCEEEEEECCCEEECCCCCC RVFNADLSPAENALIMLYRKAASGTDPDYVVQTDQTGAFRLDHIRTGLYRLIAVHDRNLN EEEECCCCCCCCEEEEEEEECCCCCCCCEEEEECCCCCEEHHHHHHCEEEEEEEECCCEE LHFDPATEETAIPGSEFVAAGTSSLLMRFAPQKDAKPALFADTEKNRTEETGTIKGSCLA EEECCCCCCCCCCCCCEEECCCHHHHEEECCCCCCCCCEEECCCCCCCCCCCCEEEEEEC DARWLIIEAKALNSSKVWRITAAPTQKGLFRFTFASLPEGDYTISAFIPSGNRKPDAHIT CCEEEEEEEEECCCCEEEEEEECCCCCCEEEEEEECCCCCCEEEEEEECCCCCCCCCEEE WSPGKLDPFTPSDPFGLYPKAVHVRPGWDAETIDFTISAPDR ECCCCCCCCCCCCCCCCCCCEEEECCCCCCCEEEEEEECCCC >Mature Secondary Structure MDRPPSGGPVDAAPLQVIFSDPLTGATKTSPKIIRLSFTHAIALKELQKSIFFTPRISNY CCCCCCCCCCCCCCEEEEEECCCCCCCCCCCEEEEEEHHHHHHHHHHHHHEEECCCCCCE DIFVHGREAEIRIYEPLQDDRTYSVMIRRQLSDYRGATLSTPWTLSFATGPVIDNGSLSG EEEEECCCCEEEEECCCCCCCEEEEEEEHHHHHCCCCEECCCEEEEEECCCEEECCCCCC RVFNADLSPAENALIMLYRKAASGTDPDYVVQTDQTGAFRLDHIRTGLYRLIAVHDRNLN EEEECCCCCCCCEEEEEEEECCCCCCCCEEEEECCCCCEEHHHHHHCEEEEEEEECCCEE LHFDPATEETAIPGSEFVAAGTSSLLMRFAPQKDAKPALFADTEKNRTEETGTIKGSCLA EEECCCCCCCCCCCCCEEECCCHHHHEEECCCCCCCCCEEECCCCCCCCCCCCEEEEEEC DARWLIIEAKALNSSKVWRITAAPTQKGLFRFTFASLPEGDYTISAFIPSGNRKPDAHIT CCEEEEEEEEECCCCEEEEEEECCCCCCEEEEEEECCCCCCEEEEEEECCCCCCCCCEEE WSPGKLDPFTPSDPFGLYPKAVHVRPGWDAETIDFTISAPDR ECCCCCCCCCCCCCCCCCCCEEEECCCCCCCEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA