| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119357988
Identifier: 119357988
GI number: 119357988
Start: 2536632
End: 2537900
Strand: Direct
Name: 119357988
Synonym: Cpha266_2208
Alternate gene names: NA
Gene position: 2536632-2537900 (Clockwise)
Preceding gene: 119357984
Following gene: 119357989
Centisome position: 80.94
GC content: 41.77
Gene sequence:
>1269_bases ATGCTAATCGAATTCAGCGTAACCAACTTCAAATCGATTCATTCAAAGCAAACCTTGAGTATGGTTGCCAGCTCTATCTG TGAGCTACAGGAACAAAACTGCTTCATGACGGCTGAAAAAGGCTTACCGCCTCTACTACGTTCTATAGTTATTTATGGCC CTAATGCCTCCGGAAAAAGCAACCTTCTTGAAACAATGAATTTCATGGAGAACTTTGTTACTGAATCATCCAAGGAGGGG CAGGAGGGGGAGTCAATCGATGTCAAGCCATTTCTCTTCAATAGTATTAGCCAAACTGAACCGAGTGAATTTGAAGTACT ATTTCTACAAGAAGGAATTCGTTACCAGTATGGTTTTGCCGTCAACTCTACGCGAGTCACTCACGAATGGCTGATCGCTT ATCCAGAAGGCCGTTCCCAGCGCTGGTTTGAACGGGAATACAATACTACCACCTTGCAAGAAAACTGGTATTTCGGCAGT AAGCTCAAAGGCAATAAAACATTACTACAACAGGCAACGCGCAGTAACGCCCTGTTTCTTTCTACTGCAGTTCAACTCAA CAATGAACAGTTGAAACCTGTTTACAATTGGTTCCATCAGAAGCTGCGGACCATCCCTATGACAAGCATTTTCTCGTCAT ATTCGACCACAATGTGTAAGACTGACATAGGTAGAAAGAGAGTATTAGAACTGCTGAACGCTGCTGATCTAAGTATTACT GATCTAAAAGTTGAAATCAAGAAGTTTGCCTCAACTGATGTACCATCTGATATACCAGAGCCTCTTAAGGAATATCTTTG TAAGGCATTAGATGGTAAAGAACAGCCAGAGATTAAATTTTTGCACACGATGGTAGGATCAAATGAATTAGTTCCGCTTG AACTTTCTGAAGAATCAGTCGGAACAAGAAAGCTGTTTGGTCTTGCGGGTCATTGGCTTAATGTGATCGACAAAGGATGC GTGCTGTTTGTAGACGAACTGAACAACAGCATGCACCCCAAGATGGTACGTTTTCTCATTAGCATGATCAACAATCCAGA GATTAACAAAAATAATGCCCAATTGATCTTCTCGACACATGACACATCTTTACTCGATAACGAACTGTTCCGCCGTGATC AAATTTGGTTCACAGAAAAGGATGCTTCCAATTCCACAAAGCTGTATCCGCTGTCTGACTTTACCCCACGAAAAAATGAG GCTCTGGAAAAAGGATATCTAAATGGACGATACGGTGCTATTCCATACATTGGCGAAATAAGGTTCTGA
Upstream 100 bases:
>100_bases TATTATTTGTATGTATGGATAAAATCTTTAAATTAAAGCTTAGTTTTTGCATATAAAATGCAATATATGGCTCAAGATTT AAACCAGAATTGAATCAGTC
Downstream 100 bases:
>100_bases TGGGCTCTGATAATATTTTTTATAAACGCAAACAGAGACAAGCGGCGTCTCTGGAGCGGAAAAATCCCAAAAAATCGTCC TATGACAGGGTGCTTATCGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 422; Mature: 422
Protein sequence:
>422_residues MLIEFSVTNFKSIHSKQTLSMVASSICELQEQNCFMTAEKGLPPLLRSIVIYGPNASGKSNLLETMNFMENFVTESSKEG QEGESIDVKPFLFNSISQTEPSEFEVLFLQEGIRYQYGFAVNSTRVTHEWLIAYPEGRSQRWFEREYNTTTLQENWYFGS KLKGNKTLLQQATRSNALFLSTAVQLNNEQLKPVYNWFHQKLRTIPMTSIFSSYSTTMCKTDIGRKRVLELLNAADLSIT DLKVEIKKFASTDVPSDIPEPLKEYLCKALDGKEQPEIKFLHTMVGSNELVPLELSEESVGTRKLFGLAGHWLNVIDKGC VLFVDELNNSMHPKMVRFLISMINNPEINKNNAQLIFSTHDTSLLDNELFRRDQIWFTEKDASNSTKLYPLSDFTPRKNE ALEKGYLNGRYGAIPYIGEIRF
Sequences:
>Translated_422_residues MLIEFSVTNFKSIHSKQTLSMVASSICELQEQNCFMTAEKGLPPLLRSIVIYGPNASGKSNLLETMNFMENFVTESSKEG QEGESIDVKPFLFNSISQTEPSEFEVLFLQEGIRYQYGFAVNSTRVTHEWLIAYPEGRSQRWFEREYNTTTLQENWYFGS KLKGNKTLLQQATRSNALFLSTAVQLNNEQLKPVYNWFHQKLRTIPMTSIFSSYSTTMCKTDIGRKRVLELLNAADLSIT DLKVEIKKFASTDVPSDIPEPLKEYLCKALDGKEQPEIKFLHTMVGSNELVPLELSEESVGTRKLFGLAGHWLNVIDKGC VLFVDELNNSMHPKMVRFLISMINNPEINKNNAQLIFSTHDTSLLDNELFRRDQIWFTEKDASNSTKLYPLSDFTPRKNE ALEKGYLNGRYGAIPYIGEIRF >Mature_422_residues MLIEFSVTNFKSIHSKQTLSMVASSICELQEQNCFMTAEKGLPPLLRSIVIYGPNASGKSNLLETMNFMENFVTESSKEG QEGESIDVKPFLFNSISQTEPSEFEVLFLQEGIRYQYGFAVNSTRVTHEWLIAYPEGRSQRWFEREYNTTTLQENWYFGS KLKGNKTLLQQATRSNALFLSTAVQLNNEQLKPVYNWFHQKLRTIPMTSIFSSYSTTMCKTDIGRKRVLELLNAADLSIT DLKVEIKKFASTDVPSDIPEPLKEYLCKALDGKEQPEIKFLHTMVGSNELVPLELSEESVGTRKLFGLAGHWLNVIDKGC VLFVDELNNSMHPKMVRFLISMINNPEINKNNAQLIFSTHDTSLLDNELFRRDQIWFTEKDASNSTKLYPLSDFTPRKNE ALEKGYLNGRYGAIPYIGEIRF
Specific function: Unknown
COG id: COG1106
COG function: function code R; Predicted ATPases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48313; Mature: 48313
Theoretical pI: Translated: 5.97; Mature: 5.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLIEFSVTNFKSIHSKQTLSMVASSICELQEQNCFMTAEKGLPPLLRSIVIYGPNASGKS CEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCHHHHCEEEECCCCCCHH NLLETMNFMENFVTESSKEGQEGESIDVKPFLFNSISQTEPSEFEVLFLQEGIRYQYGFA HHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHCCCCCCCCCCEEEEEEECCCCEEEEEE VNSTRVTHEWLIAYPEGRSQRWFEREYNTTTLQENWYFGSKLKGNKTLLQQATRSNALFL ECCCEEEEEEEEECCCCCCCCHHHHCCCCEEEECCCEECCCCCCCHHHHHHHHCCCEEEE STAVQLNNEQLKPVYNWFHQKLRTIPMTSIFSSYSTTMCKTDIGRKRVLELLNAADLSIT EEEEECCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCEEE DLKVEIKKFASTDVPSDIPEPLKEYLCKALDGKEQPEIKFLHTMVGSNELVPLELSEESV HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCEEEEEECCCCC GTRKLFGLAGHWLNVIDKGCVLFVDELNNSMHPKMVRFLISMINNPEINKNNAQLIFSTH CHHHHHHHHHHHHHHHCCCCEEEEEHHCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEEEC DTSLLDNELFRRDQIWFTEKDASNSTKLYPLSDFTPRKNEALEKGYLNGRYGAIPYIGEI CCHHHHHHHHHHCCCEEEECCCCCCCEEEECCCCCCCHHHHHHHCCCCCCCCCCCCEECC RF CC >Mature Secondary Structure MLIEFSVTNFKSIHSKQTLSMVASSICELQEQNCFMTAEKGLPPLLRSIVIYGPNASGKS CEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCHHHHCEEEECCCCCCHH NLLETMNFMENFVTESSKEGQEGESIDVKPFLFNSISQTEPSEFEVLFLQEGIRYQYGFA HHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHCCCCCCCCCCEEEEEEECCCCEEEEEE VNSTRVTHEWLIAYPEGRSQRWFEREYNTTTLQENWYFGSKLKGNKTLLQQATRSNALFL ECCCEEEEEEEEECCCCCCCCHHHHCCCCEEEECCCEECCCCCCCHHHHHHHHCCCEEEE STAVQLNNEQLKPVYNWFHQKLRTIPMTSIFSSYSTTMCKTDIGRKRVLELLNAADLSIT EEEEECCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCEEE DLKVEIKKFASTDVPSDIPEPLKEYLCKALDGKEQPEIKFLHTMVGSNELVPLELSEESV HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCEEEEEECCCCC GTRKLFGLAGHWLNVIDKGCVLFVDELNNSMHPKMVRFLISMINNPEINKNNAQLIFSTH CHHHHHHHHHHHHHHHCCCCEEEEEHHCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEEEC DTSLLDNELFRRDQIWFTEKDASNSTKLYPLSDFTPRKNEALEKGYLNGRYGAIPYIGEI CCHHHHHHHHHHCCCEEEECCCCCCCEEEECCCCCCCHHHHHHHCCCCCCCCCCCCEECC RF CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA